Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609584
Identifier: 120609584
GI number: 120609584
Start: 967140
End: 968291
Strand: Direct
Name: 120609584
Synonym: Aave_0890
Alternate gene names: NA
Gene position: 967140-968291 (Clockwise)
Preceding gene: 120609583
Following gene: 120609585
Centisome position: 18.07
GC content: 74.13
Gene sequence:
>1152_bases ATGCCCCTCCACCTGACCGCGCGCCTGCGCCGCGCGGCGCTCGCCCTGTGGCCCGCGCCCATGCGGGTGGACGGCCGCGA ACGCCTGCGGATGGTCCTGGGCGCGCTGCTCGGCGTGCTGCTGGCCGGCATGCTCAGCCGCTGGGTGGGCGGCCAGTGGG GCATGTCGCCCTGGCTGGTCGCGCCGATCGGCGCGAGCGCGGTGCTGGTATTCGGGGTGCCGGCGAGCCCGCTGGCGCAG CCCTGGTCCGTGGTGGGCGGCAACACCCTGTCCGCCCTGGTGGGCGTGGCCTGCGCGGCGCTGGTGCCGGATCCGGCCGT GGCGGGGGCGCTGGCCGTGGCGCTGGCGATCGCGCTCATGGTGCCGCTGCGCTGCCTGCATCCGCCGGGCGGGGCAGCCG CGCTGTTCGTGGTGATGGCGCATGGCGCGTCGCCGCAGTTCGCGCTGTTCCCGGTGATGACCAATTCCCTGCTGCTGGTG GCGGCGGGCATGGCGTGGCATGCGGCCACGGGCAAGCGCTACCCGCACGCGCAGCAGGCCCGTCCCGCTCCCGCGGGTGC GACGGAGGCGCGCGCCGCGGGGCGCTTCACGCCCGAGGACCTGGATGCCGCGCTGGCGCACTACAACCAGGTGCTGGACG TGAGCCGCGACGATCTGGAGGCGCTGCTCCACCATGCCGAGGCCGAGGCCTACCGCCGCAATTTCGGGCAACTGCGCTGC GGCGACATCATGTCGCGCGAGCCGGTCACGGCCGCGTTCGGCACGGGGTTGCAGGAGGCGTGGGCCCTGATGCGCCGCCG CCGCATCAAGGCGCTGCCGGTGGTGGACCGCGCGCGCCGCATCGTGGGCATCGTCACCACGGCCGACTTCATGCGCCAGA TCGATCTCGACGTGCACCACGGCATCGGCGAGCAACTGCGCGCGCTGGTGCGCCGCGTGGGCGCGGTGCATTCCACCAAG CCGGAGGTGGTGGGCCAGATCATGACGCGGCAGGTGCGCGTGGTGAGCGAGCGGCGCCCCGCGCTGGAACTGGTGCCGCT CTTCACGGAAGACGGCCACCACCACATTCCCGTGATCGACGAGGAGCGGCGGCTGGTCGGCATCATCACCCAGTCGGACC TGGTGCGCGCGCTGCACCGGGCCGTGCGCTAG
Upstream 100 bases:
>100_bases ACTTTTTGCACTTGCCTTTCGACCCGACGTTTGAGAGTTGCGTCACGCCGTCCCCGCGCCAGACAACGCGCCGGACTCCG GCGCACGTCCCCGCCATCCC
Downstream 100 bases:
>100_bases CATCGACCCATGCAGACCGGCATCCTCTACGCCACGCTCGCTTATGTGACGTGGGGCGTCTTTCCCGTGTACTTCCACCA GGTGGCCTCGGTGCCGGCGC
Product: CBS domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MPLHLTARLRRAALALWPAPMRVDGRERLRMVLGALLGVLLAGMLSRWVGGQWGMSPWLVAPIGASAVLVFGVPASPLAQ PWSVVGGNTLSALVGVACAALVPDPAVAGALAVALAIALMVPLRCLHPPGGAAALFVVMAHGASPQFALFPVMTNSLLLV AAGMAWHAATGKRYPHAQQARPAPAGATEARAAGRFTPEDLDAALAHYNQVLDVSRDDLEALLHHAEAEAYRRNFGQLRC GDIMSREPVTAAFGTGLQEAWALMRRRRIKALPVVDRARRIVGIVTTADFMRQIDLDVHHGIGEQLRALVRRVGAVHSTK PEVVGQIMTRQVRVVSERRPALELVPLFTEDGHHHIPVIDEERRLVGIITQSDLVRALHRAVR
Sequences:
>Translated_383_residues MPLHLTARLRRAALALWPAPMRVDGRERLRMVLGALLGVLLAGMLSRWVGGQWGMSPWLVAPIGASAVLVFGVPASPLAQ PWSVVGGNTLSALVGVACAALVPDPAVAGALAVALAIALMVPLRCLHPPGGAAALFVVMAHGASPQFALFPVMTNSLLLV AAGMAWHAATGKRYPHAQQARPAPAGATEARAAGRFTPEDLDAALAHYNQVLDVSRDDLEALLHHAEAEAYRRNFGQLRC GDIMSREPVTAAFGTGLQEAWALMRRRRIKALPVVDRARRIVGIVTTADFMRQIDLDVHHGIGEQLRALVRRVGAVHSTK PEVVGQIMTRQVRVVSERRPALELVPLFTEDGHHHIPVIDEERRLVGIITQSDLVRALHRAVR >Mature_382_residues PLHLTARLRRAALALWPAPMRVDGRERLRMVLGALLGVLLAGMLSRWVGGQWGMSPWLVAPIGASAVLVFGVPASPLAQP WSVVGGNTLSALVGVACAALVPDPAVAGALAVALAIALMVPLRCLHPPGGAAALFVVMAHGASPQFALFPVMTNSLLLVA AGMAWHAATGKRYPHAQQARPAPAGATEARAAGRFTPEDLDAALAHYNQVLDVSRDDLEALLHHAEAEAYRRNFGQLRCG DIMSREPVTAAFGTGLQEAWALMRRRRIKALPVVDRARRIVGIVTTADFMRQIDLDVHHGIGEQLRALVRRVGAVHSTKP EVVGQIMTRQVRVVSERRPALELVPLFTEDGHHHIPVIDEERRLVGIITQSDLVRALHRAVR
Specific function: Unknown
COG id: COG3448
COG function: function code T; CBS-domain-containing membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 41247; Mature: 41116
Theoretical pI: Translated: 11.24; Mature: 11.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLHLTARLRRAALALWPAPMRVDGRERLRMVLGALLGVLLAGMLSRWVGGQWGMSPWLV CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE APIGASAVLVFGVPASPLAQPWSVVGGNTLSALVGVACAALVPDPAVAGALAVALAIALM ECCCCCEEEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VPLRCLHPPGGAAALFVVMAHGASPQFALFPVMTNSLLLVAAGMAWHAATGKRYPHAQQA HHHHHCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHC RPAPAGATEARAAGRFTPEDLDAALAHYNQVLDVSRDDLEALLHHAEAEAYRRNFGQLRC CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEC GDIMSREPVTAAFGTGLQEAWALMRRRRIKALPVVDRARRIVGIVTTADFMRQIDLDVHH CHHCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHC GIGEQLRALVRRVGAVHSTKPEVVGQIMTRQVRVVSERRPALELVPLFTEDGHHHIPVID CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEC EERRLVGIITQSDLVRALHRAVR CCCCEEEEECHHHHHHHHHHHCC >Mature Secondary Structure PLHLTARLRRAALALWPAPMRVDGRERLRMVLGALLGVLLAGMLSRWVGGQWGMSPWLV CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE APIGASAVLVFGVPASPLAQPWSVVGGNTLSALVGVACAALVPDPAVAGALAVALAIALM ECCCCCEEEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VPLRCLHPPGGAAALFVVMAHGASPQFALFPVMTNSLLLVAAGMAWHAATGKRYPHAQQA HHHHHCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHC RPAPAGATEARAAGRFTPEDLDAALAHYNQVLDVSRDDLEALLHHAEAEAYRRNFGQLRC CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEC GDIMSREPVTAAFGTGLQEAWALMRRRRIKALPVVDRARRIVGIVTTADFMRQIDLDVHH CHHCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHC GIGEQLRALVRRVGAVHSTKPEVVGQIMTRQVRVVSERRPALELVPLFTEDGHHHIPVID CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEC EERRLVGIITQSDLVRALHRAVR CCCCEEEEECHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]