Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609734
Identifier: 120609734
GI number: 120609734
Start: 1140948
End: 1141502
Strand: Reverse
Name: 120609734
Synonym: Aave_1041
Alternate gene names: NA
Gene position: 1141502-1140948 (Counterclockwise)
Preceding gene: 120609735
Following gene: 120609733
Centisome position: 21.33
GC content: 72.07
Gene sequence:
>555_bases ATGCCACATCCACGCACCCTGCTGCAACGCCTGCGCCACTGCGCCGCCGGCGGCCTGATCCTGGTGATGCTCGCGGCGTG CTCCACCATCGACCGCGGGACGCCCCCGCCGCTGGAGCGCAATGCCAGCTGGGTGGTCCTGCCGTTCGCGAACCACACGG AAACGCCGCTGGCCGGCAACCGCGCGGAAGCCATCGCCCTGGCCCTGCTGCAGGCACGCGGCGTGGGCCGTGTGCAGCGC TACCCCGGCGGCACGCAGCAGGAGGCCCTGTTCGACGCGGGCGACGCCAAGCGCCAGGAAGAGGTCCTGGCCTGGGCCCG CGAGAAGCAGGCCAAATACGCGCTGGCCGGCGCGGTGGACGAATGGCGCTACAAGGTCGGCGTGGACGGCGAACCCGCGG CCGGCGTGACGCTGCAGATCATCGACGTCGCAACCGGCGAAACGCTCTGGAGCGGCACGGGCGGCAAGAGCGGATGGAGC CGCGAGTCCCTCTCGGGCGTGGCGCAGAAGCTGATCCGCAGCCTGATGGACTCCGGCCTGTCCGGTGCGCGCTGA
Upstream 100 bases:
>100_bases AAATCCGGACTGCAGCTGCAGCAGGGACTCAACCGCAGCCTGCTCTTCAGCTACCGGCTGCATTTCTGACGCGTATCTCC AAACAAGAAAGGACTCTCCC
Downstream 100 bases:
>100_bases CCCCGCCATGCCGCCGGAGAAGTCCCCCCCGCCCTCCCCCGGCCGCCGTCGCGCGGTCGGCGCCGCGCCGGCTTCGGGAC GCACCGGCTTGCGCCCGCTG
Product: putative lipoprotein
Products: NA
Alternate protein names: Outer Membrane Lipoprotein
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MPHPRTLLQRLRHCAAGGLILVMLAACSTIDRGTPPPLERNASWVVLPFANHTETPLAGNRAEAIALALLQARGVGRVQR YPGGTQQEALFDAGDAKRQEEVLAWAREKQAKYALAGAVDEWRYKVGVDGEPAAGVTLQIIDVATGETLWSGTGGKSGWS RESLSGVAQKLIRSLMDSGLSGAR
Sequences:
>Translated_184_residues MPHPRTLLQRLRHCAAGGLILVMLAACSTIDRGTPPPLERNASWVVLPFANHTETPLAGNRAEAIALALLQARGVGRVQR YPGGTQQEALFDAGDAKRQEEVLAWAREKQAKYALAGAVDEWRYKVGVDGEPAAGVTLQIIDVATGETLWSGTGGKSGWS RESLSGVAQKLIRSLMDSGLSGAR >Mature_183_residues PHPRTLLQRLRHCAAGGLILVMLAACSTIDRGTPPPLERNASWVVLPFANHTETPLAGNRAEAIALALLQARGVGRVQRY PGGTQQEALFDAGDAKRQEEVLAWAREKQAKYALAGAVDEWRYKVGVDGEPAAGVTLQIIDVATGETLWSGTGGKSGWSR ESLSGVAQKLIRSLMDSGLSGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19625; Mature: 19493
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHPRTLLQRLRHCAAGGLILVMLAACSTIDRGTPPPLERNASWVVLPFANHTETPLAGN CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCC RAEAIALALLQARGVGRVQRYPGGTQQEALFDAGDAKRQEEVLAWAREKQAKYALAGAVD HHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EWRYKVGVDGEPAAGVTLQIIDVATGETLWSGTGGKSGWSRESLSGVAQKLIRSLMDSGL HHEEEECCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCC SGAR CCCC >Mature Secondary Structure PHPRTLLQRLRHCAAGGLILVMLAACSTIDRGTPPPLERNASWVVLPFANHTETPLAGN CCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCC RAEAIALALLQARGVGRVQRYPGGTQQEALFDAGDAKRQEEVLAWAREKQAKYALAGAVD HHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EWRYKVGVDGEPAAGVTLQIIDVATGETLWSGTGGKSGWSRESLSGVAQKLIRSLMDSGL HHEEEECCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCC SGAR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA