Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609549
Identifier: 120609549
GI number: 120609549
Start: 926418
End: 927020
Strand: Direct
Name: 120609549
Synonym: Aave_0855
Alternate gene names: NA
Gene position: 926418-927020 (Clockwise)
Preceding gene: 120609547
Following gene: 120609550
Centisome position: 17.31
GC content: 70.65
Gene sequence:
>603_bases ATGTCCAACGCCCTCGCCACCGAGATCGCCAGTGCCGCCGCCCGCTTCGTCGTCGAGGAGGGGCTCGAATGGGGCCCCGC CAAGCGCCGGGCCGTCCGGCAACTGGGCCTGCCCGCGCGCACCCCGCTGCCCGACAACGACCTCGTGGAAGACGCCGTGC GCGAATACATCGGCCTCTTCTGCGCCGACACCCAGCCGGCCGAGCTGCGGGCGCTGCGGGAACTGGCCCTCGTCTGGATG CAGCGCATGGCGGAGTTCCGGCCGCACCTCGGCGGGGCCGTCTGGTACGGCACGGCCACCCGGCTGTCGGACATCTATCT GCAGCTCTTCTGCGACGACTGCAAATCCGCGGAGATCGCCCTCATCGACCACCACGTGGACTACGAACCCCGCACGGTCA CCGGTTTCCACGGCGAGTCGGTGGAGGCGCTCAGTCTCTCCAGCCTGGCCCCGGGCCTGGGCGAAACCGTGGGCGTGCAC CTGCTTGTCTATGATCTGGACGACCTGCGCGGTGCGCTGCGCCCCGATGCGCGAGGGCGCGTGCCCCGTGGCGATGCGCG GGCAGTGCGCCGGCTGCTGGACAACGAGGACAGACCCGAATGA
Upstream 100 bases:
>100_bases GGCGTGGCCCAAGACCCCGCGCCGGACGTGCGCTTTGCGCACCACGCCCGCGGCCCGTCAGGCCACAATGCGGGTATTCC CTCCCGACCGAGACGCCGCC
Downstream 100 bases:
>100_bases CCGATCCCACCCCGGCGGCCGGAGCCGCCGTCTCTTCCGACGCCGCACCCGCCAGTCCCCCGCGGCGCAGGGCCCTCTAT GCGGCCGCCGCCGCCGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSNALATEIASAAARFVVEEGLEWGPAKRRAVRQLGLPARTPLPDNDLVEDAVREYIGLFCADTQPAELRALRELALVWM QRMAEFRPHLGGAVWYGTATRLSDIYLQLFCDDCKSAEIALIDHHVDYEPRTVTGFHGESVEALSLSSLAPGLGETVGVH LLVYDLDDLRGALRPDARGRVPRGDARAVRRLLDNEDRPE
Sequences:
>Translated_200_residues MSNALATEIASAAARFVVEEGLEWGPAKRRAVRQLGLPARTPLPDNDLVEDAVREYIGLFCADTQPAELRALRELALVWM QRMAEFRPHLGGAVWYGTATRLSDIYLQLFCDDCKSAEIALIDHHVDYEPRTVTGFHGESVEALSLSSLAPGLGETVGVH LLVYDLDDLRGALRPDARGRVPRGDARAVRRLLDNEDRPE >Mature_199_residues SNALATEIASAAARFVVEEGLEWGPAKRRAVRQLGLPARTPLPDNDLVEDAVREYIGLFCADTQPAELRALRELALVWMQ RMAEFRPHLGGAVWYGTATRLSDIYLQLFCDDCKSAEIALIDHHVDYEPRTVTGFHGESVEALSLSSLAPGLGETVGVHL LVYDLDDLRGALRPDARGRVPRGDARAVRRLLDNEDRPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22130; Mature: 21999
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNALATEIASAAARFVVEEGLEWGPAKRRAVRQLGLPARTPLPDNDLVEDAVREYIGLF CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH CADTQPAELRALRELALVWMQRMAEFRPHLGGAVWYGTATRLSDIYLQLFCDDCKSAEIA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCEE LIDHHVDYEPRTVTGFHGESVEALSLSSLAPGLGETVGVHLLVYDLDDLRGALRPDARGR EEECCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCHHHHEEEEEEHHHHHHHCCCCCCCC VPRGDARAVRRLLDNEDRPE CCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure SNALATEIASAAARFVVEEGLEWGPAKRRAVRQLGLPARTPLPDNDLVEDAVREYIGLF CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH CADTQPAELRALRELALVWMQRMAEFRPHLGGAVWYGTATRLSDIYLQLFCDDCKSAEIA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCEE LIDHHVDYEPRTVTGFHGESVEALSLSSLAPGLGETVGVHLLVYDLDDLRGALRPDARGR EEECCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCHHHHEEEEEEHHHHHHHCCCCCCCC VPRGDARAVRRLLDNEDRPE CCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA