Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609940
Identifier: 120609940
GI number: 120609940
Start: 1376153
End: 1377319
Strand: Direct
Name: 120609940
Synonym: Aave_1253
Alternate gene names: NA
Gene position: 1376153-1377319 (Clockwise)
Preceding gene: 120609939
Following gene: 120609942
Centisome position: 25.71
GC content: 75.41
Gene sequence:
>1167_bases ATGATCCACTGGAACCACGGCGGCCAGGACCGCAGCGCGCAATGGCACTCGGAAGCCGGCGTCGCCGCGCCGCGCCGCGT GGTGGTGGCCGACGACACGCTGCCGGCCGACGCGGCCTACCGCATGGCCTGCGAAGGCACGGCGCTGCTGTGGCAGGGGG ATTTCCAGAATGCCCGGCACCTGCTTCAGGCGCTGATGCGCCGGGCCGACGGCCGGGGCCGGCCGCGCGGCGGCGCGAAG GGCCGCGGCAAGGCGGCGGCCGCGCCGGCCACCGCACCGTCGCAGGCCTTCCACCTGCACCGCCAGGCCCAGGCCCAGCG GGCGCGGGTGCTCGGCATGCTGCTCATTCCCGTGGAAGGCGACCATGGCATCGCGTTGCGGCGTGCACCCGACTGGCGGC CGGCGCTGGCCGAGGCCTGGGGCGCTCCCGACGGTACGCCCCGCGTGGCCTCGCTGCGCGAGCTGCTGGGTCTCGTGGGC GCGCACGAGTGGCGCAAGAAGGGCGTGGAGATTCCCGCCCTGGGGGCGCCGCCGGACAACCGCATTCATCCGCACTACGG GGTGTTCTCGCCCGTGCGCGGTGAATACATCGATCTCGTGGCGCAGGTGCCGCTGCCCGCGGGCGCGGCTGCGCTGGCCT TCGATATCGGCACCGGCACCGGCGTGCTCGCGGCCGTGCTCGCGCGGCGCGGCGTGCGCCGTGTCGTCGCCACCGACCAG GACCCCCGGGCCCTGGCCTGCGCGCGCGAGAACCTGCAGCGCCTGCGCGTGCTGCCGGCCGTGGACATCCTCCAGGCCGA TCTCTTTCCCCCGGGCCGCGCGCCCCTGGTGGTGTGCAATCCACCGTGGGTGCCGGCGCGTGCCGCCGCTCCCGTCGAGC GTGCGGTCTATGACGAGGACAGCGGCATGCTGCGGGGCTTCCTCGGCGGCCTGGCGGAGCACCTGGAGCCGGGCGGGGAG GGCTGGCTGATTCTCTCGGACCTGGCGGAGCACCTGGATCTGCGCACGCGCGTCCAACTGCTCGGCTGGATCGAGGCCGC GGGCCTGCGGGTGCTGGGCCGGCACGACGTCCGGCCGCGCCACGGGAAGGCGGCGGATGCCTCCGATCCGCTGCACGCGG CGCGAGCGGCGGAAACCACCTCGCTCTGGCGGCTGGGCGTCGCCTGA
Upstream 100 bases:
>100_bases GAGATGTCCACCGCCAAGACCGCCGTCATCGGCGGGGTGAAGATCGAGGAAGTGCGCCTGCAGCGCCCCCTCAACTGATC CGCCAGAGTCTTTGCCCGGC
Downstream 100 bases:
>100_bases GGCCGCGGGCCGCAAGCCCCTCCGGCGCGCCGTGTCAGGCCGGCGTGGGCAGCAACTGCTCCATGCGCCGGCGCACGGTG GCGGCCCGTTCCGGTCCGGC
Product: methyltransferase small
Products: NA
Alternate protein names: Methyltransferase; Methylase Of Polypeptide Chain Release Factors; Methyltransferase Domain Protein; ElmF Protein; Methyltransferase SmallRibosomal; RNA Methyltransferase; Adenine Specific DNA-Methyltransferase; Methylase Of Polypeptide Chain Release Factors Protein; Methyltransferase Small Domain-Containing Protein; 50S Ribosomal Methyltransferase PrmA Family Protein; Methylase
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MIHWNHGGQDRSAQWHSEAGVAAPRRVVVADDTLPADAAYRMACEGTALLWQGDFQNARHLLQALMRRADGRGRPRGGAK GRGKAAAAPATAPSQAFHLHRQAQAQRARVLGMLLIPVEGDHGIALRRAPDWRPALAEAWGAPDGTPRVASLRELLGLVG AHEWRKKGVEIPALGAPPDNRIHPHYGVFSPVRGEYIDLVAQVPLPAGAAALAFDIGTGTGVLAAVLARRGVRRVVATDQ DPRALACARENLQRLRVLPAVDILQADLFPPGRAPLVVCNPPWVPARAAAPVERAVYDEDSGMLRGFLGGLAEHLEPGGE GWLILSDLAEHLDLRTRVQLLGWIEAAGLRVLGRHDVRPRHGKAADASDPLHAARAAETTSLWRLGVA
Sequences:
>Translated_388_residues MIHWNHGGQDRSAQWHSEAGVAAPRRVVVADDTLPADAAYRMACEGTALLWQGDFQNARHLLQALMRRADGRGRPRGGAK GRGKAAAAPATAPSQAFHLHRQAQAQRARVLGMLLIPVEGDHGIALRRAPDWRPALAEAWGAPDGTPRVASLRELLGLVG AHEWRKKGVEIPALGAPPDNRIHPHYGVFSPVRGEYIDLVAQVPLPAGAAALAFDIGTGTGVLAAVLARRGVRRVVATDQ DPRALACARENLQRLRVLPAVDILQADLFPPGRAPLVVCNPPWVPARAAAPVERAVYDEDSGMLRGFLGGLAEHLEPGGE GWLILSDLAEHLDLRTRVQLLGWIEAAGLRVLGRHDVRPRHGKAADASDPLHAARAAETTSLWRLGVA >Mature_388_residues MIHWNHGGQDRSAQWHSEAGVAAPRRVVVADDTLPADAAYRMACEGTALLWQGDFQNARHLLQALMRRADGRGRPRGGAK GRGKAAAAPATAPSQAFHLHRQAQAQRARVLGMLLIPVEGDHGIALRRAPDWRPALAEAWGAPDGTPRVASLRELLGLVG AHEWRKKGVEIPALGAPPDNRIHPHYGVFSPVRGEYIDLVAQVPLPAGAAALAFDIGTGTGVLAAVLARRGVRRVVATDQ DPRALACARENLQRLRVLPAVDILQADLFPPGRAPLVVCNPPWVPARAAAPVERAVYDEDSGMLRGFLGGLAEHLEPGGE GWLILSDLAEHLDLRTRVQLLGWIEAAGLRVLGRHDVRPRHGKAADASDPLHAARAAETTSLWRLGVA
Specific function: Unknown
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41600; Mature: 41600
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHWNHGGQDRSAQWHSEAGVAAPRRVVVADDTLPADAAYRMACEGTALLWQGDFQNARH CCCCCCCCCCCCCCHHCCCCCCCCCEEEEECCCCCCCHHHHEECCCCEEEEECCHHHHHH LLQALMRRADGRGRPRGGAKGRGKAAAAPATAPSQAFHLHRQAQAQRARVLGMLLIPVEG HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEECC DHGIALRRAPDWRPALAEAWGAPDGTPRVASLRELLGLVGAHEWRKKGVEIPALGAPPDN CCCEEEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCC RIHPHYGVFSPVRGEYIDLVAQVPLPAGAAALAFDIGTGTGVLAAVLARRGVRRVVATDQ CCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC DPRALACARENLQRLRVLPAVDILQADLFPPGRAPLVVCNPPWVPARAAAPVERAVYDED CCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHCCC SGMLRGFLGGLAEHLEPGGEGWLILSDLAEHLDLRTRVQLLGWIEAAGLRVLGRHDVRPR CHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCC HGKAADASDPLHAARAAETTSLWRLGVA CCCCCCCCCCHHHHHHHHHHHHEEECCC >Mature Secondary Structure MIHWNHGGQDRSAQWHSEAGVAAPRRVVVADDTLPADAAYRMACEGTALLWQGDFQNARH CCCCCCCCCCCCCCHHCCCCCCCCCEEEEECCCCCCCHHHHEECCCCEEEEECCHHHHHH LLQALMRRADGRGRPRGGAKGRGKAAAAPATAPSQAFHLHRQAQAQRARVLGMLLIPVEG HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEECC DHGIALRRAPDWRPALAEAWGAPDGTPRVASLRELLGLVGAHEWRKKGVEIPALGAPPDN CCCEEEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCC RIHPHYGVFSPVRGEYIDLVAQVPLPAGAAALAFDIGTGTGVLAAVLARRGVRRVVATDQ CCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC DPRALACARENLQRLRVLPAVDILQADLFPPGRAPLVVCNPPWVPARAAAPVERAVYDED CCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHCCC SGMLRGFLGGLAEHLEPGGEGWLILSDLAEHLDLRTRVQLLGWIEAAGLRVLGRHDVRPR CHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCC HGKAADASDPLHAARAAETTSLWRLGVA CCCCCCCCCCHHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA