Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609620
Identifier: 120609620
GI number: 120609620
Start: 1007856
End: 1008332
Strand: Direct
Name: 120609620
Synonym: Aave_0926
Alternate gene names: NA
Gene position: 1007856-1008332 (Clockwise)
Preceding gene: 120609609
Following gene: 120609624
Centisome position: 18.83
GC content: 75.68
Gene sequence:
>477_bases ATGGTGACAAACACATCCGGCCCCTGGGGCGTTCGGCTCGGCACGCTCGCCCTGTGGGTGCTCGCAGGCGCCAGCGTGGT TTTCTGGGGGCTCCGGCTGGCGGTCCGTCCGGCACCCATCGCCGCCCCCGTCGCGGCGCCCGCGCCGCCGGCTCCGGATG CGCAGGCGCTCGCGCGGCTGCTGGGCGCGGGCCCGGCCGCTCCCGGCGCGCCCGCCGCGCGCGAGCCCAGCCGCTTCGCC CTGCAGGGCGTGCTCGCCGGCACGGCCAGCGGCGGCGGCGCGGCCCTCATCGCCATAGACAACCAGCCCGCGCGTCCGTT CCGCCTGGGAGCCACCGTGGCCGAAGGCCTGGTGGTGCAGTCGCTGGGCCGAAAGCAGGTGCGCCTCGGTCCGCCCCGGG GTGGCGAGGCCACGGTCACCCTCGAAGTGCCTGAAAAAGGAGACGGAGCAACGGGTGTAACAACCGTCGCGCCTTGA
Upstream 100 bases:
>100_bases CTGCGGGCGTTCCTGGCGCGCCGTGCGATGGCGCCTGCGTTGCGGGAGATCACGGTCTTCTGAAAAGTGGGAGACATATC CGGTCAATGATAATCGTGAC
Downstream 100 bases:
>100_bases GCCGCCCCTTCCTTCTTTGCAGACTCAGGCGGGGTCGAGGCCGCCGATCTCGCGGCATTCCCAGGCGCCGTACCCGGGCG CATCCAGCGGCCATTCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MVTNTSGPWGVRLGTLALWVLAGASVVFWGLRLAVRPAPIAAPVAAPAPPAPDAQALARLLGAGPAAPGAPAAREPSRFA LQGVLAGTASGGGAALIAIDNQPARPFRLGATVAEGLVVQSLGRKQVRLGPPRGGEATVTLEVPEKGDGATGVTTVAP
Sequences:
>Translated_158_residues MVTNTSGPWGVRLGTLALWVLAGASVVFWGLRLAVRPAPIAAPVAAPAPPAPDAQALARLLGAGPAAPGAPAAREPSRFA LQGVLAGTASGGGAALIAIDNQPARPFRLGATVAEGLVVQSLGRKQVRLGPPRGGEATVTLEVPEKGDGATGVTTVAP >Mature_158_residues MVTNTSGPWGVRLGTLALWVLAGASVVFWGLRLAVRPAPIAAPVAAPAPPAPDAQALARLLGAGPAAPGAPAAREPSRFA LQGVLAGTASGGGAALIAIDNQPARPFRLGATVAEGLVVQSLGRKQVRLGPPRGGEATVTLEVPEKGDGATGVTTVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15557; Mature: 15557
Theoretical pI: Translated: 11.89; Mature: 11.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTNTSGPWGVRLGTLALWVLAGASVVFWGLRLAVRPAPIAAPVAAPAPPAPDAQALARL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHH LGAGPAAPGAPAAREPSRFALQGVLAGTASGGGAALIAIDNQPARPFRLGATVAEGLVVQ HCCCCCCCCCCCCCCCCHHHHHHHEEECCCCCCEEEEEECCCCCCCEECCHHHHHHHHHH SLGRKQVRLGPPRGGEATVTLEVPEKGDGATGVTTVAP HCCCCEEEECCCCCCCEEEEEECCCCCCCCCCEEEECC >Mature Secondary Structure MVTNTSGPWGVRLGTLALWVLAGASVVFWGLRLAVRPAPIAAPVAAPAPPAPDAQALARL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHH LGAGPAAPGAPAAREPSRFALQGVLAGTASGGGAALIAIDNQPARPFRLGATVAEGLVVQ HCCCCCCCCCCCCCCCCHHHHHHHEEECCCCCCEEEEEECCCCCCCEECCHHHHHHHHHH SLGRKQVRLGPPRGGEATVTLEVPEKGDGATGVTTVAP HCCCCEEEECCCCCCCEEEEEECCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA