Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is cusC [H]
Identifier: 120610051
GI number: 120610051
Start: 1494072
End: 1495574
Strand: Direct
Name: cusC [H]
Synonym: Aave_1364
Alternate gene names: 120610051
Gene position: 1494072-1495574 (Clockwise)
Preceding gene: 120610050
Following gene: 120610052
Centisome position: 27.91
GC content: 75.58
Gene sequence:
>1503_bases ATGACGATGTTTCCCCACTGGTATTCCCTTTCCCGGCTGGCGCCGCTGGCCGCGGCCCTGGCGCTGGCCGGATGCATGAG CGCTCCGGCGGTGCCGGAGCATGCCGGCGTGGCCGTGCCGGCCACGTTCAGCGAAGCGGCCGGCGCCCCCTCGTGGACCA CGGCGCCGCCCGCCGAGGCGCAGCCCCGCGGCACGTGGTGGCTGGGCTTCCGCGACCCGGTGCTGGACGATCTGGTGCAG CGCGCCGGCAGCGGCAACACCAGCGTGCAGGAGGCCGCCGCCCGGCTGGCCGAAGCGCGGGCGCTGCTGCGCTCCGCCGA TGCCAGCCGCGCGCCGCAACTGGGTGCCTCCGCCGGCGTGGCGCGGCAGGCCGGCGCCAACACGGCCACGGGCGGTCCGG TGCCGGCCACGCTGGCCACGGCGGGGCTGAACGTGTCCTATGAGCTGGACCTGTTCGGCCGCCTGTCGCAGGCCAGCGAG GCCGCGCGGCTCGATGCCCGCTCGCGCGAGGCACTGCTCCAGAGCACACGCCTGATGGCGCAGGCCGACACCGCCCAGGC CTACCTGCAACTGCGCTCGGTGCAGGCCGAGCAGGCCCTGGTGCAGGAGGGGCTGGCCGCCTACCGCGACACCCTGCGCC TGACCGAGCGCCGCTACCGGGCCGGCGACGTGGCCGAGCTGGATGTGGCGCGCGTGCAGGCCGAGGTGGCCGCCACCGAA TCCGATGCCCTCGCGCTGGAGCGCCAGCAGGCCGTGCTGACCCATGCGCTGGCCCTGCTGGTCGGCGAGGTGGCCACCGG CTTCACCGTGCCCCCCGCGGCCGGCGAAGCGGCGCTGCCCGTCATTCCCGCCGGCGTGCCGGGCACGGTGCTGGCGCGCC GTCCGGACGTCTCGGCGGCGCAGGCGGCCGTGCTGGCGGCGCAGGCCCGCGTGGGCGTGGCCCAGGCCGCGTGGTTCCCG GCCGTCACGCTCACGGGCAACGGCGGCTATGCCTCGCCGGAACTGGGCGACCTGTTCAAGTGGTCGGCCCGCTCCTGGGG CATCGGTGCGCTGCTGTCGCTGCCGCTCTTCGACGGCGGCCAGCGCCAGGCGCAGGAAGACGGCGCCCGCGCCCGGCTGG AGGGCGCGCTGGCAGCCCACCGCGGCCAGGTGCTCACCGCCTTCCGCGAGGTCGAGGACCAGCTCAGCGCGCTGCGCCTG CTGGCAGGGCAGGCCGAGGCCCAGGGCCGTGCCGTGCAGTCCGCGGCCCGTGCCACGCAACTGTCGGATTCGCGCTACCG CAACGGCATGGTGAGCCAGCTGGAGCTGCTCGACGCCCGCCGCAGCGAGTTGCGCAACCGTCGGCAGGCCCTGCAGGTGC GCACCGCGCAGTACACGGCCACCGTCGGGCTGATCCGCGCGCTGGGCGGCGGCTGGGGCGACAGCGGCACGACTGCGCGG GAAACGGACCGCCCGGTGGCCGGAAATGGTGAAAAATCCCGCAACTTGGGTAAATCGGGGTAG
Upstream 100 bases:
>100_bases CGATCACCGACGCCGAGCGGGGCGCGCCGGGCCATGGGGCCTCGGCCCAGCCTGTGATCGCCGCACCGCGCGGCCGGCAC GAATGAGACGGAGCTTTGCC
Downstream 100 bases:
>100_bases CAAAGCGCCGCCGCCGGGGCGCCGCGGCGCCATCCGGCCTATAGTGCTCCTGTTTGGAGCCGGACCGTGCCATAGGTCCC GGCTAGGATATGGGGTCGCC
Product: RND efflux system outer membrane lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MTMFPHWYSLSRLAPLAAALALAGCMSAPAVPEHAGVAVPATFSEAAGAPSWTTAPPAEAQPRGTWWLGFRDPVLDDLVQ RAGSGNTSVQEAAARLAEARALLRSADASRAPQLGASAGVARQAGANTATGGPVPATLATAGLNVSYELDLFGRLSQASE AARLDARSREALLQSTRLMAQADTAQAYLQLRSVQAEQALVQEGLAAYRDTLRLTERRYRAGDVAELDVARVQAEVAATE SDALALERQQAVLTHALALLVGEVATGFTVPPAAGEAALPVIPAGVPGTVLARRPDVSAAQAAVLAAQARVGVAQAAWFP AVTLTGNGGYASPELGDLFKWSARSWGIGALLSLPLFDGGQRQAQEDGARARLEGALAAHRGQVLTAFREVEDQLSALRL LAGQAEAQGRAVQSAARATQLSDSRYRNGMVSQLELLDARRSELRNRRQALQVRTAQYTATVGLIRALGGGWGDSGTTAR ETDRPVAGNGEKSRNLGKSG
Sequences:
>Translated_500_residues MTMFPHWYSLSRLAPLAAALALAGCMSAPAVPEHAGVAVPATFSEAAGAPSWTTAPPAEAQPRGTWWLGFRDPVLDDLVQ RAGSGNTSVQEAAARLAEARALLRSADASRAPQLGASAGVARQAGANTATGGPVPATLATAGLNVSYELDLFGRLSQASE AARLDARSREALLQSTRLMAQADTAQAYLQLRSVQAEQALVQEGLAAYRDTLRLTERRYRAGDVAELDVARVQAEVAATE SDALALERQQAVLTHALALLVGEVATGFTVPPAAGEAALPVIPAGVPGTVLARRPDVSAAQAAVLAAQARVGVAQAAWFP AVTLTGNGGYASPELGDLFKWSARSWGIGALLSLPLFDGGQRQAQEDGARARLEGALAAHRGQVLTAFREVEDQLSALRL LAGQAEAQGRAVQSAARATQLSDSRYRNGMVSQLELLDARRSELRNRRQALQVRTAQYTATVGLIRALGGGWGDSGTTAR ETDRPVAGNGEKSRNLGKSG >Mature_499_residues TMFPHWYSLSRLAPLAAALALAGCMSAPAVPEHAGVAVPATFSEAAGAPSWTTAPPAEAQPRGTWWLGFRDPVLDDLVQR AGSGNTSVQEAAARLAEARALLRSADASRAPQLGASAGVARQAGANTATGGPVPATLATAGLNVSYELDLFGRLSQASEA ARLDARSREALLQSTRLMAQADTAQAYLQLRSVQAEQALVQEGLAAYRDTLRLTERRYRAGDVAELDVARVQAEVAATES DALALERQQAVLTHALALLVGEVATGFTVPPAAGEAALPVIPAGVPGTVLARRPDVSAAQAAVLAAQARVGVAQAAWFPA VTLTGNGGYASPELGDLFKWSARSWGIGALLSLPLFDGGQRQAQEDGARARLEGALAAHRGQVLTAFREVEDQLSALRLL AGQAEAQGRAVQSAARATQLSDSRYRNGMVSQLELLDARRSELRNRRQALQVRTAQYTATVGLIRALGGGWGDSGTTARE TDRPVAGNGEKSRNLGKSG
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI1786785, Length=464, Percent_Identity=30.3879310344828, Blast_Score=194, Evalue=1e-50, Organism=Escherichia coli, GI2367348, Length=427, Percent_Identity=26.9320843091335, Blast_Score=120, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 - InterPro: IPR010131 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 52126; Mature: 51995
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMFPHWYSLSRLAPLAAALALAGCMSAPAVPEHAGVAVPATFSEAAGAPSWTTAPPAEA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHCCCCCCCCCCCCCC QPRGTWWLGFRDPVLDDLVQRAGSGNTSVQEAAARLAEARALLRSADASRAPQLGASAGV CCCCCEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH ARQAGANTATGGPVPATLATAGLNVSYELDLFGRLSQASEAARLDARSREALLQSTRLMA HHHCCCCCCCCCCCCHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QADTAQAYLQLRSVQAEQALVQEGLAAYRDTLRLTERRYRAGDVAELDVARVQAEVAATE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC SDALALERQQAVLTHALALLVGEVATGFTVPPAAGEAALPVIPAGVPGTVLARRPDVSAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCEEECCCCCHHH QAAVLAAQARVGVAQAAWFPAVTLTGNGGYASPELGDLFKWSARSWGIGALLSLPLFDGG HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCCC QRQAQEDGARARLEGALAAHRGQVLTAFREVEDQLSALRLLAGQAEAQGRAVQSAARATQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LSDSRYRNGMVSQLELLDARRSELRNRRQALQVRTAQYTATVGLIRALGGGWGDSGTTAR HCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ETDRPVAGNGEKSRNLGKSG CCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure TMFPHWYSLSRLAPLAAALALAGCMSAPAVPEHAGVAVPATFSEAAGAPSWTTAPPAEA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHCCCCCCCCCCCCCC QPRGTWWLGFRDPVLDDLVQRAGSGNTSVQEAAARLAEARALLRSADASRAPQLGASAGV CCCCCEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH ARQAGANTATGGPVPATLATAGLNVSYELDLFGRLSQASEAARLDARSREALLQSTRLMA HHHCCCCCCCCCCCCHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QADTAQAYLQLRSVQAEQALVQEGLAAYRDTLRLTERRYRAGDVAELDVARVQAEVAATE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC SDALALERQQAVLTHALALLVGEVATGFTVPPAAGEAALPVIPAGVPGTVLARRPDVSAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCEEECCCCCHHH QAAVLAAQARVGVAQAAWFPAVTLTGNGGYASPELGDLFKWSARSWGIGALLSLPLFDGG HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCCC QRQAQEDGARARLEGALAAHRGQVLTAFREVEDQLSALRLLAGQAEAQGRAVQSAARATQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LSDSRYRNGMVSQLELLDARRSELRNRRQALQVRTAQYTATVGLIRALGGGWGDSGTTAR HCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ETDRPVAGNGEKSRNLGKSG CCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]