Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120609798
Identifier: 120609798
GI number: 120609798
Start: 1212545
End: 1213501
Strand: Direct
Name: 120609798
Synonym: Aave_1107
Alternate gene names: NA
Gene position: 1212545-1213501 (Clockwise)
Preceding gene: 120609794
Following gene: 120609799
Centisome position: 22.65
GC content: 55.49
Gene sequence:
>957_bases TTGCTGTTCATCTCTATCATTCGCGCCTGTTGGTTGAATAGTCATTCGAACGGGAGGGTGGACATGAATGGCATAGTGAA GGTGCCCCAAGAGGCGCTACGCGCTGCATTGGCGCGAAAACTTGCACCGAAGCACGCGACGCGGCTTTTTCAGTTGCGTG ATATTCCGGGTGTGATGCGTTCGCGACTGGGCTGGCCGGTGGCCAGTGCGTTGATGGAGCGGTGGTTCAATGGAGCGCCG TTCCGGATGCCCCGAGAAATGAAGTTCAGCGAGCCGCCGTACCGGTTGAGCCAACTGCCTTCGGCCTATCTTGATGACAC CACCGTCACCATGCAGTGGGCGCTCGGTTTCGCCCGGGTGCAGTCCGCTATGGCCCGATTGCAGGCGAATTGGGCCAGTC CGGCCGCAATCACATTGTTGAAGCAACGTGTCGTCAGGCAATCTCCTGGGAGAATTCAAGAATGCTGGCGCTTCGGGGAT CTATCGAAGCCGGCTCGAATCCTGGATGAAACCTGTCAGGTGAACTACGCTGTCTTTGGTCGTTGGAGCGATCCGTTGGA CGACTTTTATGGCGCGATGGGCGAAGCGCAGATCAAGCTGGCTGTTTCTGGCATGGTCATCGCGCGAGGCCCCGTCCATG CCAGAATTGAAATAGACGAGTTGGGATTTTATTTGAGAGATTCCTACGACTTCAACGACGGCAATTCTTTTATTTCGCAG CCGCTGGGATGCTGGGGATTTGATGGGATGCAGTGCGGTGTCCGGACAAACCTGGATGTGCCTATTTCAGAGACCGTGGT GGATGAGGAGCCTTCGGTCGTGCAAGGCTACAAATATATTGTGCAGAACTCGGATTTCCGTCGATGGAGCGAAAGGAATC AAAGGGGCGGCGACTTCATGGTGTTATCCAATGTGCACAGGGTGCGACTGCCATTTCCTGTGCAACTGGAGTGGTGA
Upstream 100 bases:
>100_bases ATGTGCACGGCGCCCTGCAGCGCATCAATGCGTGGCTACCCCACGATCTATCTTTGGATTGCAACTGGTAACTTTCCACT GAGCGGCCATTGCTCTACCG
Downstream 100 bases:
>100_bases ATTGATGGTTGAATTATGAATGGAAAAAGATTGGTGAAATGGGCCGTCGCTGCAGTGTTGTCTGCGATAGTGCTCGGATA TTCCGCCATCCCAAGGTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MLFISIIRACWLNSHSNGRVDMNGIVKVPQEALRAALARKLAPKHATRLFQLRDIPGVMRSRLGWPVASALMERWFNGAP FRMPREMKFSEPPYRLSQLPSAYLDDTTVTMQWALGFARVQSAMARLQANWASPAAITLLKQRVVRQSPGRIQECWRFGD LSKPARILDETCQVNYAVFGRWSDPLDDFYGAMGEAQIKLAVSGMVIARGPVHARIEIDELGFYLRDSYDFNDGNSFISQ PLGCWGFDGMQCGVRTNLDVPISETVVDEEPSVVQGYKYIVQNSDFRRWSERNQRGGDFMVLSNVHRVRLPFPVQLEW
Sequences:
>Translated_318_residues MLFISIIRACWLNSHSNGRVDMNGIVKVPQEALRAALARKLAPKHATRLFQLRDIPGVMRSRLGWPVASALMERWFNGAP FRMPREMKFSEPPYRLSQLPSAYLDDTTVTMQWALGFARVQSAMARLQANWASPAAITLLKQRVVRQSPGRIQECWRFGD LSKPARILDETCQVNYAVFGRWSDPLDDFYGAMGEAQIKLAVSGMVIARGPVHARIEIDELGFYLRDSYDFNDGNSFISQ PLGCWGFDGMQCGVRTNLDVPISETVVDEEPSVVQGYKYIVQNSDFRRWSERNQRGGDFMVLSNVHRVRLPFPVQLEW >Mature_318_residues MLFISIIRACWLNSHSNGRVDMNGIVKVPQEALRAALARKLAPKHATRLFQLRDIPGVMRSRLGWPVASALMERWFNGAP FRMPREMKFSEPPYRLSQLPSAYLDDTTVTMQWALGFARVQSAMARLQANWASPAAITLLKQRVVRQSPGRIQECWRFGD LSKPARILDETCQVNYAVFGRWSDPLDDFYGAMGEAQIKLAVSGMVIARGPVHARIEIDELGFYLRDSYDFNDGNSFISQ PLGCWGFDGMQCGVRTNLDVPISETVVDEEPSVVQGYKYIVQNSDFRRWSERNQRGGDFMVLSNVHRVRLPFPVQLEW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36221; Mature: 36221
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFISIIRACWLNSHSNGRVDMNGIVKVPQEALRAALARKLAPKHATRLFQLRDIPGVMR CHHHHHHHHHHCCCCCCCEEECCHHEECCHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHH SRLGWPVASALMERWFNGAPFRMPREMKFSEPPYRLSQLPSAYLDDTTVTMQWALGFARV HHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCEEHHHHHHHHHH QSAMARLQANWASPAAITLLKQRVVRQSPGRIQECWRFGDLSKPARILDETCQVNYAVFG HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEEE RWSDPLDDFYGAMGEAQIKLAVSGMVIARGPVHARIEIDELGFYLRDSYDFNDGNSFISQ CCCCCHHHHHCCCCCCEEEEEEEEEEEECCCCEEEEEHHHCCEEEECCCCCCCCCHHHHC PLGCWGFDGMQCGVRTNLDVPISETVVDEEPSVVQGYKYIVQNSDFRRWSERNQRGGDFM CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCEE VLSNVHRVRLPFPVQLEW EEECCEEEECCCCEEECC >Mature Secondary Structure MLFISIIRACWLNSHSNGRVDMNGIVKVPQEALRAALARKLAPKHATRLFQLRDIPGVMR CHHHHHHHHHHCCCCCCCEEECCHHEECCHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHH SRLGWPVASALMERWFNGAPFRMPREMKFSEPPYRLSQLPSAYLDDTTVTMQWALGFARV HHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCEEHHHHHHHHHH QSAMARLQANWASPAAITLLKQRVVRQSPGRIQECWRFGDLSKPARILDETCQVNYAVFG HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEEE RWSDPLDDFYGAMGEAQIKLAVSGMVIARGPVHARIEIDELGFYLRDSYDFNDGNSFISQ CCCCCHHHHHCCCCCCEEEEEEEEEEEECCCCEEEEEHHHCCEEEECCCCCCCCCHHHHC PLGCWGFDGMQCGVRTNLDVPISETVVDEEPSVVQGYKYIVQNSDFRRWSERNQRGGDFM CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCEE VLSNVHRVRLPFPVQLEW EEECCEEEECCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA