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The map label for this gene is yaaA [C]

Identifier: 120609860

GI number: 120609860

Start: 1292631

End: 1293410

Strand: Reverse

Name: yaaA [C]

Synonym: Aave_1172

Alternate gene names: 120609860

Gene position: 1293410-1292631 (Counterclockwise)

Preceding gene: 120609861

Following gene: 120609859

Centisome position: 24.16

GC content: 67.82

Gene sequence:

>780_bases
ATGCTGTTCCTGCTGTCTCCCGCCAAATCCCTGGACTACGACACCCCGCTGCCGCCAGGGCTGGCCCACACCCTTCCCCC
GTTCATCCATGAATCCACGCAGCTCATCGAGGTGCTGCGTGAGAAGTCTCCGCAGGAGCTGGCGTCCCTGATGGGCATCA
GCGATGCGCTGGCCGGGCTCAATGCCGCGCGCTATGCCGCCTGGTCGCCGCGGTTCACGGCGGCGAACGCCCGGCAGGCG
CTCTTCGCTTTCAACGGCGATGTCTATGAGGGCCTGGACGCCCGGAGCCTGGACGGCGACGGATTGCGCTGGGCGCAGGA
CCATGTCGCCATCCTGAGCGGCCTCTACGGCGTGCTGCGCCCCCTCGACCGGATGCAGCCCTACCGCCTGGAGATGGGCA
CGCGGCTGGCCACCGGCGCAGGCGCCAATCTCTACCGGTTCTGGGGCAAGCGCATCGCCGAGCACCTGAACCAGCGCCTC
GCGGCCGACGCCACGCCGGTGGTGGTGAACCTCGCTTCCCAGGAATACTTCAAATCCGTGGACACCGCCGCGCTGAAGGC
CCGCGTGATCGAATGCGTGTTCGAGGACTGGAAGGGGGGCCGCTACAAGATCATCAGCTTCCATGCCAAGCGCGCCCGCG
GGCTGATGGCGCGCTATGCCATCCAGCACCGCGTGGTGGCCCCCCGCCAGCTGGAAGGTTTCGATCTCGAAGGCTATGCG
TTCGACGCATCCGCCTCGGCGCAGGACCGCCTCGTCTTCCGCCGCAAGGACGCCGGCTGA

Upstream 100 bases:

>100_bases
CGCCTGACGGATCCCGACGGCCGGCGGCGCCACTTGCCTGGCGCCGCCGGCCGTCCGCATTTCCCCGCACCGTCCGTTCG
CACCGAGGGAATCCGCACCG

Downstream 100 bases:

>100_bases
AGCGCCCGAAAAACCGCACACCGCGGCCGTGTTTTGCACGGGGGTTAACGTACCCGATTGCCGATGGCCGCCCGACCCAC
TTTCCCGACCGAACACATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MLFLLSPAKSLDYDTPLPPGLAHTLPPFIHESTQLIEVLREKSPQELASLMGISDALAGLNAARYAAWSPRFTAANARQA
LFAFNGDVYEGLDARSLDGDGLRWAQDHVAILSGLYGVLRPLDRMQPYRLEMGTRLATGAGANLYRFWGKRIAEHLNQRL
AADATPVVVNLASQEYFKSVDTAALKARVIECVFEDWKGGRYKIISFHAKRARGLMARYAIQHRVVAPRQLEGFDLEGYA
FDASASAQDRLVFRRKDAG

Sequences:

>Translated_259_residues
MLFLLSPAKSLDYDTPLPPGLAHTLPPFIHESTQLIEVLREKSPQELASLMGISDALAGLNAARYAAWSPRFTAANARQA
LFAFNGDVYEGLDARSLDGDGLRWAQDHVAILSGLYGVLRPLDRMQPYRLEMGTRLATGAGANLYRFWGKRIAEHLNQRL
AADATPVVVNLASQEYFKSVDTAALKARVIECVFEDWKGGRYKIISFHAKRARGLMARYAIQHRVVAPRQLEGFDLEGYA
FDASASAQDRLVFRRKDAG
>Mature_259_residues
MLFLLSPAKSLDYDTPLPPGLAHTLPPFIHESTQLIEVLREKSPQELASLMGISDALAGLNAARYAAWSPRFTAANARQA
LFAFNGDVYEGLDARSLDGDGLRWAQDHVAILSGLYGVLRPLDRMQPYRLEMGTRLATGAGANLYRFWGKRIAEHLNQRL
AADATPVVVNLASQEYFKSVDTAALKARVIECVFEDWKGGRYKIISFHAKRARGLMARYAIQHRVVAPRQLEGFDLEGYA
FDASASAQDRLVFRRKDAG

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family

Homologues:

Organism=Escherichia coli, GI1786187, Length=255, Percent_Identity=55.2941176470588, Blast_Score=288, Evalue=2e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1172_ACIAC (A1TLC6)

Other databases:

- EMBL:   CP000512
- RefSeq:   YP_969538.1
- STRING:   A1TLC6
- GeneID:   4668261
- GenomeReviews:   CP000512_GR
- KEGG:   aav:Aave_1172
- NMPDR:   fig|397945.5.peg.1023
- eggNOG:   COG3022
- HOGENOM:   HBG672409
- OMA:   ISFYAKR
- PhylomeDB:   A1TLC6
- ProtClustDB:   PRK02101
- BioCyc:   AAVE397945:AAVE_1172-MONOMER
- HAMAP:   MF_00652
- InterPro:   IPR005583

Pfam domain/function: PF03883 DUF328

EC number: NA

Molecular weight: Translated: 28752; Mature: 28752

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFLLSPAKSLDYDTPLPPGLAHTLPPFIHESTQLIEVLREKSPQELASLMGISDALAGL
CEEEECCCCCCCCCCCCCCCHHHHCCHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
NAARYAAWSPRFTAANARQALFAFNGDVYEGLDARSLDGDGLRWAQDHVAILSGLYGVLR
CHHHHCCCCCCCCCCCHHHHHEEECCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
PLDRMQPYRLEMGTRLATGAGANLYRFWGKRIAEHLNQRLAADATPVVVNLASQEYFKSV
HHHHCCCHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHH
DTAALKARVIECVFEDWKGGRYKIISFHAKRARGLMARYAIQHRVVAPRQLEGFDLEGYA
HHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
FDASASAQDRLVFRRKDAG
ECCCCCCHHHHEEEECCCC
>Mature Secondary Structure
MLFLLSPAKSLDYDTPLPPGLAHTLPPFIHESTQLIEVLREKSPQELASLMGISDALAGL
CEEEECCCCCCCCCCCCCCCHHHHCCHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
NAARYAAWSPRFTAANARQALFAFNGDVYEGLDARSLDGDGLRWAQDHVAILSGLYGVLR
CHHHHCCCCCCCCCCCHHHHHEEECCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
PLDRMQPYRLEMGTRLATGAGANLYRFWGKRIAEHLNQRLAADATPVVVNLASQEYFKSV
HHHHCCCHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHH
DTAALKARVIECVFEDWKGGRYKIISFHAKRARGLMARYAIQHRVVAPRQLEGFDLEGYA
HHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
FDASASAQDRLVFRRKDAG
ECCCCCCHHHHEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA