Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120609574

Identifier: 120609574

GI number: 120609574

Start: 956692

End: 956988

Strand: Direct

Name: 120609574

Synonym: Aave_0880

Alternate gene names: NA

Gene position: 956692-956988 (Clockwise)

Preceding gene: 120609564

Following gene: 120609575

Centisome position: 17.87

GC content: 62.29

Gene sequence:

>297_bases
GTGCTCTTCAGCAGCTTGCGTGCCACCGTGCTTTTCCTTTGGAATCAACAGGTTGCGCGAGCGGGTGCTGCGCATCGGCT
GCCTGCCGCGCAGCACGCTGCTGCCGGGCTGCTGCCAAGCCAGCAATGCGGCGGAAAACGCGCATGCTTATGCGCTTGCA
GCAGCAGTGGCTGCTGCTGCAGCCGCAAAACGACTATCGATCCTTGGAATCCTTATTTGCCGCCAGGGGGATGCCGTCCC
AACAATGGGCTCATGCGGCAGTGCAGCGCCTTTGCCGGCCGCGGACCTTTCCTTTGA

Upstream 100 bases:

>100_bases
CTGCAGGCTGCCGGAAACGGCGACGAGATTCAGGGTTCGGGCCATGGTGATCCAGTGGTTGCGGTGAAGTGAAGGAGCGG
CACCGCGGCGCGGTGTCCGT

Downstream 100 bases:

>100_bases
CTGCCCATGCCACCCGTCCATTTCCTGAAGGCCTTTCCCGAAGACGGCGATGCGCCGGCCCGGCACCGGTACGCGGCACC
GCTGCTCACGCTGCCGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MLFSSLRATVLFLWNQQVARAGAAHRLPAAQHAAAGLLPSQQCGGKRACLCACSSSGCCCSRKTTIDPWNPYLPPGGCRP
NNGLMRQCSAFAGRGPFL

Sequences:

>Translated_98_residues
MLFSSLRATVLFLWNQQVARAGAAHRLPAAQHAAAGLLPSQQCGGKRACLCACSSSGCCCSRKTTIDPWNPYLPPGGCRP
NNGLMRQCSAFAGRGPFL
>Mature_98_residues
MLFSSLRATVLFLWNQQVARAGAAHRLPAAQHAAAGLLPSQQCGGKRACLCACSSSGCCCSRKTTIDPWNPYLPPGGCRP
NNGLMRQCSAFAGRGPFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10352; Mature: 10352

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS00022 EGF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
11.2 %Cys+Met (Translated Protein)
9.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
11.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFSSLRATVLFLWNQQVARAGAAHRLPAAQHAAAGLLPSQQCGGKRACLCACSSSGCCC
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCCCC
SRKTTIDPWNPYLPPGGCRPNNGLMRQCSAFAGRGPFL
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLFSSLRATVLFLWNQQVARAGAAHRLPAAQHAAAGLLPSQQCGGKRACLCACSSSGCCC
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCCCC
SRKTTIDPWNPYLPPGGCRPNNGLMRQCSAFAGRGPFL
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA