Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609701
Identifier: 120609701
GI number: 120609701
Start: 1104875
End: 1105579
Strand: Direct
Name: 120609701
Synonym: Aave_1007
Alternate gene names: NA
Gene position: 1104875-1105579 (Clockwise)
Preceding gene: 120609700
Following gene: 120609702
Centisome position: 20.64
GC content: 70.35
Gene sequence:
>705_bases ATGGCCCGCCTTCCCCGCCTGACGCTTCCCGGCTACCCGCACCACGTGATCCACCGGGGCAACAACCGGCAGTCGGTCTT CGTGGACCGGCAGGACCGCGAAATGCTACTGGAATCGCTCGCCGACCAGGCGCGTGCCTTCGACGTGGCGGTCCACGCCT ACGTGCTGATGGACAACCACTTCCATCTCCTGGCCACGCCGCGCACGGCCGAGGGCCTGCCGCTGCTGATGCAGGCCGTC GGCCGCCGCTACGTGCGCGCCTTCAACCAGCGCCACGGGCGCACGGGAACGTTGTGGGAAGGTCGCTACCGTTCCACCGT GCTCGATCCCGCACGCTACCTGCTGGCCTGCATGGCCTATATCGACCTGAACCCGGTGCGCGCCGGCCTGGTGGCCGATC CCGCGGAGTACCCCTGGTCCAGCCATGCGCATGCTCTGGGCCTGCGGCCCGACCGGCTGGTGACGCCGCACGCGCTCTAC TGGGCCTTGGGGAACACCCCGTTCGCGCGCGAGGCTGCCTATGGCGCGCTGGTGCAGGCGGGGCTCTCCGAGCAGGACCG CCGCCGCATTACCGATGCGACGCTGTCGGGATGGGCGCTCGGCGATGCGGAATTCGCCGCAGCGCTGCAGTCCCAGACGG CGCGGCGGGTGGTGAAGGCGCAGGCAGGGCGTCCGCGCAAACGTATCGTGCCTCCCGAGGACTGA
Upstream 100 bases:
>100_bases GGGCGTGCCGGCCTGAGCCGGACGAAGTCCGGAACGGCTTTTCCGGGCGCGCCCCCGCGGGTCTAATATCGCGGCCCCGC CTCTTCATCCGTGCCCGACC
Downstream 100 bases:
>100_bases CCGCAGGCATGTGAATACACACGACGGACTTTGATGTGTCCCCTATTAAATGTTGATGAACTGCCTGGAAAGAATATTGC GTATCTGACCCTAATTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MARLPRLTLPGYPHHVIHRGNNRQSVFVDRQDREMLLESLADQARAFDVAVHAYVLMDNHFHLLATPRTAEGLPLLMQAV GRRYVRAFNQRHGRTGTLWEGRYRSTVLDPARYLLACMAYIDLNPVRAGLVADPAEYPWSSHAHALGLRPDRLVTPHALY WALGNTPFAREAAYGALVQAGLSEQDRRRITDATLSGWALGDAEFAAALQSQTARRVVKAQAGRPRKRIVPPED
Sequences:
>Translated_234_residues MARLPRLTLPGYPHHVIHRGNNRQSVFVDRQDREMLLESLADQARAFDVAVHAYVLMDNHFHLLATPRTAEGLPLLMQAV GRRYVRAFNQRHGRTGTLWEGRYRSTVLDPARYLLACMAYIDLNPVRAGLVADPAEYPWSSHAHALGLRPDRLVTPHALY WALGNTPFAREAAYGALVQAGLSEQDRRRITDATLSGWALGDAEFAAALQSQTARRVVKAQAGRPRKRIVPPED >Mature_233_residues ARLPRLTLPGYPHHVIHRGNNRQSVFVDRQDREMLLESLADQARAFDVAVHAYVLMDNHFHLLATPRTAEGLPLLMQAVG RRYVRAFNQRHGRTGTLWEGRYRSTVLDPARYLLACMAYIDLNPVRAGLVADPAEYPWSSHAHALGLRPDRLVTPHALYW ALGNTPFAREAAYGALVQAGLSEQDRRRITDATLSGWALGDAEFAAALQSQTARRVVKAQAGRPRKRIVPPED
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26244; Mature: 26113
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLPRLTLPGYPHHVIHRGNNRQSVFVDRQDREMLLESLADQARAFDVAVHAYVLMDNH CCCCCCCCCCCCCHHEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHEEEEEECCC FHLLATPRTAEGLPLLMQAVGRRYVRAFNQRHGRTGTLWEGRYRSTVLDPARYLLACMAY EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHH IDLNPVRAGLVADPAEYPWSSHAHALGLRPDRLVTPHALYWALGNTPFAREAAYGALVQA HCCCCHHCCCEECCCCCCCCCCCEEECCCCCCCCCCHHEEEECCCCCCHHHHHHHHHHHH GLSEQDRRRITDATLSGWALGDAEFAAALQSQTARRVVKAQAGRPRKRIVPPED CCCHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure ARLPRLTLPGYPHHVIHRGNNRQSVFVDRQDREMLLESLADQARAFDVAVHAYVLMDNH CCCCCCCCCCCCHHEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHEEEEEECCC FHLLATPRTAEGLPLLMQAVGRRYVRAFNQRHGRTGTLWEGRYRSTVLDPARYLLACMAY EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHH IDLNPVRAGLVADPAEYPWSSHAHALGLRPDRLVTPHALYWALGNTPFAREAAYGALVQA HCCCCHHCCCEECCCCCCCCCCCEEECCCCCCCCCCHHEEEECCCCCCHHHHHHHHHHHH GLSEQDRRRITDATLSGWALGDAEFAAALQSQTARRVVKAQAGRPRKRIVPPED CCCHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA