Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609685
Identifier: 120609685
GI number: 120609685
Start: 1087520
End: 1088356
Strand: Reverse
Name: 120609685
Synonym: Aave_0991
Alternate gene names: NA
Gene position: 1088356-1087520 (Counterclockwise)
Preceding gene: 120609686
Following gene: 120609684
Centisome position: 20.33
GC content: 66.19
Gene sequence:
>837_bases ATGGCATCGGAACCTCTGGAACTGTATCGGGACAGGCACCACGCGTGCCTGATGTTCTCCGACCTCATCGAGGAGGACGG GCAGGCGGTGCAGGCCAACCAGTTCCTCATCGTGGACGGTGACACCGGGGCGATCATCGACCCGGGCGGGAACCTGGCGT TCAACGAGCTGTTCATGGGCATGAGCAAGCACTTCGCCCCGCACAAGCTCTCCTACCTCATCGCCTCGCACGCCGATCCG GACATCATCGCCTCGCTCGACCGGTGGATGACCAGCACCAAGGCCACGCTGGTGATCTCGCGCATCTGGGAGCGGTTCGC GCCGCATTTCACCAAGGTGGGCAAGACCGAGAACCGCGTGATCGGCGTGCCCGACGCCGGCGGCCACCTGCCCCTGGGCC GGCATGAGCTGGTGCTGCTGCCCGCGCACTTCATGCACTCCGAGGGCAACTTCCATTTCTACGACCCGGTGAGCAGGATT CTCTTCACGGGGGACCTGGGCGTATCGATGACCTCCGGGGCCGAGGCGCGCGAGCCGGTCACCGACCTGCGCCCGCACAT CCCGCGCATGGAGGGCTTCCATCGGCGCTACATGGTTTCCAACAAAATCCTGCGCCTGTGGACGCGCATGGCGCGCCAGC TCGACATCGCCATGCTGGTGCCGCAGCACGGCGCGCCCATCATGGGCCGCCAGGCAATCGCGGACTTCTTCGACTGGATC GAGAACCTGCAGTGCGGTATCGACCTGTTCGACGACCGCGCTTACCAGTTGCCGACGGCGCTCATCGATCCGGCCACGCG GCAGGTGAGGCCGGCGCTGCAGGCGGTGCGGGCCTGA
Upstream 100 bases:
>100_bases CGCCACGAGAAACTGCCCGGCTGAACGTTCGCTTGATGCGCATCAAGCTCCCGCCGGGCCGGTGTCCGTACATTGGCCGT TTCACGACGGACGGGACGCC
Downstream 100 bases:
>100_bases GGACCGGGAGGCTCATTCCCGGACAGAAAGCCGGCCCGGATTCGCACCCTTTCCTGCGGCCCGAGGCCGCGCCTGCCACT TGCTGCATTACAAGGGCTGC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein; Metallo-Beta-Lactamase Family Protein; Flavoprotein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Histidine Kinase; Metallo-Beta-Lactamase Superfamily Domain Protein; Metallo-Beta-Lactamase Superfamily Protein; Diguanylate Cyclase Domain Protein; Metallo-Beta-Lactamase Domain Protein; CDP-Abequose Synthase; Two-Component Sensor Histidine Kinase; Metallo-Beta-Lactamase Superfamily Hydrolase
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MASEPLELYRDRHHACLMFSDLIEEDGQAVQANQFLIVDGDTGAIIDPGGNLAFNELFMGMSKHFAPHKLSYLIASHADP DIIASLDRWMTSTKATLVISRIWERFAPHFTKVGKTENRVIGVPDAGGHLPLGRHELVLLPAHFMHSEGNFHFYDPVSRI LFTGDLGVSMTSGAEAREPVTDLRPHIPRMEGFHRRYMVSNKILRLWTRMARQLDIAMLVPQHGAPIMGRQAIADFFDWI ENLQCGIDLFDDRAYQLPTALIDPATRQVRPALQAVRA
Sequences:
>Translated_278_residues MASEPLELYRDRHHACLMFSDLIEEDGQAVQANQFLIVDGDTGAIIDPGGNLAFNELFMGMSKHFAPHKLSYLIASHADP DIIASLDRWMTSTKATLVISRIWERFAPHFTKVGKTENRVIGVPDAGGHLPLGRHELVLLPAHFMHSEGNFHFYDPVSRI LFTGDLGVSMTSGAEAREPVTDLRPHIPRMEGFHRRYMVSNKILRLWTRMARQLDIAMLVPQHGAPIMGRQAIADFFDWI ENLQCGIDLFDDRAYQLPTALIDPATRQVRPALQAVRA >Mature_277_residues ASEPLELYRDRHHACLMFSDLIEEDGQAVQANQFLIVDGDTGAIIDPGGNLAFNELFMGMSKHFAPHKLSYLIASHADPD IIASLDRWMTSTKATLVISRIWERFAPHFTKVGKTENRVIGVPDAGGHLPLGRHELVLLPAHFMHSEGNFHFYDPVSRIL FTGDLGVSMTSGAEAREPVTDLRPHIPRMEGFHRRYMVSNKILRLWTRMARQLDIAMLVPQHGAPIMGRQAIADFFDWIE NLQCGIDLFDDRAYQLPTALIDPATRQVRPALQAVRA
Specific function: Unknown
COG id: COG0426
COG function: function code C; Uncharacterized flavoproteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31302; Mature: 31171
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASEPLELYRDRHHACLMFSDLIEEDGQAVQANQFLIVDGDTGAIIDPGGNLAFNELFMG CCCCCHHHHHCCCHHHHHHHHHHHHCCCEEECCEEEEEECCCCEEECCCCCCHHHHHHHH MSKHFAPHKLSYLIASHADPDIIASLDRWMTSTKATLVISRIWERFAPHFTKVGKTENRV HHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCE IGVPDAGGHLPLGRHELVLLPAHFMHSEGNFHFYDPVSRILFTGDLGVSMTSGAEAREPV EECCCCCCCCCCCCCCEEEEEHHHHCCCCCEEEECHHHHHEEECCCCCEECCCCCCCCCH TDLRPHIPRMEGFHRRYMVSNKILRLWTRMARQLDIAMLVPQHGAPIMGRQAIADFFDWI HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHH ENLQCGIDLFDDRAYQLPTALIDPATRQVRPALQAVRA HHHHCCCCHHCCCHHHCCHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure ASEPLELYRDRHHACLMFSDLIEEDGQAVQANQFLIVDGDTGAIIDPGGNLAFNELFMG CCCCHHHHHCCCHHHHHHHHHHHHCCCEEECCEEEEEECCCCEEECCCCCCHHHHHHHH MSKHFAPHKLSYLIASHADPDIIASLDRWMTSTKATLVISRIWERFAPHFTKVGKTENRV HHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCE IGVPDAGGHLPLGRHELVLLPAHFMHSEGNFHFYDPVSRILFTGDLGVSMTSGAEAREPV EECCCCCCCCCCCCCCEEEEEHHHHCCCCCEEEECHHHHHEEECCCCCEECCCCCCCCCH TDLRPHIPRMEGFHRRYMVSNKILRLWTRMARQLDIAMLVPQHGAPIMGRQAIADFFDWI HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHH ENLQCGIDLFDDRAYQLPTALIDPATRQVRPALQAVRA HHHHCCCCHHCCCHHHCCHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA