| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610332
Identifier: 120610332
GI number: 120610332
Start: 1807990
End: 1809078
Strand: Reverse
Name: 120610332
Synonym: Aave_1649
Alternate gene names: NA
Gene position: 1809078-1807990 (Counterclockwise)
Preceding gene: 120610333
Following gene: 120610331
Centisome position: 33.8
GC content: 74.84
Gene sequence:
>1089_bases ATGACCACCGCCCCGCCCCTTTCCTGGGACGTCTTCTGCCGCGTCATCGACAACTTCGGCGACATCGGTGTCTGCTGGCG CCTCGCGGCCCAGCTCGGCGCGCTCGGCCACCGCGTGCGGCTGTGGACCGACGACGCCACCGCCCTCGCCTGGATGGCGC CGGGAGGCGCGCCGGACGTGCAGGTGCTGCCCTGGCCCGCCGCCGGGCCGGTGTCCGCCGGGCCGGGCGACGTGCTCGTC GAGGCCTTCGGCTGCGACATTCCCGAAGCCTTCCTCGCCCGCCTGCCCGCCGCCGGCGAGCCGCAGGCCGCACGGCGCCC CGTGTGGATCAACCTGGAATACCTTTCGGCCGAGGCGTACGTCGAGCGCAGCCACCGCCTGCCCTCTCCGCTCTTCTCCG GTCCCGGCGCCGGGCGCACCCGCTGGTTCTTCTACCCGGGCTTCACGCCGCGCACGGGCGGCCTGCTGCGCGAGCCGGAC CTGGCCGCGCGCCAGGCGGCCTTCGACCGCACCGCCTGGCGTGCCCGCCATGGCGTGGCCCCGGACGCGCTGGCCGTCTC GCTGTTCTGCTATGAGCCCGCCGGCCTGCCCGCCCTGCTGCGCCGCCTCTGCGAAGAGCCGCGCGCCCACCTGCTGGCCA CCCCGGGGCGCGCCACGGCCGCCGTGCGCGCCGCGCTGGCGGACGGCCCGGCGGCGGATGCCCCGCCGATGGTCACCTGC CTGCCGCATTGCCCTCAGCCCGGATTCGACGAGATGCTGTGGGCCTGCGACCTGAATGCCGTGCGCGGCGAGGATTCGCT GGTGCGCGCGCTCTGGGCCGGCCAGCCCTTCGTCTGGCACATCTACCCGCAGGACGACGGCGCGCACCACGCCAAGCTCG ACGCCTTCCTCGACTGGCTGCGGGCGCCGGCCGCGCTGCGGCATTTCCACCACGCCTGGAACGGCATCGCGGAACCGGCC GCCCTGCCCGCCCTGACGGCCTCCCACCTTGCCGAGTGGCGCGAATGCGTGCAGGCGGCGCGCGGCCGGCTGTTCGCGCA GGACGACCTCGTGACGCAGTTGCTCGGCTTCGTCCAGGAAAAAAGCTAA
Upstream 100 bases:
>100_bases GCCAGCTGTCGCTGTGCGTGCGGGCGGGCGACACGCTCTCCAGCGCGGCGCGCCTGCTCGTGGACCACCTGCGCGCGGCG CCGCCCGCGGAGGCCGCGCC
Downstream 100 bases:
>100_bases AATCCGGGGTTTTGCGCCCAAAAGGGGCGGCACGCGTAGTTCCGCATGCCGGCCGGCGCATCCCCCCGCCGCGGAACCTG CCCGGCGCCCTTGCCGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MTTAPPLSWDVFCRVIDNFGDIGVCWRLAAQLGALGHRVRLWTDDATALAWMAPGGAPDVQVLPWPAAGPVSAGPGDVLV EAFGCDIPEAFLARLPAAGEPQAARRPVWINLEYLSAEAYVERSHRLPSPLFSGPGAGRTRWFFYPGFTPRTGGLLREPD LAARQAAFDRTAWRARHGVAPDALAVSLFCYEPAGLPALLRRLCEEPRAHLLATPGRATAAVRAALADGPAADAPPMVTC LPHCPQPGFDEMLWACDLNAVRGEDSLVRALWAGQPFVWHIYPQDDGAHHAKLDAFLDWLRAPAALRHFHHAWNGIAEPA ALPALTASHLAEWRECVQAARGRLFAQDDLVTQLLGFVQEKS
Sequences:
>Translated_362_residues MTTAPPLSWDVFCRVIDNFGDIGVCWRLAAQLGALGHRVRLWTDDATALAWMAPGGAPDVQVLPWPAAGPVSAGPGDVLV EAFGCDIPEAFLARLPAAGEPQAARRPVWINLEYLSAEAYVERSHRLPSPLFSGPGAGRTRWFFYPGFTPRTGGLLREPD LAARQAAFDRTAWRARHGVAPDALAVSLFCYEPAGLPALLRRLCEEPRAHLLATPGRATAAVRAALADGPAADAPPMVTC LPHCPQPGFDEMLWACDLNAVRGEDSLVRALWAGQPFVWHIYPQDDGAHHAKLDAFLDWLRAPAALRHFHHAWNGIAEPA ALPALTASHLAEWRECVQAARGRLFAQDDLVTQLLGFVQEKS >Mature_361_residues TTAPPLSWDVFCRVIDNFGDIGVCWRLAAQLGALGHRVRLWTDDATALAWMAPGGAPDVQVLPWPAAGPVSAGPGDVLVE AFGCDIPEAFLARLPAAGEPQAARRPVWINLEYLSAEAYVERSHRLPSPLFSGPGAGRTRWFFYPGFTPRTGGLLREPDL AARQAAFDRTAWRARHGVAPDALAVSLFCYEPAGLPALLRRLCEEPRAHLLATPGRATAAVRAALADGPAADAPPMVTCL PHCPQPGFDEMLWACDLNAVRGEDSLVRALWAGQPFVWHIYPQDDGAHHAKLDAFLDWLRAPAALRHFHHAWNGIAEPAA LPALTASHLAEWRECVQAARGRLFAQDDLVTQLLGFVQEKS
Specific function: Unknown
COG id: COG4394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39291; Mature: 39160
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAPPLSWDVFCRVIDNFGDIGVCWRLAAQLGALGHRVRLWTDDATALAWMAPGGAPDV CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCC QVLPWPAAGPVSAGPGDVLVEAFGCDIPEAFLARLPAAGEPQAARRPVWINLEYLSAEAY EEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCHHCCCEEEEEEEHHHHHH VERSHRLPSPLFSGPGAGRTRWFFYPGFTPRTGGLLREPDLAARQAAFDRTAWRARHGVA HHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC PDALAVSLFCYEPAGLPALLRRLCEEPRAHLLATPGRATAAVRAALADGPAADAPPMVTC CHHHEEEEEEECCCCHHHHHHHHHHCCHHCEEECCCHHHHHHHHHHHCCCCCCCCCCEEE LPHCPQPGFDEMLWACDLNAVRGEDSLVRALWAGQPFVWHIYPQDDGAHHAKLDAFLDWL CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHH RAPAALRHFHHAWNGIAEPAALPALTASHLAEWRECVQAARGRLFAQDDLVTQLLGFVQE HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHHC KS CC >Mature Secondary Structure TTAPPLSWDVFCRVIDNFGDIGVCWRLAAQLGALGHRVRLWTDDATALAWMAPGGAPDV CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCC QVLPWPAAGPVSAGPGDVLVEAFGCDIPEAFLARLPAAGEPQAARRPVWINLEYLSAEAY EEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCHHCCCEEEEEEEHHHHHH VERSHRLPSPLFSGPGAGRTRWFFYPGFTPRTGGLLREPDLAARQAAFDRTAWRARHGVA HHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC PDALAVSLFCYEPAGLPALLRRLCEEPRAHLLATPGRATAAVRAALADGPAADAPPMVTC CHHHEEEEEEECCCCHHHHHHHHHHCCHHCEEECCCHHHHHHHHHHHCCCCCCCCCCEEE LPHCPQPGFDEMLWACDLNAVRGEDSLVRALWAGQPFVWHIYPQDDGAHHAKLDAFLDWL CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHH RAPAALRHFHHAWNGIAEPAALPALTASHLAEWRECVQAARGRLFAQDDLVTQLLGFVQE HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHHC KS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA