Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610187
Identifier: 120610187
GI number: 120610187
Start: 1666633
End: 1666974
Strand: Reverse
Name: 120610187
Synonym: Aave_1501
Alternate gene names: NA
Gene position: 1666974-1666633 (Counterclockwise)
Preceding gene: 120610188
Following gene: 120610184
Centisome position: 31.14
GC content: 53.51
Gene sequence:
>342_bases ATGTCATTGAGTAAGCGAATTGCCGCTCTTCTACTTTGCCTCATTGGCTGCAGTACCGTGCTGGCGGCGCCTCCAGTCTG CCCCATTCGACAGAATCAGCCACTTCGCTACGTCGATGTATTCGATGGAGAACCATCGGGTCTCGCGACTCTTGAACCTG ACGTGGCGAAGAAGCGATACGGCCACTGGGTTCTCGGCTACATCTACGATGAGGGCCGGTTCGTTACCATGCGCTGCAAG TACGCGGACAAGCAAACGCATGATGTCAAGCTGGCGAGCCGTGTAGAGCAGTGCAGCTATTCCATCAATGCAAAGAATGT CCTTCGAGTAACTTGCAAATGA
Upstream 100 bases:
>100_bases GTATACGATCAATACGTTACTCCGCCAAGCCCTAAAGCTGTCGGCCCAAGAGTTCTCCGATGGGGCGCCCATGGCAACTC AAACAATGGGAACAACTTTT
Downstream 100 bases:
>100_bases ACGCGTACGCTGGCCGCCTTTTATTTCAAGCTCGGCAGCAACGGCCACAGCCCTTTGGCGATCCCTGCATGCCCAAGGGC TTTTTCCGACGATAAGGACT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MSLSKRIAALLLCLIGCSTVLAAPPVCPIRQNQPLRYVDVFDGEPSGLATLEPDVAKKRYGHWVLGYIYDEGRFVTMRCK YADKQTHDVKLASRVEQCSYSINAKNVLRVTCK
Sequences:
>Translated_113_residues MSLSKRIAALLLCLIGCSTVLAAPPVCPIRQNQPLRYVDVFDGEPSGLATLEPDVAKKRYGHWVLGYIYDEGRFVTMRCK YADKQTHDVKLASRVEQCSYSINAKNVLRVTCK >Mature_112_residues SLSKRIAALLLCLIGCSTVLAAPPVCPIRQNQPLRYVDVFDGEPSGLATLEPDVAKKRYGHWVLGYIYDEGRFVTMRCKY ADKQTHDVKLASRVEQCSYSINAKNVLRVTCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12664; Mature: 12533
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSKRIAALLLCLIGCSTVLAAPPVCPIRQNQPLRYVDVFDGEPSGLATLEPDVAKKRY CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCHHHHHHC GHWVLGYIYDEGRFVTMRCKYADKQTHDVKLASRVEQCSYSINAKNVLRVTCK CCEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEC >Mature Secondary Structure SLSKRIAALLLCLIGCSTVLAAPPVCPIRQNQPLRYVDVFDGEPSGLATLEPDVAKKRY CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCHHHHHHC GHWVLGYIYDEGRFVTMRCKYADKQTHDVKLASRVEQCSYSINAKNVLRVTCK CCEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA