Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609977
Identifier: 120609977
GI number: 120609977
Start: 1416510
End: 1417220
Strand: Reverse
Name: 120609977
Synonym: Aave_1290
Alternate gene names: NA
Gene position: 1417220-1416510 (Counterclockwise)
Preceding gene: 120609978
Following gene: 120609976
Centisome position: 26.48
GC content: 69.48
Gene sequence:
>711_bases ATGCTTCGTCATCCACTGCGCTGGCTTGCCGGCGCTGCGCTTGCGCTCACCCTTTGCACGCCGGTCGCGGCCCAGTGGGT GGTCCCGCCCGGCTCCTCGCTCGACGTGCCTCCCGGGGGCGCCGTGGATATCGCCTGCACGTCGCTGGACATGCAGGGCA CGCTGAATCTCAGCGGCGGCACGATCTCGGTGGACTCCTCCGCCACCTTCGCTTCCGGCTCCAACGTGACCGGCTCCGGC GGCACCATCTCGGTGGGCGGAGACCTCATCGCCACGGGCCCGGTGAACACGGGCAACAACACCCTCGTGCTGCGCGACGG ATGCGACCCGGGCAACACCTCCCAGATCAGCGGCAACATCGTCGTGCAGAACCTCGTGCTGCAGAGCACGACGGGCCGCA CCTTCGTCCTGCCCGCAGGCGCCAACATCACGGTGCTGGGCTCGCTCACGATCCAGGGCACCCAAGCGCAACCGGTGCAG CTCACGTCGGCCAGCGGCACGGCCGTGGTCAACCTGGGCCCGAACGCCACCGTCACCCGCGATTTCGCCAGCGTGCCGCC CACGGTGCAGATCGGGGCCGCGCCGGCGCCGACGCCGACGCCGATACCCACGCTCAACGAATACGGTCTGGCGCTGCTGA CCCTGCTGATCGGCGCGCTCATGGTCTGGAAACGCCGCGGACCGGCAATGCGCCTGCAAAGTGCAGACTGA
Upstream 100 bases:
>100_bases AGTGCCCAAGCACTGACGAGGCTGTTCCAACGATTACTACATTCGTCGCAGCCACCGGCCATCTGCGCCGGCCTGCAGGT CGCACCGGAGGAGGTTTTTC
Downstream 100 bases:
>100_bases TTGCTCCCCGGCACGGGCTGGATGTCCATCTGCGTCCGGCGCGAGCCGCCAACATATCGATAGGAAGTCAAGAGAGGGTT AAACCATGCCGAAGAAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MLRHPLRWLAGAALALTLCTPVAAQWVVPPGSSLDVPPGGAVDIACTSLDMQGTLNLSGGTISVDSSATFASGSNVTGSG GTISVGGDLIATGPVNTGNNTLVLRDGCDPGNTSQISGNIVVQNLVLQSTTGRTFVLPAGANITVLGSLTIQGTQAQPVQ LTSASGTAVVNLGPNATVTRDFASVPPTVQIGAAPAPTPTPIPTLNEYGLALLTLLIGALMVWKRRGPAMRLQSAD
Sequences:
>Translated_236_residues MLRHPLRWLAGAALALTLCTPVAAQWVVPPGSSLDVPPGGAVDIACTSLDMQGTLNLSGGTISVDSSATFASGSNVTGSG GTISVGGDLIATGPVNTGNNTLVLRDGCDPGNTSQISGNIVVQNLVLQSTTGRTFVLPAGANITVLGSLTIQGTQAQPVQ LTSASGTAVVNLGPNATVTRDFASVPPTVQIGAAPAPTPTPIPTLNEYGLALLTLLIGALMVWKRRGPAMRLQSAD >Mature_236_residues MLRHPLRWLAGAALALTLCTPVAAQWVVPPGSSLDVPPGGAVDIACTSLDMQGTLNLSGGTISVDSSATFASGSNVTGSG GTISVGGDLIATGPVNTGNNTLVLRDGCDPGNTSQISGNIVVQNLVLQSTTGRTFVLPAGANITVLGSLTIQGTQAQPVQ LTSASGTAVVNLGPNATVTRDFASVPPTVQIGAAPAPTPTPIPTLNEYGLALLTLLIGALMVWKRRGPAMRLQSAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23672; Mature: 23672
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRHPLRWLAGAALALTLCTPVAAQWVVPPGSSLDVPPGGAVDIACTSLDMQGTLNLSGG CCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEEECCCEEEEECCC TISVDSSATFASGSNVTGSGGTISVGGDLIATGPVNTGNNTLVLRDGCDPGNTSQISGNI EEEECCCCEECCCCCCCCCCCEEEECCCEEEECCCCCCCCEEEEECCCCCCCCCEECCCE VVQNLVLQSTTGRTFVLPAGANITVLGSLTIQGTQAQPVQLTSASGTAVVNLGPNATVTR EEEEEEEEECCCCEEEEECCCCEEEEEEEEEECCCCCCEEEECCCCEEEEEECCCCEEEE DFASVPPTVQIGAAPAPTPTPIPTLNEYGLALLTLLIGALMVWKRRGPAMRLQSAD HHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCC >Mature Secondary Structure MLRHPLRWLAGAALALTLCTPVAAQWVVPPGSSLDVPPGGAVDIACTSLDMQGTLNLSGG CCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEEECCCEEEEECCC TISVDSSATFASGSNVTGSGGTISVGGDLIATGPVNTGNNTLVLRDGCDPGNTSQISGNI EEEECCCCEECCCCCCCCCCCEEEECCCEEEECCCCCCCCEEEEECCCCCCCCCEECCCE VVQNLVLQSTTGRTFVLPAGANITVLGSLTIQGTQAQPVQLTSASGTAVVNLGPNATVTR EEEEEEEEECCCCEEEEECCCCEEEEEEEEEECCCCCCEEEECCCCEEEEEECCCCEEEE DFASVPPTVQIGAAPAPTPTPIPTLNEYGLALLTLLIGALMVWKRRGPAMRLQSAD HHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA