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The map label for this gene is oxyR [H]

Identifier: 120609294

GI number: 120609294

Start: 651313

End: 652278

Strand: Direct

Name: oxyR [H]

Synonym: Aave_0594

Alternate gene names: 120609294

Gene position: 651313-652278 (Clockwise)

Preceding gene: 120609293

Following gene: 120609295

Centisome position: 12.17

GC content: 68.63

Gene sequence:

>966_bases
ATGACCCTCACAGAACTCAAATACATCGTCGCCGTTGCACGGGAGAAGCACTTCGGCCGCGCGGCGGACGCCTGCTACGT
GTCGCAGCCCACCCTTTCGGTGGCGATCAAGAAGCTCGAGGACGAGCTGGAGGTCAAGCTCTTCGAGCGCAGCGCGGGCG
AGGTGTCGGTGACGTCGCTGGGCGAGGAGATCGTGCGCCAGGCCCAGAGCGTGCTGGAACAGGCCGCCGCCATCAAGGAA
ATCGCCAAGCGCGGCAAGGATCCGCTGGCCGGCGTGCTCACGCTGGGCGTGATCTACACCATCGGCCCCTATCTGCTGCC
CGAGCTGGTGCGGCACGCCATCGCCCGCACCCCCCAGATGCCGCTCATGCTGCAGGAGAACTTCACCGTCAAGCTGCTGG
AGATGCTGCGCACCGGCGAGATCGACTGCGCCATCATGGCCGAGCCTTTCCCGGACACGGGCCTCGCCATGGCGCCGCTC
TACGACGAGCCTTTCCTGGCGGCGGTGCCCTCGTCCCACCCCCTCGCCGAGCGCAAGAGCATCTCCGCTGCCGAACTCAA
GAGCGAGACCATGCTCCTGCTGGGCGCCGGCCACTGCTTCCGCGACCATGTGCTCGAGGTCTGCCCCGAATTCGCGCGCT
ACGCGAGCAACGCCGAGGGCATCCGCCGCACCTTCGAGGGCTCGTCGCTCGAAACCATCAAGCACATGGTGTCCGCGGGC
ATGGGCGTCACGCTGGTGCCGCGCCTGTCCGTGCCGCGCGACGCGCTGCACACCGGCACCAAGCGCCGCAAGAGCGACGA
CACCCACATCCGCTACCTCCCCATCGAGGAGGACGACGGCAGCCCGCCGCCCATGCGCCGCGTGGTCCTGGCCTGGCGCC
GCAGCTTCACGCGCTACGAGGCGATCGCGGCGCTGCGCAACGCCGTGTACGCCTGCGAGCTGCCGGGCGTCACCCGCCTT
TCCTGA

Upstream 100 bases:

>100_bases
GGTCCTGCATCCGTGGCAGACTTGGCGGCCCGTCGCCACGGTCCGCATTCCGTGTCGCGGGCGCACAATCGCACCTTCCG
CATTGCCGACCCTTCAGACA

Downstream 100 bases:

>100_bases
GAAGGGCCGGGCCCGTTTCCCCCAAGGCCCGCGGGGCTCCGGGGGGAAACGGCGCGATTGCGATACAGTTTCCCTGATTT
CCAGCCCATCCAACGAAGGA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MTLTELKYIVAVAREKHFGRAADACYVSQPTLSVAIKKLEDELEVKLFERSAGEVSVTSLGEEIVRQAQSVLEQAAAIKE
IAKRGKDPLAGVLTLGVIYTIGPYLLPELVRHAIARTPQMPLMLQENFTVKLLEMLRTGEIDCAIMAEPFPDTGLAMAPL
YDEPFLAAVPSSHPLAERKSISAAELKSETMLLLGAGHCFRDHVLEVCPEFARYASNAEGIRRTFEGSSLETIKHMVSAG
MGVTLVPRLSVPRDALHTGTKRRKSDDTHIRYLPIEEDDGSPPPMRRVVLAWRRSFTRYEAIAALRNAVYACELPGVTRL
S

Sequences:

>Translated_321_residues
MTLTELKYIVAVAREKHFGRAADACYVSQPTLSVAIKKLEDELEVKLFERSAGEVSVTSLGEEIVRQAQSVLEQAAAIKE
IAKRGKDPLAGVLTLGVIYTIGPYLLPELVRHAIARTPQMPLMLQENFTVKLLEMLRTGEIDCAIMAEPFPDTGLAMAPL
YDEPFLAAVPSSHPLAERKSISAAELKSETMLLLGAGHCFRDHVLEVCPEFARYASNAEGIRRTFEGSSLETIKHMVSAG
MGVTLVPRLSVPRDALHTGTKRRKSDDTHIRYLPIEEDDGSPPPMRRVVLAWRRSFTRYEAIAALRNAVYACELPGVTRL
S
>Mature_320_residues
TLTELKYIVAVAREKHFGRAADACYVSQPTLSVAIKKLEDELEVKLFERSAGEVSVTSLGEEIVRQAQSVLEQAAAIKEI
AKRGKDPLAGVLTLGVIYTIGPYLLPELVRHAIARTPQMPLMLQENFTVKLLEMLRTGEIDCAIMAEPFPDTGLAMAPLY
DEPFLAAVPSSHPLAERKSISAAELKSETMLLLGAGHCFRDHVLEVCPEFARYASNAEGIRRTFEGSSLETIKHMVSAGM
GVTLVPRLSVPRDALHTGTKRRKSDDTHIRYLPIEEDDGSPPPMRRVVLAWRRSFTRYEAIAALRNAVYACELPGVTRLS

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=306, Percent_Identity=39.5424836601307, Blast_Score=202, Evalue=2e-53,
Organism=Escherichia coli, GI1787530, Length=256, Percent_Identity=30.46875, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1788887, Length=257, Percent_Identity=30.7392996108949, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI157672245, Length=235, Percent_Identity=31.063829787234, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI2367136, Length=250, Percent_Identity=30.8, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1788748, Length=257, Percent_Identity=26.4591439688716, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787879, Length=291, Percent_Identity=28.5223367697594, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI145693105, Length=253, Percent_Identity=26.4822134387352, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788296, Length=249, Percent_Identity=25.3012048192771, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1787601, Length=192, Percent_Identity=28.125, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788481, Length=265, Percent_Identity=26.7924528301887, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1790208, Length=249, Percent_Identity=27.710843373494, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87081904, Length=179, Percent_Identity=29.608938547486, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790262, Length=248, Percent_Identity=25, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1786401, Length=247, Percent_Identity=29.1497975708502, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI87082132, Length=254, Percent_Identity=22.8346456692913, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35426; Mature: 35294

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTELKYIVAVAREKHFGRAADACYVSQPTLSVAIKKLEDELEVKLFERSAGEVSVTSL
CCHHHHHHHHHHHHHHHCCCHHCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH
GEEIVRQAQSVLEQAAAIKEIAKRGKDPLAGVLTLGVIYTIGPYLLPELVRHAIARTPQM
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLMLQENFTVKLLEMLRTGEIDCAIMAEPFPDTGLAMAPLYDEPFLAAVPSSHPLAERKS
CEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCEECCCCCCCCEEECCCCCCCHHHHC
ISAAELKSETMLLLGAGHCFRDHVLEVCPEFARYASNAEGIRRTFEGSSLETIKHMVSAG
CHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHCC
MGVTLVPRLSVPRDALHTGTKRRKSDDTHIRYLPIEEDDGSPPPMRRVVLAWRRSFTRYE
CCEEEECCCCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
AIAALRNAVYACELPGVTRLS
HHHHHHHHHEEECCCCCCCCC
>Mature Secondary Structure 
TLTELKYIVAVAREKHFGRAADACYVSQPTLSVAIKKLEDELEVKLFERSAGEVSVTSL
CHHHHHHHHHHHHHHHCCCHHCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH
GEEIVRQAQSVLEQAAAIKEIAKRGKDPLAGVLTLGVIYTIGPYLLPELVRHAIARTPQM
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLMLQENFTVKLLEMLRTGEIDCAIMAEPFPDTGLAMAPLYDEPFLAAVPSSHPLAERKS
CEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCEECCCCCCCCEEECCCCCCCHHHHC
ISAAELKSETMLLLGAGHCFRDHVLEVCPEFARYASNAEGIRRTFEGSSLETIKHMVSAG
CHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHCC
MGVTLVPRLSVPRDALHTGTKRRKSDDTHIRYLPIEEDDGSPPPMRRVVLAWRRSFTRYE
CCEEEECCCCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
AIAALRNAVYACELPGVTRLS
HHHHHHHHHEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA