Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609730
Identifier: 120609730
GI number: 120609730
Start: 1135623
End: 1136996
Strand: Reverse
Name: 120609730
Synonym: Aave_1037
Alternate gene names: NA
Gene position: 1136996-1135623 (Counterclockwise)
Preceding gene: 120609731
Following gene: 120609729
Centisome position: 21.24
GC content: 64.48
Gene sequence:
>1374_bases ATGGCCGGCATCGGATTCGAGCTGCGGCGCATGCTGCGCAAGAACACCCTGGTCGGCCTCGTGCAGGCCTACGCCTACGC GGGCGTGATCGGCTCCGGCCCCTGGGTTTTCTCCATCGTGGGCATCCTGCTCATCGGTATCTTCAGCGCGAGCGTGGTGG TGCCGGGCGTGCTCGTCACCCAGTTCCAGACCTCCGTCACCTACATGGTGGCGGGCAGCCTCATCCTCACCGGCCTGGTG CAGCTGGCCTTCACGCGCTTCGTGTCCGACCGCCTCTTCGAAAAGCGCAAGGATTCGATCCTGCCCAACCTCCACGGCCT GCTGCTGGTGACCACGCTGGCCGCCGCGGCCCTGGGCACGCTGGCGCTCTTCACCGTGCTGCCGCAACTGGGGCTGGTGT ACCGCATGCTCATGCTCGCGGGCTTCACCCTCATGTGCGACGTGTGGGTGCTCACCGTGCTGCTGTCGGGCATGAAGCGC TACAAGGAGATCGTGGCGCTCTTCGGCGTGTCGTACGCCGTCATCGTGGTCAGCGCGCTGCTGATGCGGCCCTGGGGCCT GGAAGGACTGCTGGCGGGCTTCGTGCTGGGCAACTACCTGCTGCTCGCGGGCATGTGGCTGCTCGTGGTGCGCGAGTTCA ACCCGCGCGGCCGCATCATCGCCTTCGACTTCGCGGACCGCAAGCTGCTCTACCCCTCCCTGGTCGCCATCGGCTTCCTC TACAACTTCGGGATCTGGGTGGACAAGTTCATGTTCTGGTACTTCCCGCCGACCTCCGAGCCCATCATCGGGGCGCTGCG GGCCTCGCTGATCTACGACCTGCCCGTGTTCCTGGCCTACCTGTCCATCATTCCCGGCATGGCGGTGTTCCTGGTGCGCA TCGAGACCGATTTCGTCGAGTACTACGACAAGTTCTACGACGCCGTGCGCAGCGGCGGCTCGCTGGAGTACATCGAGGCG ATGCGCGACGAGATGGTCTATTCCATCCAGCAGGGCCTCGGGGAGATCGGCAAGATCCAGACGCTGGCCGTGCTCATCAC CTTCGTCGCCGGGCCGGCCATCCTGAGCGGCCTGGGCATTTCGCGCCTCTACCTGCCGCTGCTGCACGTGCAGGTGATCG GCGCGGGGCTGCAGGTGGGGCTGATGGCCATCCTCAACGTGTTCTTCTACCTGGACCAGCGCCGCATCGTGCTCATGCTG TGCCTGCAGTTCGTGCTGCTCAACATGCTGCTGACCGGCTTCACGCTGCATGCGGGTGCCGCGCTGTACGGCTACGGCTT CGCCATCGCCACGCTGCTCACGCTGTGCACGGGCATGTATTTATTGTCTCGACAGCTGAACCGGTTGGAATACGAAACTT TTATGCTGCAATAG
Upstream 100 bases:
>100_bases CCGTGGCGCGCGTGGAGCGCTACTACACCGATACGCTGATGTTCGACCGCTACCGCCGCGTGTACGAACGGGCGTTCGAA CAGACGGAGGGCCCCCGCTG
Downstream 100 bases:
>100_bases CCGGCGGCATTCACAATCGGTGCTCCATACCTGCAGAGAGGGCCCGATGGCACAGCCGAACTTTCCGAACGCACGCGTGG CCCTGCCGGCCTGCCTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Inner Membrane Protein; Transmembrane Protein Cog; Polysaccharide Synthase Transmembrane Protein
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MAGIGFELRRMLRKNTLVGLVQAYAYAGVIGSGPWVFSIVGILLIGIFSASVVVPGVLVTQFQTSVTYMVAGSLILTGLV QLAFTRFVSDRLFEKRKDSILPNLHGLLLVTTLAAAALGTLALFTVLPQLGLVYRMLMLAGFTLMCDVWVLTVLLSGMKR YKEIVALFGVSYAVIVVSALLMRPWGLEGLLAGFVLGNYLLLAGMWLLVVREFNPRGRIIAFDFADRKLLYPSLVAIGFL YNFGIWVDKFMFWYFPPTSEPIIGALRASLIYDLPVFLAYLSIIPGMAVFLVRIETDFVEYYDKFYDAVRSGGSLEYIEA MRDEMVYSIQQGLGEIGKIQTLAVLITFVAGPAILSGLGISRLYLPLLHVQVIGAGLQVGLMAILNVFFYLDQRRIVLML CLQFVLLNMLLTGFTLHAGAALYGYGFAIATLLTLCTGMYLLSRQLNRLEYETFMLQ
Sequences:
>Translated_457_residues MAGIGFELRRMLRKNTLVGLVQAYAYAGVIGSGPWVFSIVGILLIGIFSASVVVPGVLVTQFQTSVTYMVAGSLILTGLV QLAFTRFVSDRLFEKRKDSILPNLHGLLLVTTLAAAALGTLALFTVLPQLGLVYRMLMLAGFTLMCDVWVLTVLLSGMKR YKEIVALFGVSYAVIVVSALLMRPWGLEGLLAGFVLGNYLLLAGMWLLVVREFNPRGRIIAFDFADRKLLYPSLVAIGFL YNFGIWVDKFMFWYFPPTSEPIIGALRASLIYDLPVFLAYLSIIPGMAVFLVRIETDFVEYYDKFYDAVRSGGSLEYIEA MRDEMVYSIQQGLGEIGKIQTLAVLITFVAGPAILSGLGISRLYLPLLHVQVIGAGLQVGLMAILNVFFYLDQRRIVLML CLQFVLLNMLLTGFTLHAGAALYGYGFAIATLLTLCTGMYLLSRQLNRLEYETFMLQ >Mature_456_residues AGIGFELRRMLRKNTLVGLVQAYAYAGVIGSGPWVFSIVGILLIGIFSASVVVPGVLVTQFQTSVTYMVAGSLILTGLVQ LAFTRFVSDRLFEKRKDSILPNLHGLLLVTTLAAAALGTLALFTVLPQLGLVYRMLMLAGFTLMCDVWVLTVLLSGMKRY KEIVALFGVSYAVIVVSALLMRPWGLEGLLAGFVLGNYLLLAGMWLLVVREFNPRGRIIAFDFADRKLLYPSLVAIGFLY NFGIWVDKFMFWYFPPTSEPIIGALRASLIYDLPVFLAYLSIIPGMAVFLVRIETDFVEYYDKFYDAVRSGGSLEYIEAM RDEMVYSIQQGLGEIGKIQTLAVLITFVAGPAILSGLGISRLYLPLLHVQVIGAGLQVGLMAILNVFFYLDQRRIVLMLC LQFVLLNMLLTGFTLHAGAALYGYGFAIATLLTLCTGMYLLSRQLNRLEYETFMLQ
Specific function: Unknown
COG id: COG4267
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50630; Mature: 50498
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIGFELRRMLRKNTLVGLVQAYAYAGVIGSGPWVFSIVGILLIGIFSASVVVPGVLVT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QFQTSVTYMVAGSLILTGLVQLAFTRFVSDRLFEKRKDSILPNLHGLLLVTTLAAAALGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LALFTVLPQLGLVYRMLMLAGFTLMCDVWVLTVLLSGMKRYKEIVALFGVSYAVIVVSAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMRPWGLEGLLAGFVLGNYLLLAGMWLLVVREFNPRGRIIAFDFADRKLLYPSLVAIGFL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHH YNFGIWVDKFMFWYFPPTSEPIIGALRASLIYDLPVFLAYLSIIPGMAVFLVRIETDFVE HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYDKFYDAVRSGGSLEYIEAMRDEMVYSIQQGLGEIGKIQTLAVLITFVAGPAILSGLGI HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH SRLYLPLLHVQVIGAGLQVGLMAILNVFFYLDQRRIVLMLCLQFVLLNMLLTGFTLHAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCH ALYGYGFAIATLLTLCTGMYLLSRQLNRLEYETFMLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AGIGFELRRMLRKNTLVGLVQAYAYAGVIGSGPWVFSIVGILLIGIFSASVVVPGVLVT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QFQTSVTYMVAGSLILTGLVQLAFTRFVSDRLFEKRKDSILPNLHGLLLVTTLAAAALGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LALFTVLPQLGLVYRMLMLAGFTLMCDVWVLTVLLSGMKRYKEIVALFGVSYAVIVVSAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMRPWGLEGLLAGFVLGNYLLLAGMWLLVVREFNPRGRIIAFDFADRKLLYPSLVAIGFL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHH YNFGIWVDKFMFWYFPPTSEPIIGALRASLIYDLPVFLAYLSIIPGMAVFLVRIETDFVE HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYDKFYDAVRSGGSLEYIEAMRDEMVYSIQQGLGEIGKIQTLAVLITFVAGPAILSGLGI HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH SRLYLPLLHVQVIGAGLQVGLMAILNVFFYLDQRRIVLMLCLQFVLLNMLLTGFTLHAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCH ALYGYGFAIATLLTLCTGMYLLSRQLNRLEYETFMLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA