Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609574
Identifier: 120609574
GI number: 120609574
Start: 956692
End: 956988
Strand: Direct
Name: 120609574
Synonym: Aave_0880
Alternate gene names: NA
Gene position: 956692-956988 (Clockwise)
Preceding gene: 120609564
Following gene: 120609575
Centisome position: 17.87
GC content: 62.29
Gene sequence:
>297_bases GTGCTCTTCAGCAGCTTGCGTGCCACCGTGCTTTTCCTTTGGAATCAACAGGTTGCGCGAGCGGGTGCTGCGCATCGGCT GCCTGCCGCGCAGCACGCTGCTGCCGGGCTGCTGCCAAGCCAGCAATGCGGCGGAAAACGCGCATGCTTATGCGCTTGCA GCAGCAGTGGCTGCTGCTGCAGCCGCAAAACGACTATCGATCCTTGGAATCCTTATTTGCCGCCAGGGGGATGCCGTCCC AACAATGGGCTCATGCGGCAGTGCAGCGCCTTTGCCGGCCGCGGACCTTTCCTTTGA
Upstream 100 bases:
>100_bases CTGCAGGCTGCCGGAAACGGCGACGAGATTCAGGGTTCGGGCCATGGTGATCCAGTGGTTGCGGTGAAGTGAAGGAGCGG CACCGCGGCGCGGTGTCCGT
Downstream 100 bases:
>100_bases CTGCCCATGCCACCCGTCCATTTCCTGAAGGCCTTTCCCGAAGACGGCGATGCGCCGGCCCGGCACCGGTACGCGGCACC GCTGCTCACGCTGCCGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MLFSSLRATVLFLWNQQVARAGAAHRLPAAQHAAAGLLPSQQCGGKRACLCACSSSGCCCSRKTTIDPWNPYLPPGGCRP NNGLMRQCSAFAGRGPFL
Sequences:
>Translated_98_residues MLFSSLRATVLFLWNQQVARAGAAHRLPAAQHAAAGLLPSQQCGGKRACLCACSSSGCCCSRKTTIDPWNPYLPPGGCRP NNGLMRQCSAFAGRGPFL >Mature_98_residues MLFSSLRATVLFLWNQQVARAGAAHRLPAAQHAAAGLLPSQQCGGKRACLCACSSSGCCCSRKTTIDPWNPYLPPGGCRP NNGLMRQCSAFAGRGPFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10352; Mature: 10352
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS00022 EGF_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 11.2 %Cys+Met (Translated Protein) 9.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 11.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFSSLRATVLFLWNQQVARAGAAHRLPAAQHAAAGLLPSQQCGGKRACLCACSSSGCCC CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCCCC SRKTTIDPWNPYLPPGGCRPNNGLMRQCSAFAGRGPFL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MLFSSLRATVLFLWNQQVARAGAAHRLPAAQHAAAGLLPSQQCGGKRACLCACSSSGCCC CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCCCC SRKTTIDPWNPYLPPGGCRPNNGLMRQCSAFAGRGPFL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA