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The map label for this gene is ytfE [C]

Identifier: 120610256

GI number: 120610256

Start: 1735022

End: 1735771

Strand: Reverse

Name: ytfE [C]

Synonym: Aave_1571

Alternate gene names: 120610256

Gene position: 1735771-1735022 (Counterclockwise)

Preceding gene: 120610258

Following gene: 120610255

Centisome position: 32.43

GC content: 72.13

Gene sequence:

>750_bases
ATGAATGCACGCCTTCCCGATGCCCTGCCTGCCGCCACGATCGACTCCCGGCAGACGCTGGGCCAGATCGCCGTGTCGCT
GCCCGGCGCCACGGCGGTGTTCCGCAGGCTGCACCTGGATTTCTGCTGGGGCGGGCAGGTGAGCCTGGCGCAGGCCGCGG
CCGACAAGGGCCTGGACCTCGCCGCGCTGCAGGCCGAGCTTGCCGCCCTGCAACGCGATGGCGCCGCCCCCGATCCGGCA
CTGGACACCGGCACGCTGCTCGATCACATCGTGGCGCGCTACCACGAGGTCCATCGCGCGCAGTTGCCCGAACTGATCCG
CATGGCGCGGCGCGTGGAGGCGGTGCACCGGGAGCATCCGCGGGTGCCTGCGGGCCTGGCCGACCTGCTGGAGGCCACGC
AGGGGGAACTGCTGTCGCACATGCTCAAGGAAGAGCGCGTGCTGTTTCCCATGCTCCGGGGCGGCGGCGACGCCTTCGCG
GGCCCGCCCATCGCCATGATGCGCGCAGAGCACACGGAGCACGGAGAGACGCTGGAACGGCTCGCGGCCCTCACCGGGCA
GATGACGCCGCCGCCGGGCGCCTGCAACACGTGGCGCGCTCTCTACGCGGGGCTGGAGCAGTTCCGCGACGACCTCGTCG
AGCACATCCACCTGGAAAACAACGTGCTGTTCCCGCGCTTCGACGGCACGGCCGCCGCACCCCGGGGCTGCGGCGCGACT
GACGGTGCAGGCGCGTGCGGATGCCGCTGA

Upstream 100 bases:

>100_bases
GAGGCGCATGGCGTTTGCGTTGGATCAATCCGAAAGAGTCTCTTCGGATGAATCTTATTGCATAAAATATTCATCATAAA
TGAATCTTTAAGGAGCCCCC

Downstream 100 bases:

>100_bases
TACCGTGCAGGACAATCCACACCTTGCCATGCCCGACCAAGCCCCTCTTCCCGACACCATCGCCCCGTCCCCGCTGGACC
ACGGCGCCATCGCCGCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MNARLPDALPAATIDSRQTLGQIAVSLPGATAVFRRLHLDFCWGGQVSLAQAAADKGLDLAALQAELAALQRDGAAPDPA
LDTGTLLDHIVARYHEVHRAQLPELIRMARRVEAVHREHPRVPAGLADLLEATQGELLSHMLKEERVLFPMLRGGGDAFA
GPPIAMMRAEHTEHGETLERLAALTGQMTPPPGACNTWRALYAGLEQFRDDLVEHIHLENNVLFPRFDGTAAAPRGCGAT
DGAGACGCR

Sequences:

>Translated_249_residues
MNARLPDALPAATIDSRQTLGQIAVSLPGATAVFRRLHLDFCWGGQVSLAQAAADKGLDLAALQAELAALQRDGAAPDPA
LDTGTLLDHIVARYHEVHRAQLPELIRMARRVEAVHREHPRVPAGLADLLEATQGELLSHMLKEERVLFPMLRGGGDAFA
GPPIAMMRAEHTEHGETLERLAALTGQMTPPPGACNTWRALYAGLEQFRDDLVEHIHLENNVLFPRFDGTAAAPRGCGAT
DGAGACGCR
>Mature_249_residues
MNARLPDALPAATIDSRQTLGQIAVSLPGATAVFRRLHLDFCWGGQVSLAQAAADKGLDLAALQAELAALQRDGAAPDPA
LDTGTLLDHIVARYHEVHRAQLPELIRMARRVEAVHREHPRVPAGLADLLEATQGELLSHMLKEERVLFPMLRGGGDAFA
GPPIAMMRAEHTEHGETLERLAALTGQMTPPPGACNTWRALYAGLEQFRDDLVEHIHLENNVLFPRFDGTAAAPRGCGAT
DGAGACGCR

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=210, Percent_Identity=49.047619047619, Blast_Score=212, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 26703; Mature: 26703

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNARLPDALPAATIDSRQTLGQIAVSLPGATAVFRRLHLDFCWGGQVSLAQAAADKGLDL
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHH
AALQAELAALQRDGAAPDPALDTGTLLDHIVARYHEVHRAQLPELIRMARRVEAVHREHP
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RVPAGLADLLEATQGELLSHMLKEERVLFPMLRGGGDAFAGPPIAMMRAEHTEHGETLER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHH
LAALTGQMTPPPGACNTWRALYAGLEQFRDDLVEHIHLENNVLFPRFDGTAAAPRGCGAT
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCC
DGAGACGCR
CCCCCCCCC
>Mature Secondary Structure
MNARLPDALPAATIDSRQTLGQIAVSLPGATAVFRRLHLDFCWGGQVSLAQAAADKGLDL
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHH
AALQAELAALQRDGAAPDPALDTGTLLDHIVARYHEVHRAQLPELIRMARRVEAVHREHP
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RVPAGLADLLEATQGELLSHMLKEERVLFPMLRGGGDAFAGPPIAMMRAEHTEHGETLER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHH
LAALTGQMTPPPGACNTWRALYAGLEQFRDDLVEHIHLENNVLFPRFDGTAAAPRGCGAT
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCC
DGAGACGCR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA