Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120609699
Identifier: 120609699
GI number: 120609699
Start: 1103196
End: 1103831
Strand: Direct
Name: 120609699
Synonym: Aave_1005
Alternate gene names: NA
Gene position: 1103196-1103831 (Clockwise)
Preceding gene: 120609698
Following gene: 120609700
Centisome position: 20.61
GC content: 68.24
Gene sequence:
>636_bases ATGACCGAATCCTCCGCCGACGCGGTGCCGCCCTCCAGCGCCGCGAGCGCATCCACCATGCACCGGACCGTGATCGACGA CACGGTCCGCTGGCTGGAGCGTGCGGTCATCGGGCTGAACCTGTGCCCCTTCGCCAAGTCCGTGCACGTGAAGGGGCAGA TCCACTATGTGGTGAGCGAGGCCGAGGATGCGCGCGCGCTCATCGAAGACCTGCAGCGCGAGCTCGAAGCCCTGGCCGAG GCCTCGCCCGAGCAGCGCGACACCACGCTGCTGATGGCGCCGCGCTGCATGGAGGATTTCCTCGACTTCAATGATTTCCT CGGCCTGGCCGATGATCTTGTCGATGCCATGGATCTGGGCGGCATCCTGCAGGTGGCCTCGTTCCATCCGCGCTTCCAGT TCGCCGGCACGGAAGTGGACGACGTGGGCAACGCCACCAACCGGGCGCCGTACCCCACGCTGCACCTGCTGCGCGAAGAA AGCATCGACCGGGCCGTGGAAGCCTTTCCCGAGGCCGAAGCGATCTTCGAGCGCAACATCGAGGTGCTCGAGGAACTGGG GGCCGACGGCTGGGCGGCACTCGACGTCGGGCCGCGCTGCCCGGTGGCGCACGGCGGCGCGCGGAGCGGTGCATGA
Upstream 100 bases:
>100_bases CTGCTCTCCTGAGCGTGGCGGTGGCGCCAGGGGCGCGGCGGGCGGGGCCCGATAAAATCACCCTCCTGCCGATACGCGCG CCAGCCTGCCGAAAGACTCC
Downstream 100 bases:
>100_bases AGAAGACCGCACGGATGGCCGCGCAGGTACTGAAAGCCCCGGCGGCGCGCCGCAATGCAGGCGCGGGTGCGGATGCCCAG GTGCTGCAGGAACTGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MTESSADAVPPSSAASASTMHRTVIDDTVRWLERAVIGLNLCPFAKSVHVKGQIHYVVSEAEDARALIEDLQRELEALAE ASPEQRDTTLLMAPRCMEDFLDFNDFLGLADDLVDAMDLGGILQVASFHPRFQFAGTEVDDVGNATNRAPYPTLHLLREE SIDRAVEAFPEAEAIFERNIEVLEELGADGWAALDVGPRCPVAHGGARSGA
Sequences:
>Translated_211_residues MTESSADAVPPSSAASASTMHRTVIDDTVRWLERAVIGLNLCPFAKSVHVKGQIHYVVSEAEDARALIEDLQRELEALAE ASPEQRDTTLLMAPRCMEDFLDFNDFLGLADDLVDAMDLGGILQVASFHPRFQFAGTEVDDVGNATNRAPYPTLHLLREE SIDRAVEAFPEAEAIFERNIEVLEELGADGWAALDVGPRCPVAHGGARSGA >Mature_210_residues TESSADAVPPSSAASASTMHRTVIDDTVRWLERAVIGLNLCPFAKSVHVKGQIHYVVSEAEDARALIEDLQRELEALAEA SPEQRDTTLLMAPRCMEDFLDFNDFLGLADDLVDAMDLGGILQVASFHPRFQFAGTEVDDVGNATNRAPYPTLHLLREES IDRAVEAFPEAEAIFERNIEVLEELGADGWAALDVGPRCPVAHGGARSGA
Specific function: Unknown
COG id: COG3310
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22903; Mature: 22772
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESSADAVPPSSAASASTMHRTVIDDTVRWLERAVIGLNLCPFAKSVHVKGQIHYVVSE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEEEECC AEDARALIEDLQRELEALAEASPEQRDTTLLMAPRCMEDFLDFNDFLGLADDLVDAMDLG CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHH GILQVASFHPRFQFAGTEVDDVGNATNRAPYPTLHLLREESIDRAVEAFPEAEAIFERNI HHHHHHHCCCCEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH EVLEELGADGWAALDVGPRCPVAHGGARSGA HHHHHCCCCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure TESSADAVPPSSAASASTMHRTVIDDTVRWLERAVIGLNLCPFAKSVHVKGQIHYVVSE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEEEECC AEDARALIEDLQRELEALAEASPEQRDTTLLMAPRCMEDFLDFNDFLGLADDLVDAMDLG CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHH GILQVASFHPRFQFAGTEVDDVGNATNRAPYPTLHLLREESIDRAVEAFPEAEAIFERNI HHHHHHHCCCCEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH EVLEELGADGWAALDVGPRCPVAHGGARSGA HHHHHCCCCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA