Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yhbN [C]
Identifier: 120609120
GI number: 120609120
Start: 449375
End: 450025
Strand: Direct
Name: yhbN [C]
Synonym: Aave_0417
Alternate gene names: 120609120
Gene position: 449375-450025 (Clockwise)
Preceding gene: 120609119
Following gene: 120609121
Centisome position: 8.4
GC content: 71.58
Gene sequence:
>651_bases ATGAGACCCAGACTCCTCCCCACCCTTCTTCTGCTGGCGTCCATGGCATTCGCCGTGGGGCCGGCCCAGGCCGAAAAAGC CGATCGCAACAAGCCGATGAACATCGAGGCCGACGCACTGCGCCACGATGAGCTCAAGCAGACAAGCGTGTTCACCGGAC GCGTGGTGGTGACCAAGGGCACCATCGTGCTGCGCGGCACCCGGCTGGACGTGCGCCAGGACCCCGACGGGTTCCAGTAC GGCACGATGACGGCCGAGCCCGGCAAGCGGGCTTTCTTCCGCCAGAAGCGCGACACCGCGCCGGGCGCCCCGGACGAGTT CGTCGAGGGCGAAGGCGAGGTGATCGAGTACGACGGACGGGCCGACCTGGTGCGGCTGATCCGGCGCGCGGAGCTGCGCC GCTACCGGGAGTCCACCCTCACCGACGAGATGGCCGGCGCGCTGATCGTCTACAACAACACCACCGACGTCTTCACCGTG GACGGCCAGAAAACCGCGCCCGGGGGCGCCGCGTCGTCCGGCACGCCCGGCGGGCGCGTGCGCGCGGTGCTCTCGCCCAA GGAGTCCGCTTCGGCCCCCGCCGCGGCGCCCGCGCCGGGGGCCGCGCCCGCGCTGCGCCGCAGCAACGAACTGGGCAGCG GGGCGAAGTGA
Upstream 100 bases:
>100_bases GCCTTCCGCCCCGCACGAGCCCGCTCCGGCGGGCTTTTCCTTTCCGGCGGCTGCGCTGCCGCAGCGGAGGACTACAATCT TTGCAAGATTCGTGCCCTCT
Downstream 100 bases:
>100_bases GCATGGCGGCTTCCCACCCACCGGACGCCGCGGCGGCACCGGCGTCGGACGCGCCGAGCCGCCTGGAGGCGATGCATCTC GAGAAGTCCTACGGCACCCG
Product: OstA family protein
Products: NA
Alternate protein names: OstA-Like Protein; OstA Family Protein; OstA-Like Family Protein; Signal Peptide Protein; Lipopolysaccharide Transport Periplasmic Protein Lpta; Cell Envelope Biogenesis Protein YhbN; Protein YhbN; Exported Protein
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MRPRLLPTLLLLASMAFAVGPAQAEKADRNKPMNIEADALRHDELKQTSVFTGRVVVTKGTIVLRGTRLDVRQDPDGFQY GTMTAEPGKRAFFRQKRDTAPGAPDEFVEGEGEVIEYDGRADLVRLIRRAELRRYRESTLTDEMAGALIVYNNTTDVFTV DGQKTAPGGAASSGTPGGRVRAVLSPKESASAPAAAPAPGAAPALRRSNELGSGAK
Sequences:
>Translated_216_residues MRPRLLPTLLLLASMAFAVGPAQAEKADRNKPMNIEADALRHDELKQTSVFTGRVVVTKGTIVLRGTRLDVRQDPDGFQY GTMTAEPGKRAFFRQKRDTAPGAPDEFVEGEGEVIEYDGRADLVRLIRRAELRRYRESTLTDEMAGALIVYNNTTDVFTV DGQKTAPGGAASSGTPGGRVRAVLSPKESASAPAAAPAPGAAPALRRSNELGSGAK >Mature_216_residues MRPRLLPTLLLLASMAFAVGPAQAEKADRNKPMNIEADALRHDELKQTSVFTGRVVVTKGTIVLRGTRLDVRQDPDGFQY GTMTAEPGKRAFFRQKRDTAPGAPDEFVEGEGEVIEYDGRADLVRLIRRAELRRYRESTLTDEMAGALIVYNNTTDVFTV DGQKTAPGGAASSGTPGGRVRAVLSPKESASAPAAAPAPGAAPALRRSNELGSGAK
Specific function: Unknown
COG id: COG1934
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23092; Mature: 23092
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPRLLPTLLLLASMAFAVGPAQAEKADRNKPMNIEADALRHDELKQTSVFTGRVVVTKG CCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEECEEEEEEC TIVLRGTRLDVRQDPDGFQYGTMTAEPGKRAFFRQKRDTAPGAPDEFVEGEGEVIEYDGR EEEEEECEECCCCCCCCCEECCEECCCCHHHHHHHHCCCCCCCCHHHHCCCCCEEEECCH ADLVRLIRRAELRRYRESTLTDEMAGALIVYNNTTDVFTVDGQKTAPGGAASSGTPGGRV HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEE RAVLSPKESASAPAAAPAPGAAPALRRSNELGSGAK EEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC >Mature Secondary Structure MRPRLLPTLLLLASMAFAVGPAQAEKADRNKPMNIEADALRHDELKQTSVFTGRVVVTKG CCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEECEEEEEEC TIVLRGTRLDVRQDPDGFQYGTMTAEPGKRAFFRQKRDTAPGAPDEFVEGEGEVIEYDGR EEEEEECEECCCCCCCCCEECCEECCCCHHHHHHHHCCCCCCCCHHHHCCCCCEEEECCH ADLVRLIRRAELRRYRESTLTDEMAGALIVYNNTTDVFTVDGQKTAPGGAASSGTPGGRV HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEE RAVLSPKESASAPAAAPAPGAAPALRRSNELGSGAK EEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA