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The map label for this gene is phoD [H]

Identifier: 120610098

GI number: 120610098

Start: 1550377

End: 1551966

Strand: Reverse

Name: phoD [H]

Synonym: Aave_1411

Alternate gene names: 120610098

Gene position: 1551966-1550377 (Counterclockwise)

Preceding gene: 120610099

Following gene: 120610097

Centisome position: 28.99

GC content: 75.6

Gene sequence:

>1590_bases
GTGTCATGGCGGCCTGACCCGGCCCGGCACGCCCCGGACCGCCGCACGCTGCTGCGGCTCGCCGCCGCGCTGGCGGTGCC
CGGCGCCCTGCCCCGCTGGGCATGGTCCTCACCCGGCTGGGGCAACGACCCGTTCGCGCTCGGCGTGGCGAGCGGAGACC
CGGCACCCGACGGCTTCGTGCTCTGGACCCGGCTGATGCCGCCGGAGCCCGGCGGCGCGGCCGGCCCGGCGACGGTGCGC
TGGGAGCTGGCGCACGACGACCGGTTCGGCCGCATCGTGCGCCGGGGCACGGCCACGGCCCTGCCGGAGCTGGCGCACAG
CGTGCACGTGGAACTGCGCGGGCTGGAGCCGGGGCGCTGGTATTTCTACCGTTTCCTGCATGGCGACGCCGCGAGCCCCA
CGGGCCGCACGCGCACCGCGCCATCCCTCGCGGACCCGAGGCCGCATCTGCGCCTGGGGTTCGCCTCGTGCCAGCGCTGG
GAGCACGGGCATTACGCCGCATGGAACGACGTCTGCCGCCATGCGCCCGACCTCGTGCTGTTCCTGGGCGACTACATCTA
CGAATACGCGAGCCCCGCCGATCCGGCGGGCCTGGCGCGCGTGCATGCGCTGCGCCACGCGCGGACGCTGGCCGACTTCC
GCGACCGCTATGCGCTGCACCGCAGCGACGCGGCCCTGCAGGCGGCCCATGCCGCAGCCCCCTGGGCCGTGACCTGGGAC
GACCATGAGGTGGAGAACGACTACGCCGGGCTGTCGGGGCGGGAGCCGGAGGCCGCCTTCGCCGACCTGCGGGCCGCGGC
CTACCAGGCGTTCTACGAGCACATGCCGCTGCGCGCGGCGACGCTGCAGGCCGGCGGCGGCTTCGGCGGCCTGCAGCTGT
GCCGGCGCCTCGCCTGGGGACGGCTGGCACGCCTGCACCTGCTCGACGCGCGCCAGTTCCGCAGCCGCCAGGCCTGCCGC
CCGCAGGGCTCAGGCGGTGCGGGTTCGGTGCTGCCCGCCACATGCGCAGAGCTGGCGGATCCGGCGCGCAGCTTTCTCGG
CATGGACCAGGAGCGCTGGCTGGATGCCGGGCTGGCGGAAGATGCCGCGCCAGCCGGCGACGGAAGCACCCCACGCTGGA
GCGTGATCGCGCAGCAGACGCTGTTCTCGCCGCGCCGCGCGCCCTCCGGACGGCAGGGCACCGACAGTTGGGACGGCTAT
CCCGCGGCGCGCGAACGGTTGCTCGCCTCCCTCGCGGGCAGGGCGCCGCGCAATACCGTGTTCCTCGGCGGGGACATCCA
CCAGAACTACGTCTGCGAGGTACGGGGCCCCGCGCCGGACGGCCCCGTGCTGGCCAGCGAGTTCTGCGGCACCTCCATCA
GCTCGCGGGCGGGCACCACGCAGGACCGGGTGGACGCCGTCGCGCGGCTCAACCCCCACGTGCTGCTGGCGCGCGGCGAC
CTGCGCGGCTGGGGCCTGGCCGACGTCACGCCGCAGCGCTGGACCACGGTGCTGCGGACGGTGGACGACCCGCTGCGGCC
CGACAGCGCCTGCTCCACCCTGGCACGCTTCGTGGTGGAAGACCGCCGTCCGGGCCCGGTACGGGACTGA

Upstream 100 bases:

>100_bases
AGCGCCGGCGTGGCGCAGGTCGCGCCGCAGGAGACGACGGTGGAAGCGATCCGGCGGGCGGACCAGGGGATGTACCTCGC
CAAGCGCTCGGGCAAGAACC

Downstream 100 bases:

>100_bases
CGTACCCGCTTGTAACAAAGCCGCCACGGGCCGGGGCGGGCCGATAGGATGCGCGGCGTTACCCCGAGATCATTCCACTG
CACGACGCGAAGGAGGCGTA

Product: alkaline phosphatase

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MSWRPDPARHAPDRRTLLRLAAALAVPGALPRWAWSSPGWGNDPFALGVASGDPAPDGFVLWTRLMPPEPGGAAGPATVR
WELAHDDRFGRIVRRGTATALPELAHSVHVELRGLEPGRWYFYRFLHGDAASPTGRTRTAPSLADPRPHLRLGFASCQRW
EHGHYAAWNDVCRHAPDLVLFLGDYIYEYASPADPAGLARVHALRHARTLADFRDRYALHRSDAALQAAHAAAPWAVTWD
DHEVENDYAGLSGREPEAAFADLRAAAYQAFYEHMPLRAATLQAGGGFGGLQLCRRLAWGRLARLHLLDARQFRSRQACR
PQGSGGAGSVLPATCAELADPARSFLGMDQERWLDAGLAEDAAPAGDGSTPRWSVIAQQTLFSPRRAPSGRQGTDSWDGY
PAARERLLASLAGRAPRNTVFLGGDIHQNYVCEVRGPAPDGPVLASEFCGTSISSRAGTTQDRVDAVARLNPHVLLARGD
LRGWGLADVTPQRWTTVLRTVDDPLRPDSACSTLARFVVEDRRPGPVRD

Sequences:

>Translated_529_residues
MSWRPDPARHAPDRRTLLRLAAALAVPGALPRWAWSSPGWGNDPFALGVASGDPAPDGFVLWTRLMPPEPGGAAGPATVR
WELAHDDRFGRIVRRGTATALPELAHSVHVELRGLEPGRWYFYRFLHGDAASPTGRTRTAPSLADPRPHLRLGFASCQRW
EHGHYAAWNDVCRHAPDLVLFLGDYIYEYASPADPAGLARVHALRHARTLADFRDRYALHRSDAALQAAHAAAPWAVTWD
DHEVENDYAGLSGREPEAAFADLRAAAYQAFYEHMPLRAATLQAGGGFGGLQLCRRLAWGRLARLHLLDARQFRSRQACR
PQGSGGAGSVLPATCAELADPARSFLGMDQERWLDAGLAEDAAPAGDGSTPRWSVIAQQTLFSPRRAPSGRQGTDSWDGY
PAARERLLASLAGRAPRNTVFLGGDIHQNYVCEVRGPAPDGPVLASEFCGTSISSRAGTTQDRVDAVARLNPHVLLARGD
LRGWGLADVTPQRWTTVLRTVDDPLRPDSACSTLARFVVEDRRPGPVRD
>Mature_528_residues
SWRPDPARHAPDRRTLLRLAAALAVPGALPRWAWSSPGWGNDPFALGVASGDPAPDGFVLWTRLMPPEPGGAAGPATVRW
ELAHDDRFGRIVRRGTATALPELAHSVHVELRGLEPGRWYFYRFLHGDAASPTGRTRTAPSLADPRPHLRLGFASCQRWE
HGHYAAWNDVCRHAPDLVLFLGDYIYEYASPADPAGLARVHALRHARTLADFRDRYALHRSDAALQAAHAAAPWAVTWDD
HEVENDYAGLSGREPEAAFADLRAAAYQAFYEHMPLRAATLQAGGGFGGLQLCRRLAWGRLARLHLLDARQFRSRQACRP
QGSGGAGSVLPATCAELADPARSFLGMDQERWLDAGLAEDAAPAGDGSTPRWSVIAQQTLFSPRRAPSGRQGTDSWDGYP
AARERLLASLAGRAPRNTVFLGGDIHQNYVCEVRGPAPDGPVLASEFCGTSISSRAGTTQDRVDAVARLNPHVLLARGDL
RGWGLADVTPQRWTTVLRTVDDPLRPDSACSTLARFVVEDRRPGPVRD

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 57653; Mature: 57522

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWRPDPARHAPDRRTLLRLAAALAVPGALPRWAWSSPGWGNDPFALGVASGDPAPDGFV
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEE
LWTRLMPPEPGGAAGPATVRWELAHDDRFGRIVRRGTATALPELAHSVHVELRGLEPGRW
EEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHEEEEEECCCCCCE
YFYRFLHGDAASPTGRTRTAPSLADPRPHLRLGFASCQRWEHGHYAAWNDVCRHAPDLVL
EEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHCCCCCCHHHHHHHHCCCHHHH
FLGDYIYEYASPADPAGLARVHALRHARTLADFRDRYALHRSDAALQAAHAAAPWAVTWD
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECC
DHEVENDYAGLSGREPEAAFADLRAAAYQAFYEHMPLRAATLQAGGGFGGLQLCRRLAWG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHH
RLARLHLLDARQFRSRQACRPQGSGGAGSVLPATCAELADPARSFLGMDQERWLDAGLAE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC
DAAPAGDGSTPRWSVIAQQTLFSPRRAPSGRQGTDSWDGYPAARERLLASLAGRAPRNTV
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEE
FLGGDIHQNYVCEVRGPAPDGPVLASEFCGTSISSRAGTTQDRVDAVARLNPHVLLARGD
EECCCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECC
LRGWGLADVTPQRWTTVLRTVDDPLRPDSACSTLARFVVEDRRPGPVRD
CCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SWRPDPARHAPDRRTLLRLAAALAVPGALPRWAWSSPGWGNDPFALGVASGDPAPDGFV
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEE
LWTRLMPPEPGGAAGPATVRWELAHDDRFGRIVRRGTATALPELAHSVHVELRGLEPGRW
EEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHEEEEEECCCCCCE
YFYRFLHGDAASPTGRTRTAPSLADPRPHLRLGFASCQRWEHGHYAAWNDVCRHAPDLVL
EEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHCCCCCCHHHHHHHHCCCHHHH
FLGDYIYEYASPADPAGLARVHALRHARTLADFRDRYALHRSDAALQAAHAAAPWAVTWD
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECC
DHEVENDYAGLSGREPEAAFADLRAAAYQAFYEHMPLRAATLQAGGGFGGLQLCRRLAWG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHH
RLARLHLLDARQFRSRQACRPQGSGGAGSVLPATCAELADPARSFLGMDQERWLDAGLAE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC
DAAPAGDGSTPRWSVIAQQTLFSPRRAPSGRQGTDSWDGYPAARERLLASLAGRAPRNTV
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEE
FLGGDIHQNYVCEVRGPAPDGPVLASEFCGTSISSRAGTTQDRVDAVARLNPHVLLARGD
EECCCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECC
LRGWGLADVTPQRWTTVLRTVDDPLRPDSACSTLARFVVEDRRPGPVRD
CCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]