| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610357
Identifier: 120610357
GI number: 120610357
Start: 1833191
End: 1833607
Strand: Reverse
Name: 120610357
Synonym: Aave_1674
Alternate gene names: NA
Gene position: 1833607-1833191 (Counterclockwise)
Preceding gene: 120610358
Following gene: 120610356
Centisome position: 34.26
GC content: 67.87
Gene sequence:
>417_bases ATGAGCACCGACACCACCCTGGCGCCGTGCCCGTTCTGCGGCGGCGAGCCTTCAATCGTGGAGCGCCCCGACAACATAGA CGGCACGGAGTTCTTCTACGCCATGGCCTGCTATTGCGGCGGGTACTCGGCACGGGCGCACCAGATGGCCATACGAAAGA ATCCGGAGCAGGCGAAGGCGGATGCCATCGCCGCCTGGAACCGACGCGCTCTGGCGCCGGCCGTCGAAGAGTACGAGCAG GCTCTGGCACTGCTGGCCGGGCTGCACCCCGGCCTCACGATCGACGGGCCTCCGTTGGAGGTCGCGACGCGCATCTTCGA TGCCGTCATGGCAGACCGGGCACACCACGAGCAGGAGATCCGCCGCCAGGAGCGCGCCCTGGAATCGATGCGCGCGCACG CCTGGCGCAGATCATGA
Upstream 100 bases:
>100_bases CGCAGATGACCGTCTCCGGGCTAACGTCGGAAGACCAGGCCCGCGCCGCCATGGACCACATGCAGCGCCTCTTCTGCGGC GCGGAACAGGAGCCCATCCA
Downstream 100 bases:
>100_bases AGAGCCCCACAAAGGGCCGCCCTCGCCTCACCTTCGCCGACCTGGCCCGGGTCCGGTGCATGGTCTGCGACAAGGACAAG ACCGCCGAGGGAGCCCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MSTDTTLAPCPFCGGEPSIVERPDNIDGTEFFYAMACYCGGYSARAHQMAIRKNPEQAKADAIAAWNRRALAPAVEEYEQ ALALLAGLHPGLTIDGPPLEVATRIFDAVMADRAHHEQEIRRQERALESMRAHAWRRS
Sequences:
>Translated_138_residues MSTDTTLAPCPFCGGEPSIVERPDNIDGTEFFYAMACYCGGYSARAHQMAIRKNPEQAKADAIAAWNRRALAPAVEEYEQ ALALLAGLHPGLTIDGPPLEVATRIFDAVMADRAHHEQEIRRQERALESMRAHAWRRS >Mature_137_residues STDTTLAPCPFCGGEPSIVERPDNIDGTEFFYAMACYCGGYSARAHQMAIRKNPEQAKADAIAAWNRRALAPAVEEYEQA LALLAGLHPGLTIDGPPLEVATRIFDAVMADRAHHEQEIRRQERALESMRAHAWRRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15296; Mature: 15165
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDTTLAPCPFCGGEPSIVERPDNIDGTEFFYAMACYCGGYSARAHQMAIRKNPEQAKA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH DAIAAWNRRALAPAVEEYEQALALLAGLHPGLTIDGPPLEVATRIFDAVMADRAHHEQEI HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RRQERALESMRAHAWRRS HHHHHHHHHHHHHHHCCC >Mature Secondary Structure STDTTLAPCPFCGGEPSIVERPDNIDGTEFFYAMACYCGGYSARAHQMAIRKNPEQAKA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH DAIAAWNRRALAPAVEEYEQALALLAGLHPGLTIDGPPLEVATRIFDAVMADRAHHEQEI HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RRQERALESMRAHAWRRS HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA