Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609217
Identifier: 120609217
GI number: 120609217
Start: 558175
End: 558627
Strand: Direct
Name: 120609217
Synonym: Aave_0515
Alternate gene names: NA
Gene position: 558175-558627 (Clockwise)
Preceding gene: 120609216
Following gene: 120609218
Centisome position: 10.43
GC content: 63.13
Gene sequence:
>453_bases GTGGAAGCGGGACAACTTCAGGGAGTTCCCAGGAAAGGCACCCTCTATCGCTACTACGTCCCGAGACTGCAGCGCTACGG CGCTGGCACGACGAGCCAGGACCGGTACCGTGCGAAGCCGCTGGAGCAGGCGCTGATCGCGCTGATCGACCGTCTTACGG GGATGGCACTGGATCGCCAGACCCACCACCAGAAGGCCGAGTACCTGCGTGGGATCATCCGCCGCATCAAGGTCTATCCC GATGAGCTCGAAGTGACATTGCTCACTGGAGCCGTGCTACGGACATCCCATGCAGCCAAATTGAAGCCACAGAAGAAGCC GCGCGGCGCACCAGCCTGGCTTGCGCAGGCACGGAGGCTGCGCAAGAAGGGCAACAGCAAGGCCGAAACCGCGCGCTTGC TGCAGGTCCCGTACTCGCAGTTCTGGCGCGCCTCGGTGAAGTACGGGTTGTAG
Upstream 100 bases:
>100_bases CGTGGAGTTCGAGCGCCGCGTCGTCGCCGAGGCGTGTCAGGCAACGGAGATCAACGAGAGAGACCAAATCCCGGCTTGAG AATCAAGCCGATAACCGTCC
Downstream 100 bases:
>100_bases AACGCTGTCCCATCCAGGCAGCGGCGGGCGCCAGCCTGGGCAGTTGTGTCCACGCAATCCTCCCGGCAAGGCCGGCTTTT TTTGCAGATTCCACATTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MEAGQLQGVPRKGTLYRYYVPRLQRYGAGTTSQDRYRAKPLEQALIALIDRLTGMALDRQTHHQKAEYLRGIIRRIKVYP DELEVTLLTGAVLRTSHAAKLKPQKKPRGAPAWLAQARRLRKKGNSKAETARLLQVPYSQFWRASVKYGL
Sequences:
>Translated_150_residues MEAGQLQGVPRKGTLYRYYVPRLQRYGAGTTSQDRYRAKPLEQALIALIDRLTGMALDRQTHHQKAEYLRGIIRRIKVYP DELEVTLLTGAVLRTSHAAKLKPQKKPRGAPAWLAQARRLRKKGNSKAETARLLQVPYSQFWRASVKYGL >Mature_150_residues MEAGQLQGVPRKGTLYRYYVPRLQRYGAGTTSQDRYRAKPLEQALIALIDRLTGMALDRQTHHQKAEYLRGIIRRIKVYP DELEVTLLTGAVLRTSHAAKLKPQKKPRGAPAWLAQARRLRKKGNSKAETARLLQVPYSQFWRASVKYGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17156; Mature: 17156
Theoretical pI: Translated: 11.34; Mature: 11.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAGQLQGVPRKGTLYRYYVPRLQRYGAGTTSQDRYRAKPLEQALIALIDRLTGMALDRQ CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHH THHQKAEYLRGIIRRIKVYPDELEVTLLTGAVLRTSHAAKLKPQKKPRGAPAWLAQARRL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHH RKKGNSKAETARLLQVPYSQFWRASVKYGL HHCCCCHHHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure MEAGQLQGVPRKGTLYRYYVPRLQRYGAGTTSQDRYRAKPLEQALIALIDRLTGMALDRQ CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHH THHQKAEYLRGIIRRIKVYPDELEVTLLTGAVLRTSHAAKLKPQKKPRGAPAWLAQARRL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHH RKKGNSKAETARLLQVPYSQFWRASVKYGL HHCCCCHHHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA