Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609728
Identifier: 120609728
GI number: 120609728
Start: 1133077
End: 1134261
Strand: Reverse
Name: 120609728
Synonym: Aave_1035
Alternate gene names: NA
Gene position: 1134261-1133077 (Counterclockwise)
Preceding gene: 120609729
Following gene: 120609689
Centisome position: 21.19
GC content: 70.55
Gene sequence:
>1185_bases ATGGCCCGTAAGCCTTCCCTCGCCCGCTGGTGCAGCCTGTCGCTGGCCGCCCTGATCGCCGCCTGCGGCGGCGGAGGCGG CGGCTCTTCGCCCGCCAACCCGGCCAACCCCGCCAGCGTCGCCATCGCCTTTGCCGGGCCCGAGGCGGAAACCGTCCACA GCGTGGGTTCGCCCCTGTCGCTCAGCGCCCGCGTCACGGTGAACGGCGCGGACGCCGCGGACGGCACCCCCGTGAATTTC GCGGCGTCGCCCGGAACGTTCTCCGCCACCGGCACCACCCGGTCGGGCGTAGCCACGGTCGCATTCAGCGGCACGGTGCC GGGCCGCCAGCAGCTCAGCGCCTCGGTCGCGGTGCCCTCCGGGTCATCGGCCACCGCCACGGCAAAGGCCACCCGCATCA TGTACCTGCGTCCCGTACCCGCATCGCTCGAGGTGCTGGTGCCGGCCTATTTCCACCCGTCCTCGGGTACCGAATGGGCA CGCCTCGCGGCCGGCGCGGCCGCCCACCCCGGCGTCGCGGTGACGGCCATCATGAACCCCAACAACGGCGAATTCACTTC GGCCGAGGCCGCCTACACGAACGCGCTGGGCACCTTCGTCGCCGCCGGCGGGAAGGTGGTGGGCTATGTCTACACGGGCT ACGGCGCCCGCTCGCTCGCGGCCGTCAAGGCCAACATCGATGCGTACTTCGCGCTCTACGGCCGCGCCGCGATCAGCGGC ATCTTCCTCGACGAAATGTCGTCCGACGCCGCCAAGCTGAGCGGCTACCGCGAGATCTACGCATACATCAAGGCCAAGGG CGCCGACCTGCGCGTGATCGGCAACCCGGGCAGGGTGCCCGACACCGCCGACTACGCCACCGTGGCCGACGTGCTCGTCA CCTTCGAGGACCGCAACAGCACCTACGCCGCTTACGATCCGCGCACCACGCCGTGGCTCTACACCCTGCCCAACAACCGG CAGAGTTCGCTGGTGCACGACACCGCCACCTGCGTCGACATGGTGAAGGCCCTGCAGTCCGCCGGATCCCCCATCTACAA CGCCGGGCTGGTCTACATGACCGACCTGCAGTACGACCCGGTCAGGAACATCGGCAACCCGTGGGCATCGCTGCCCTCGT ACTGGACGGCCCTGCTGCAGACCGTGGCGGCCATGAACCAGGGGCGCCCGCCGCCGGCCTGCTGA
Upstream 100 bases:
>100_bases GCAGCTTCCTGCGTCCGCATGCAGCGTTGCACCAAAAGCTCACCGTACCGGACGACAATCCCGTCCGCCCTCCTCTTTCC CCATCCAGACAGGAATTGCC
Downstream 100 bases:
>100_bases AGCGGCCGGCGCACCTGCGGCGCAGGAGGGTCAGGCCGCGCCGTTCAGCTCGTCCGCGCGCGCCTGCGCCGCGGCGAAGT CGAGGTCGCCGGAATAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MARKPSLARWCSLSLAALIAACGGGGGGSSPANPANPASVAIAFAGPEAETVHSVGSPLSLSARVTVNGADAADGTPVNF AASPGTFSATGTTRSGVATVAFSGTVPGRQQLSASVAVPSGSSATATAKATRIMYLRPVPASLEVLVPAYFHPSSGTEWA RLAAGAAAHPGVAVTAIMNPNNGEFTSAEAAYTNALGTFVAAGGKVVGYVYTGYGARSLAAVKANIDAYFALYGRAAISG IFLDEMSSDAAKLSGYREIYAYIKAKGADLRVIGNPGRVPDTADYATVADVLVTFEDRNSTYAAYDPRTTPWLYTLPNNR QSSLVHDTATCVDMVKALQSAGSPIYNAGLVYMTDLQYDPVRNIGNPWASLPSYWTALLQTVAAMNQGRPPPAC
Sequences:
>Translated_394_residues MARKPSLARWCSLSLAALIAACGGGGGGSSPANPANPASVAIAFAGPEAETVHSVGSPLSLSARVTVNGADAADGTPVNF AASPGTFSATGTTRSGVATVAFSGTVPGRQQLSASVAVPSGSSATATAKATRIMYLRPVPASLEVLVPAYFHPSSGTEWA RLAAGAAAHPGVAVTAIMNPNNGEFTSAEAAYTNALGTFVAAGGKVVGYVYTGYGARSLAAVKANIDAYFALYGRAAISG IFLDEMSSDAAKLSGYREIYAYIKAKGADLRVIGNPGRVPDTADYATVADVLVTFEDRNSTYAAYDPRTTPWLYTLPNNR QSSLVHDTATCVDMVKALQSAGSPIYNAGLVYMTDLQYDPVRNIGNPWASLPSYWTALLQTVAAMNQGRPPPAC >Mature_393_residues ARKPSLARWCSLSLAALIAACGGGGGGSSPANPANPASVAIAFAGPEAETVHSVGSPLSLSARVTVNGADAADGTPVNFA ASPGTFSATGTTRSGVATVAFSGTVPGRQQLSASVAVPSGSSATATAKATRIMYLRPVPASLEVLVPAYFHPSSGTEWAR LAAGAAAHPGVAVTAIMNPNNGEFTSAEAAYTNALGTFVAAGGKVVGYVYTGYGARSLAAVKANIDAYFALYGRAAISGI FLDEMSSDAAKLSGYREIYAYIKAKGADLRVIGNPGRVPDTADYATVADVLVTFEDRNSTYAAYDPRTTPWLYTLPNNRQ SSLVHDTATCVDMVKALQSAGSPIYNAGLVYMTDLQYDPVRNIGNPWASLPSYWTALLQTVAAMNQGRPPPAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40449; Mature: 40317
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKPSLARWCSLSLAALIAACGGGGGGSSPANPANPASVAIAFAGPEAETVHSVGSPLS CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCE LSARVTVNGADAADGTPVNFAASPGTFSATGTTRSGVATVAFSGTVPGRQQLSASVAVPS EEEEEEECCCCCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCHHHCEEEEECCC GSSATATAKATRIMYLRPVPASLEVLVPAYFHPSSGTEWARLAAGAAAHPGVAVTAIMNP CCCCCEEEEEEEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHCCCCCCCCEEEEEEECC NNGEFTSAEAAYTNALGTFVAAGGKVVGYVYTGYGARSLAAVKANIDAYFALYGRAAISG CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEECCCEEEEEHHHHHHHE IFLDEMSSDAAKLSGYREIYAYIKAKGADLRVIGNPGRVPDTADYATVADVLVTFEDRNS EEHHHCCCCHHHHHHHHHEEEEEEECCCEEEEECCCCCCCCCCHHHHHEEEEEEEECCCC TYAAYDPRTTPWLYTLPNNRQSSLVHDTATCVDMVKALQSAGSPIYNAGLVYMTDLQYDP EEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCEEEEECCCCCH VRNIGNPWASLPSYWTALLQTVAAMNQGRPPPAC HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ARKPSLARWCSLSLAALIAACGGGGGGSSPANPANPASVAIAFAGPEAETVHSVGSPLS CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCE LSARVTVNGADAADGTPVNFAASPGTFSATGTTRSGVATVAFSGTVPGRQQLSASVAVPS EEEEEEECCCCCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCHHHCEEEEECCC GSSATATAKATRIMYLRPVPASLEVLVPAYFHPSSGTEWARLAAGAAAHPGVAVTAIMNP CCCCCEEEEEEEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHCCCCCCCCEEEEEEECC NNGEFTSAEAAYTNALGTFVAAGGKVVGYVYTGYGARSLAAVKANIDAYFALYGRAAISG CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEECCCEEEEEHHHHHHHE IFLDEMSSDAAKLSGYREIYAYIKAKGADLRVIGNPGRVPDTADYATVADVLVTFEDRNS EEHHHCCCCHHHHHHHHHEEEEEEECCCEEEEECCCCCCCCCCHHHHHEEEEEEEECCCC TYAAYDPRTTPWLYTLPNNRQSSLVHDTATCVDMVKALQSAGSPIYNAGLVYMTDLQYDP EEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCEEEEECCCCCH VRNIGNPWASLPSYWTALLQTVAAMNQGRPPPAC HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA