Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609732
Identifier: 120609732
GI number: 120609732
Start: 1138531
End: 1139544
Strand: Reverse
Name: 120609732
Synonym: Aave_1039
Alternate gene names: NA
Gene position: 1139544-1138531 (Counterclockwise)
Preceding gene: 120609733
Following gene: 120609731
Centisome position: 21.29
GC content: 70.61
Gene sequence:
>1014_bases ATGCTTAACCTCAAGCTCGGCATGTCGGCCTTCCTGCTGGAACTGGGCGCCTGGAGCGGCCCCCTGATGCTGCAGGGCCG CTCCGACGCGGCCCTGGCGAGCTACCTGATCGTGCACGCGCTGGCCTGCTCCATGCTCGCGCTGTGCCTGCTGCCGCTGC TCTCGGGCGAGCAGGCCCGCCCCCGCCTGCCCGTGCTGGTGCTCATGGCCGCCTTCAGCTACGCCGTCCCCATCGCCGGA TTCATCGGCGTGGCGGTGGGCGTGGTGGTGCTGCGCCTGTACCGTTCGCCGACCGGGCAGGACGATTTCGAATCCCTGCA ACTGCCCGAATTCGACCTGCACCAGCGCATGCAGGCGAGCTTCCGGCAGGCCGGGCTGCGGTCCTTCCTGGGCAACGCCC AGGCCCCCATGCAGACCCGCATGCGCGCCATGGTGGCGCTGCAGCACGTCTCCGGCCGCATCGCCTCGCCCCTGCTGCGC AGCATCCTCAGCGATCCGAGCGAAGACCTGCGGCTGCTCGCCTACGGCATGCTCGACACGCTGGAAAAGCGCATCAACCG CACCATCGACAGCGAACTCGACGCCATGCGCCGCGCCCAGGCCGAGGAAGGCGCCACGCCCGGCCCGCTGATGCTGGAAT CCGCCCACCGGCTCTCCGACCTCTACTGGGAACTGGTGTACCAGGAACTGGTGCAAGGCGACCTGCGCACCCACGCCATC CACGAATCCCTGCGCTATTGCGACATGGTGCTGGCCCAGTCCCCCGGCAACGCGCAGCTCAACCTGCGGCGCGGGCGCCT GCTGCACGCGCAGGGCCGCACCGACGAGGCGGGCGAGGCCTATGCCCGCGCGCGGGAACTGGGACTGCCGGCCACGCGCG TGCTGCCCTACCAGGCCGAGCTGTGCTTCGAGCGGCGCGACTACGTGCAGGCCCGTGCGCTGCTGCAGGAACTCGGCCAG TGGCGCGCCCTGCCGCGCCTGCGGCCGGTGCTCGACTACTGGAACGCCCGATGA
Upstream 100 bases:
>100_bases AAGGGTGGCCAGCCGCTCGCCGAATCCGGCATCTTCCCGCACGTGTTGCCCCTGGAGGGCGAGCCACTCGCGGTGCTGGA GCAACTGCACAGGATCGCCC
Downstream 100 bases:
>100_bases GCGACGTCCGCCCCCAGGCCCAGGAAGCCGACATCGCACTGCTGCTCGAAGGCACGTTCCCCTACGTGAGCGGGGGCGTG TCGAGCTGGATCAACCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MLNLKLGMSAFLLELGAWSGPLMLQGRSDAALASYLIVHALACSMLALCLLPLLSGEQARPRLPVLVLMAAFSYAVPIAG FIGVAVGVVVLRLYRSPTGQDDFESLQLPEFDLHQRMQASFRQAGLRSFLGNAQAPMQTRMRAMVALQHVSGRIASPLLR SILSDPSEDLRLLAYGMLDTLEKRINRTIDSELDAMRRAQAEEGATPGPLMLESAHRLSDLYWELVYQELVQGDLRTHAI HESLRYCDMVLAQSPGNAQLNLRRGRLLHAQGRTDEAGEAYARARELGLPATRVLPYQAELCFERRDYVQARALLQELGQ WRALPRLRPVLDYWNAR
Sequences:
>Translated_337_residues MLNLKLGMSAFLLELGAWSGPLMLQGRSDAALASYLIVHALACSMLALCLLPLLSGEQARPRLPVLVLMAAFSYAVPIAG FIGVAVGVVVLRLYRSPTGQDDFESLQLPEFDLHQRMQASFRQAGLRSFLGNAQAPMQTRMRAMVALQHVSGRIASPLLR SILSDPSEDLRLLAYGMLDTLEKRINRTIDSELDAMRRAQAEEGATPGPLMLESAHRLSDLYWELVYQELVQGDLRTHAI HESLRYCDMVLAQSPGNAQLNLRRGRLLHAQGRTDEAGEAYARARELGLPATRVLPYQAELCFERRDYVQARALLQELGQ WRALPRLRPVLDYWNAR >Mature_337_residues MLNLKLGMSAFLLELGAWSGPLMLQGRSDAALASYLIVHALACSMLALCLLPLLSGEQARPRLPVLVLMAAFSYAVPIAG FIGVAVGVVVLRLYRSPTGQDDFESLQLPEFDLHQRMQASFRQAGLRSFLGNAQAPMQTRMRAMVALQHVSGRIASPLLR SILSDPSEDLRLLAYGMLDTLEKRINRTIDSELDAMRRAQAEEGATPGPLMLESAHRLSDLYWELVYQELVQGDLRTHAI HESLRYCDMVLAQSPGNAQLNLRRGRLLHAQGRTDEAGEAYARARELGLPATRVLPYQAELCFERRDYVQARALLQELGQ WRALPRLRPVLDYWNAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37645; Mature: 37645
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNLKLGMSAFLLELGAWSGPLMLQGRSDAALASYLIVHALACSMLALCLLPLLSGEQAR CCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PRLPVLVLMAAFSYAVPIAGFIGVAVGVVVLRLYRSPTGQDDFESLQLPEFDLHQRMQAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHH FRQAGLRSFLGNAQAPMQTRMRAMVALQHVSGRIASPLLRSILSDPSEDLRLLAYGMLDT HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LEKRINRTIDSELDAMRRAQAEEGATPGPLMLESAHRLSDLYWELVYQELVQGDLRTHAI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HESLRYCDMVLAQSPGNAQLNLRRGRLLHAQGRTDEAGEAYARARELGLPATRVLPYQAE HHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHCCHHHH LCFERRDYVQARALLQELGQWRALPRLRPVLDYWNAR HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC >Mature Secondary Structure MLNLKLGMSAFLLELGAWSGPLMLQGRSDAALASYLIVHALACSMLALCLLPLLSGEQAR CCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PRLPVLVLMAAFSYAVPIAGFIGVAVGVVVLRLYRSPTGQDDFESLQLPEFDLHQRMQAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHH FRQAGLRSFLGNAQAPMQTRMRAMVALQHVSGRIASPLLRSILSDPSEDLRLLAYGMLDT HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LEKRINRTIDSELDAMRRAQAEEGATPGPLMLESAHRLSDLYWELVYQELVQGDLRTHAI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HESLRYCDMVLAQSPGNAQLNLRRGRLLHAQGRTDEAGEAYARARELGLPATRVLPYQAE HHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHCCHHHH LCFERRDYVQARALLQELGQWRALPRLRPVLDYWNAR HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA