Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610053
Identifier: 120610053
GI number: 120610053
Start: 1497418
End: 1498650
Strand: Direct
Name: 120610053
Synonym: Aave_1366
Alternate gene names: NA
Gene position: 1497418-1498650 (Clockwise)
Preceding gene: 120610052
Following gene: 120610060
Centisome position: 27.97
GC content: 70.56
Gene sequence:
>1233_bases ATGTCAAACCATGGCGACGCAGACGATGTGCTGCACGTGGCCATCGTCGGAGGCGGGGCCCTGGGCCTTGCGTCCGCATA CCACCTCATGCAGCGGGCGCGTCGCCTGGGCGCGTTCCTGGACGTGCATGTCTTCGATGGCCGGGAGGCCGCGCAGGGGC AGGGTTTCGCGCCCGGTGCGGGTCCGGCCGGCGGGAGGGATGACGAGGGCAGCCAACTCGCCGTGCCGCTGGTCCGCACC GTGCACCGCGCCGCCATGGCCCTGCGCGGCCGTATCCGGCTCGACTATACCTGCGGGCGCTTCTTCGACGATTGTCTCCG GGATCCGGAGGCGATACTCGGCGATGCGGCGCGTACCCTGTCGCTGTCCATCGACTGGCGCGATCCGGGCGTGCTGGACG CCCTGGTCCAGGTGCGCGACGGCTACTACTACCCGCTCATCTCGACCATGTTCCTCTGCGACCCCTCCGGGCCGCAGAAC ACCCCGGTTCAGGCGGCGCTGGAATACATCCGCTGGAAGGACGACGGCCGCTCCCTGGCGGGCAGCGATTTCTCCGACGA TGCTTCGCGCAAATGGGCGGAATCGCTGGCGGCCCACCTGGAGGAGCGGTCGGACGAGCAGGTGTCCGTCACCATCCGCT CGGGAGGCCGGTTGCTGGTGCGCGTGATGAGCGACATGGTGGAGGTCCTGTGCGATGGCCAGTCCCGGATCTTCGACATC TGCGTCATGGCCAGCTCGCCGGGCGATGCCTTGCGCGTGCTGGCCTTCGACACCGCCACGGCCGCCTTCGGCGTGCAGGT CGGCCGCATCCTGGACAGCGTCTGCGAGACGGACGACGAATCCGCGCGGTATGGCGAAGAGGGCGTGCCGCCGTCACGCC TCCCGGGAGCGTCCCCGGGGTCCGGCGCCGGATGGCGGCCGGATGCGTGGGACGGCAATGCGCCGGGCAACCCGTCGGCG CAGCCGCAGTCCCCGTCCACCCGCCCCGCGCCGGAAGACCGGGCCTGGGCCGCTTTCCGGCGCCACGTGTTCGATGTGTC GGTGAAAGCCCGGGCCGACATCCGGGCGCTGAACGAAGCCTTCGTCGAGGGCTGGCGCGAGGGGGAAGGGCGCGTTCCCT GTGCCGAGATACCGCCGCTGCTGTTCGTGGGCGGCTGGCCCTACGGCGCCGTGCTGCAGGAGCAGTGCATGGAGCAGGCC GAGGAACTGGGCAACTGGCTGCTGCCCGAGTGA
Upstream 100 bases:
>100_bases CGTCCTCCGGATTTCCGGGGCAGAGCGAGACAATAACTTGAAGACCGGCGGCCGGTCGTGCACATTGGGCCACTGTCAAC CAGAATTCAGGCGGGAGAAC
Downstream 100 bases:
>100_bases GTCCTCCCGCGGGGCGTGCCCCGGGGAAGTTCCGTCAGAAGCGGTAGGTCGAGGTCAGCATGTAGGTGCGCCGCTGGCCG TAGAAGCAGTCGCCGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MSNHGDADDVLHVAIVGGGALGLASAYHLMQRARRLGAFLDVHVFDGREAAQGQGFAPGAGPAGGRDDEGSQLAVPLVRT VHRAAMALRGRIRLDYTCGRFFDDCLRDPEAILGDAARTLSLSIDWRDPGVLDALVQVRDGYYYPLISTMFLCDPSGPQN TPVQAALEYIRWKDDGRSLAGSDFSDDASRKWAESLAAHLEERSDEQVSVTIRSGGRLLVRVMSDMVEVLCDGQSRIFDI CVMASSPGDALRVLAFDTATAAFGVQVGRILDSVCETDDESARYGEEGVPPSRLPGASPGSGAGWRPDAWDGNAPGNPSA QPQSPSTRPAPEDRAWAAFRRHVFDVSVKARADIRALNEAFVEGWREGEGRVPCAEIPPLLFVGGWPYGAVLQEQCMEQA EELGNWLLPE
Sequences:
>Translated_410_residues MSNHGDADDVLHVAIVGGGALGLASAYHLMQRARRLGAFLDVHVFDGREAAQGQGFAPGAGPAGGRDDEGSQLAVPLVRT VHRAAMALRGRIRLDYTCGRFFDDCLRDPEAILGDAARTLSLSIDWRDPGVLDALVQVRDGYYYPLISTMFLCDPSGPQN TPVQAALEYIRWKDDGRSLAGSDFSDDASRKWAESLAAHLEERSDEQVSVTIRSGGRLLVRVMSDMVEVLCDGQSRIFDI CVMASSPGDALRVLAFDTATAAFGVQVGRILDSVCETDDESARYGEEGVPPSRLPGASPGSGAGWRPDAWDGNAPGNPSA QPQSPSTRPAPEDRAWAAFRRHVFDVSVKARADIRALNEAFVEGWREGEGRVPCAEIPPLLFVGGWPYGAVLQEQCMEQA EELGNWLLPE >Mature_409_residues SNHGDADDVLHVAIVGGGALGLASAYHLMQRARRLGAFLDVHVFDGREAAQGQGFAPGAGPAGGRDDEGSQLAVPLVRTV HRAAMALRGRIRLDYTCGRFFDDCLRDPEAILGDAARTLSLSIDWRDPGVLDALVQVRDGYYYPLISTMFLCDPSGPQNT PVQAALEYIRWKDDGRSLAGSDFSDDASRKWAESLAAHLEERSDEQVSVTIRSGGRLLVRVMSDMVEVLCDGQSRIFDIC VMASSPGDALRVLAFDTATAAFGVQVGRILDSVCETDDESARYGEEGVPPSRLPGASPGSGAGWRPDAWDGNAPGNPSAQ PQSPSTRPAPEDRAWAAFRRHVFDVSVKARADIRALNEAFVEGWREGEGRVPCAEIPPLLFVGGWPYGAVLQEQCMEQAE ELGNWLLPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44237; Mature: 44106
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNHGDADDVLHVAIVGGGALGLASAYHLMQRARRLGAFLDVHVFDGREAAQGQGFAPGA CCCCCCCHHEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHCCCCCCCCCC GPAGGRDDEGSQLAVPLVRTVHRAAMALRGRIRLDYTCGRFFDDCLRDPEAILGDAARTL CCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCHHHHHCCCCEEE SLSIDWRDPGVLDALVQVRDGYYYPLISTMFLCDPSGPQNTPVQAALEYIRWKDDGRSLA EEEEECCCCHHHHHHHHHHCCEEHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCCC GSDFSDDASRKWAESLAAHLEERSDEQVSVTIRSGGRLLVRVMSDMVEVLCDGQSRIFDI CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEE CVMASSPGDALRVLAFDTATAAFGVQVGRILDSVCETDDESARYGEEGVPPSRLPGASPG EEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCC SGAGWRPDAWDGNAPGNPSAQPQSPSTRPAPEDRAWAAFRRHVFDVSVKARADIRALNEA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHH FVEGWREGEGRVPCAEIPPLLFVGGWPYGAVLQEQCMEQAEELGNWLLPE HHHHHHCCCCCCCHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SNHGDADDVLHVAIVGGGALGLASAYHLMQRARRLGAFLDVHVFDGREAAQGQGFAPGA CCCCCCHHEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHCCCCCCCCCC GPAGGRDDEGSQLAVPLVRTVHRAAMALRGRIRLDYTCGRFFDDCLRDPEAILGDAARTL CCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCHHHHHCCCCEEE SLSIDWRDPGVLDALVQVRDGYYYPLISTMFLCDPSGPQNTPVQAALEYIRWKDDGRSLA EEEEECCCCHHHHHHHHHHCCEEHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCCC GSDFSDDASRKWAESLAAHLEERSDEQVSVTIRSGGRLLVRVMSDMVEVLCDGQSRIFDI CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEE CVMASSPGDALRVLAFDTATAAFGVQVGRILDSVCETDDESARYGEEGVPPSRLPGASPG EEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCC SGAGWRPDAWDGNAPGNPSAQPQSPSTRPAPEDRAWAAFRRHVFDVSVKARADIRALNEA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHH FVEGWREGEGRVPCAEIPPLLFVGGWPYGAVLQEQCMEQAEELGNWLLPE HHHHHHCCCCCCCHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA