Click here to switch to the map view.

The map label for this gene is 120610364

Identifier: 120610364

GI number: 120610364

Start: 1839192

End: 1840031

Strand: Reverse

Name: 120610364

Synonym: Aave_1681

Alternate gene names: NA

Gene position: 1840031-1839192 (Counterclockwise)

Preceding gene: 120610365

Following gene: 120610363

Centisome position: 34.38

GC content: 65.6

Gene sequence:

>840_bases
ATGGACATGAATGAAACCAAGACCGAAACCGCGGCGCACGAAGCCATCGCAGCCAGCCACCAGCACGTGCGCGACGTGTA
CGGCACGCCGCTGGTAATCCTGCCCGAAGGCTTCAAAGTCGGCCTGATACCCGAGCTGCTGCCAGCCCCAACCCGCAAGA
AGGGCACGACGGTCCTGAACGATGCAGCGTCGTTCGTGGCCGTGGTGAACGACCAGAAGGGCGAGGACACCCGGCTGTTC
AGCACCATCGACCCGCCCACCTTCACGGCGGTTTTCAACCACCACGCGGCCGAGGCTGGCTGGGGCGATCACCGCGCGCG
GTACAACGCGCCGCTGGCCCCCGAGTGGGCAGCCTGGACCGGCATGGACGGCAAGAAGCAGAACCAGGTGGACCTCGCCC
AGTTCATCGAGAACAACCTGGTGGACGTGGCATTCCTGGAACCCAAGGACGGGCACCCCGGCAGCCCGGACGGTTCCACG
CTGCTGGAGGTGTGCCGCACGCTCGAGGCCAAGAAGAAGGTGGACTTCAAGTCCGCGATCCGTCTGGCCGATGGCAGCAC
GCAATTCACGTACGACGAGTACGTGCAGGGCAGCGCGCTCCAGGGCCAGCTTCAGGTGCCCGAGCAGTTCAGCCTCGCCA
TTCCCGTGTTCGAGAACGGCGCGAAGTGGCGCGTGGACGTGCGGCTGCGCTACCGCATTCAGGACGGCGGCAACCTGGTG
ATGTGGCTGGAGCTGATCCGCCCGCAGAAGGTGATCGAGGGCGCGGTGCTGGAGCTGCGCGAGCAGATCGCCAAGGACAC
CGGCCTGCAGATCCTGAACGGCATCCCCAACGCCGGATAA

Upstream 100 bases:

>100_bases
GCGTAGCGCCCGAGGCGAAGCAGCCCCTGCGCGCAGTCACCCACTGATCCCGTCACCCACTGATCCCGTCTCCCCCACCC
GTCCATTTCAAGGAGAACCC

Downstream 100 bases:

>100_bases
GCCAGGCCCATGAGCACAGGGCGCCGCGTGCGCCCCATGCTCAATTCAGTAACTCGCGCTCCCTTACATTTAGTAGTTAA
TGGTCCGGTCACGAATGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MDMNETKTETAAHEAIAASHQHVRDVYGTPLVILPEGFKVGLIPELLPAPTRKKGTTVLNDAASFVAVVNDQKGEDTRLF
STIDPPTFTAVFNHHAAEAGWGDHRARYNAPLAPEWAAWTGMDGKKQNQVDLAQFIENNLVDVAFLEPKDGHPGSPDGST
LLEVCRTLEAKKKVDFKSAIRLADGSTQFTYDEYVQGSALQGQLQVPEQFSLAIPVFENGAKWRVDVRLRYRIQDGGNLV
MWLELIRPQKVIEGAVLELREQIAKDTGLQILNGIPNAG

Sequences:

>Translated_279_residues
MDMNETKTETAAHEAIAASHQHVRDVYGTPLVILPEGFKVGLIPELLPAPTRKKGTTVLNDAASFVAVVNDQKGEDTRLF
STIDPPTFTAVFNHHAAEAGWGDHRARYNAPLAPEWAAWTGMDGKKQNQVDLAQFIENNLVDVAFLEPKDGHPGSPDGST
LLEVCRTLEAKKKVDFKSAIRLADGSTQFTYDEYVQGSALQGQLQVPEQFSLAIPVFENGAKWRVDVRLRYRIQDGGNLV
MWLELIRPQKVIEGAVLELREQIAKDTGLQILNGIPNAG
>Mature_279_residues
MDMNETKTETAAHEAIAASHQHVRDVYGTPLVILPEGFKVGLIPELLPAPTRKKGTTVLNDAASFVAVVNDQKGEDTRLF
STIDPPTFTAVFNHHAAEAGWGDHRARYNAPLAPEWAAWTGMDGKKQNQVDLAQFIENNLVDVAFLEPKDGHPGSPDGST
LLEVCRTLEAKKKVDFKSAIRLADGSTQFTYDEYVQGSALQGQLQVPEQFSLAIPVFENGAKWRVDVRLRYRIQDGGNLV
MWLELIRPQKVIEGAVLELREQIAKDTGLQILNGIPNAG

Specific function: Unknown

COG id: COG5532

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30708; Mature: 30708

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMNETKTETAAHEAIAASHQHVRDVYGTPLVILPEGFKVGLIPELLPAPTRKKGTTVLN
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEECCCHHHCCCCCCCCCCEEHH
DAASFVAVVNDQKGEDTRLFSTIDPPTFTAVFNHHAAEAGWGDHRARYNAPLAPEWAAWT
HHHHEEEEECCCCCCCCEEEEECCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCC
GMDGKKQNQVDLAQFIENNLVDVAFLEPKDGHPGSPDGSTLLEVCRTLEAKKKVDFKSAI
CCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHE
RLADGSTQFTYDEYVQGSALQGQLQVPEQFSLAIPVFENGAKWRVDVRLRYRIQDGGNLV
EECCCCCCCCHHHHHCCCCCCCCEECCCCCEEEEEEEECCCEEEEEEEEEEEECCCCCEE
MWLELIRPQKVIEGAVLELREQIAKDTGLQILNGIPNAG
EEEEHHCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCC
>Mature Secondary Structure
MDMNETKTETAAHEAIAASHQHVRDVYGTPLVILPEGFKVGLIPELLPAPTRKKGTTVLN
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEECCCHHHCCCCCCCCCCEEHH
DAASFVAVVNDQKGEDTRLFSTIDPPTFTAVFNHHAAEAGWGDHRARYNAPLAPEWAAWT
HHHHEEEEECCCCCCCCEEEEECCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCC
GMDGKKQNQVDLAQFIENNLVDVAFLEPKDGHPGSPDGSTLLEVCRTLEAKKKVDFKSAI
CCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHE
RLADGSTQFTYDEYVQGSALQGQLQVPEQFSLAIPVFENGAKWRVDVRLRYRIQDGGNLV
EECCCCCCCCHHHHHCCCCCCCCEECCCCCEEEEEEEECCCEEEEEEEEEEEECCCCCEE
MWLELIRPQKVIEGAVLELREQIAKDTGLQILNGIPNAG
EEEEHHCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA