| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610402
Identifier: 120610402
GI number: 120610402
Start: 1879411
End: 1879734
Strand: Reverse
Name: 120610402
Synonym: Aave_1719
Alternate gene names: NA
Gene position: 1879734-1879411 (Counterclockwise)
Preceding gene: 120610403
Following gene: 120610400
Centisome position: 35.12
GC content: 60.49
Gene sequence:
>324_bases ATGAACAAGTTCGCAGGCACTGATGAAGCATGGGAGGAGCGCCAACTGGGCGCTGACGCCGACCACGCAGAGGTGGCCGG TGCGGAGCATATGGCAGCGCTGGACGAGGCGATGGGCATGCAGTCCATCTCGATCCGACTGCCCAAAGGAATGATCGACG CATACAAGCTGATCGGCGCTCACCATGGCGTCGGGTACCAGCCTCTGATGCGAGACATCCTGCAACGCTTCATCCCTGAA GGGTTGAAGGAAGTGCTGGACCACCACCAGCAAAAGGCCACACAAGCAGAAGGCCGCATTGAGGAGCTGCGGAAGGCGGC CTGA
Upstream 100 bases:
>100_bases CGTATATACAAAGAGGCTCAACGATCCATCTGAGGACGTGCTATGAGCCCAACCAAAACGAGATCAGCATTTACACGAGT CACACCAAACGGAGAGTCAA
Downstream 100 bases:
>100_bases TGCCGTACCTTGCCCCAGAAGGCCCGCTTCGCGCGGGCCTTTTTCATGGTCGAATAACCGAACGGTAATTGCTCCACGAT AACGGGGGCTGTGCCCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MNKFAGTDEAWEERQLGADADHAEVAGAEHMAALDEAMGMQSISIRLPKGMIDAYKLIGAHHGVGYQPLMRDILQRFIPE GLKEVLDHHQQKATQAEGRIEELRKAA
Sequences:
>Translated_107_residues MNKFAGTDEAWEERQLGADADHAEVAGAEHMAALDEAMGMQSISIRLPKGMIDAYKLIGAHHGVGYQPLMRDILQRFIPE GLKEVLDHHQQKATQAEGRIEELRKAA >Mature_107_residues MNKFAGTDEAWEERQLGADADHAEVAGAEHMAALDEAMGMQSISIRLPKGMIDAYKLIGAHHGVGYQPLMRDILQRFIPE GLKEVLDHHQQKATQAEGRIEELRKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11862; Mature: 11862
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKFAGTDEAWEERQLGADADHAEVAGAEHMAALDEAMGMQSISIRLPKGMIDAYKLIGA CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHH HHGVGYQPLMRDILQRFIPEGLKEVLDHHQQKATQAEGRIEELRKAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKFAGTDEAWEERQLGADADHAEVAGAEHMAALDEAMGMQSISIRLPKGMIDAYKLIGA CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHH HHGVGYQPLMRDILQRFIPEGLKEVLDHHQQKATQAEGRIEELRKAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA