Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is lpxP [H]
Identifier: 120609674
GI number: 120609674
Start: 1076242
End: 1077105
Strand: Direct
Name: lpxP [H]
Synonym: Aave_0980
Alternate gene names: 120609674
Gene position: 1076242-1077105 (Clockwise)
Preceding gene: 120609667
Following gene: 120609675
Centisome position: 20.11
GC content: 72.92
Gene sequence:
>864_bases ATGCCCCCCGCGTTCCGCTTCTTCGCCCGATGGCCATTGCCTGCGCTCCATGCGCTGGGCGCGGTGCTGGGCTGGATCGC GTTCCTCGCGTCGCCCACCTACCGCCGCCGCTTCCTCGCCAATGCTCGCCTGGCCGGCTATCCCTTCGTGCGCGTGCGCG CCGCGGTGGCCCACGCGGGCCGCATGGCGGCCGAGCTGCCGCGCCTGTGGCTGCGCGCCGAGGCGCCGCCGTTCCGCATG GAGGGGGCGGAGTGCGTGGAACAGGCCTGGGCGGCTGGCCGGGGCATCGTCTTCCTCACGCCGCACATCGGCTGCTTCGA GCTGTCGGTGCAGATCGCGGCGCGGCGCTGGGCCGGGGAGCACGGCCCCGTTACGGTACTCTACCGGCCCGCCCGGCAGG CCTGGCTCGCGGAACTCATGCGCACGGCGCGCGACCGGCCAGGGATCCGGGCAGTGCCCACCACGCTCTCGGGCGTGCGG CAGATGATCAAGGCGCTGCGCCGCGGCGAGGCCGTGGGCCTGCTGCCCGACCAGGTGCCGCCCGAAGGGCAGGGTCTTTG GGCGCCGTTCTTCGGACTGCCGGCCTATACGATGACGCTCGCCGCCCGCCTGGTGCAGCAGACAGGCGCCACGGTGGTCC TGGCACGCTGCGAGCGCCTGCCGCGCGGCCGCGGCTACGTGCTGCACCTCGAGCCCCTGGCCGAGCCGCTTTCCCCTTCC CTCGAAACCGCCGTCCTGCAGATCAACCAATCCATGGAACGCATCATCCGACACTCTCCCGACCAATACCTCTGGGGCTA CGGGCGCTACAAGCAACCGCGGGCCGAGGCATCCACGCCGGCCGTGCCGGGAGCGGACGCATGA
Upstream 100 bases:
>100_bases AGCCGTGGCGAACGCTTTAGCAGAGTTGTTTAACGTCGCCCTGCAAGTTGCTCATTTAACTCAGCGACCCCGCCATTCTA CCGACACGGATCTGTCACCG
Downstream 100 bases:
>100_bases CGGCGGGGCGCTTCAATCTCGCCTGCATGCGCGTGCTCGCCCGCCTGCCCCTGCCCGTGCTGCGGGCCCTGGGCTGGGTG CTGGGGCAGGTGATCTACGT
Product: lipid A biosynthesis acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MPPAFRFFARWPLPALHALGAVLGWIAFLASPTYRRRFLANARLAGYPFVRVRAAVAHAGRMAAELPRLWLRAEAPPFRM EGAECVEQAWAAGRGIVFLTPHIGCFELSVQIAARRWAGEHGPVTVLYRPARQAWLAELMRTARDRPGIRAVPTTLSGVR QMIKALRRGEAVGLLPDQVPPEGQGLWAPFFGLPAYTMTLAARLVQQTGATVVLARCERLPRGRGYVLHLEPLAEPLSPS LETAVLQINQSMERIIRHSPDQYLWGYGRYKQPRAEASTPAVPGADA
Sequences:
>Translated_287_residues MPPAFRFFARWPLPALHALGAVLGWIAFLASPTYRRRFLANARLAGYPFVRVRAAVAHAGRMAAELPRLWLRAEAPPFRM EGAECVEQAWAAGRGIVFLTPHIGCFELSVQIAARRWAGEHGPVTVLYRPARQAWLAELMRTARDRPGIRAVPTTLSGVR QMIKALRRGEAVGLLPDQVPPEGQGLWAPFFGLPAYTMTLAARLVQQTGATVVLARCERLPRGRGYVLHLEPLAEPLSPS LETAVLQINQSMERIIRHSPDQYLWGYGRYKQPRAEASTPAVPGADA >Mature_286_residues PPAFRFFARWPLPALHALGAVLGWIAFLASPTYRRRFLANARLAGYPFVRVRAAVAHAGRMAAELPRLWLRAEAPPFRME GAECVEQAWAAGRGIVFLTPHIGCFELSVQIAARRWAGEHGPVTVLYRPARQAWLAELMRTARDRPGIRAVPTTLSGVRQ MIKALRRGEAVGLLPDQVPPEGQGLWAPFFGLPAYTMTLAARLVQQTGATVVLARCERLPRGRGYVLHLEPLAEPLSPSL ETAVLQINQSMERIIRHSPDQYLWGYGRYKQPRAEASTPAVPGADA
Specific function: Unknown
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the htrB/msbB family [H]
Homologues:
Organism=Escherichia coli, GI87082094, Length=205, Percent_Identity=26.8292682926829, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1787292, Length=192, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004960 - InterPro: IPR011920 [H]
Pfam domain/function: PF03279 Lip_A_acyltrans [H]
EC number: 2.3.1.-
Molecular weight: Translated: 31751; Mature: 31620
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPAFRFFARWPLPALHALGAVLGWIAFLASPTYRRRFLANARLAGYPFVRVRAAVAHAG CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH RMAAELPRLWLRAEAPPFRMEGAECVEQAWAAGRGIVFLTPHIGCFELSVQIAARRWAGE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCC HGPVTVLYRPARQAWLAELMRTARDRPGIRAVPTTLSGVRQMIKALRRGEAVGLLPDQVP CCCEEEEECCHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHCCCEECCCCCCCC PEGQGLWAPFFGLPAYTMTLAARLVQQTGATVVLARCERLPRGRGYVLHLEPLAEPLSPS CCCCCCCCHHHCCHHHHHHHHHHHHHHCCCHHEEHHHHHCCCCCCEEEEEHHHCCCCCCH LETAVLQINQSMERIIRHSPDQYLWGYGRYKQPRAEASTPAVPGADA HHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PPAFRFFARWPLPALHALGAVLGWIAFLASPTYRRRFLANARLAGYPFVRVRAAVAHAG CCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH RMAAELPRLWLRAEAPPFRMEGAECVEQAWAAGRGIVFLTPHIGCFELSVQIAARRWAGE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCC HGPVTVLYRPARQAWLAELMRTARDRPGIRAVPTTLSGVRQMIKALRRGEAVGLLPDQVP CCCEEEEECCHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHCCCEECCCCCCCC PEGQGLWAPFFGLPAYTMTLAARLVQQTGATVVLARCERLPRGRGYVLHLEPLAEPLSPS CCCCCCCCHHHCCHHHHHHHHHHHHHHCCCHHEEHHHHHCCCCCCEEEEEHHHCCCCCCH LETAVLQINQSMERIIRHSPDQYLWGYGRYKQPRAEASTPAVPGADA HHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]