Click here to switch to the map view.

The map label for this gene is 120609095

Identifier: 120609095

GI number: 120609095

Start: 421826

End: 422725

Strand: Direct

Name: 120609095

Synonym: Aave_0392

Alternate gene names: NA

Gene position: 421826-422725 (Clockwise)

Preceding gene: 120609094

Following gene: 120609100

Centisome position: 7.88

GC content: 62.33

Gene sequence:

>900_bases
GTGGCAGCTCGGACTGAGAAAAAGGCCACAGCATGCCCTCCTGGTCATGAGAAGCTCCTTTTGCGAGCCGTCGAGATCGC
AAACAGGCCACCCTCCGGTGAGGACATGGCTTTCACCCACTCCGTGCTCTGCCAGGTCGGCTTGCCCCGCGCGAAGGTCG
AAGGGCGCGAGTTCATGCGCCAGTCCGGCGCAGCCTGGGTGAATGTGCAAGCCGGATGGCTGGACGAGGGAAGGGGGCCT
GTACAGCAGCCCATCCCCTACGGCCCGATGCCGCGCCTTGCCCTGGCCTGGGTCTCGACCTACGCCGTGCGCCATGGCAC
GCGCGAAATTCCCATCGGCGATAGCGCGGCCGGTTTCCTGCGCCTGATGGACATGGACAAGGACGGGCGGCGCTATCTCA
CCTTGCGCAAGCAAATGCACGCCTTGGCCGCGTGCCGTTTGCAGCTCGGGTTCAAGGGCCGCACATTCAACGGTCAGCCC
GTCGAGCAGTTCGACGCCTGGGTGTCCAACTGCGAGAGCAAGCAGAGGCCGCTATGGCCAGGCGTCATGACGCTCTCAGA
GCACTATTTCAACGAGCTGCGTGATAGTGCCGTGCCGCTCGATAACCGCGCCCTGCACGCGCTGAAAGGTTCGGCGCTGG
CCCTGGATGTGTATTGCTGGCTGGCCCATCGATTGCACCGCATCGAGGGCAAGGCAGTCATGCTGCATTGGCATTCGTTA
CGCGATCAGTTCGCACAAGAGTACAAAGGCAAGAACGCCGACAAGGACTTCAAGAAGAAGTTTGTCCCTGCTTTATGCAA
GGTGCTGGCCGTCTATCCGGCCGCCAATGTCAAGCAGGTGAAGGGCGGGTTGCGGTTGCTCGGATCGCCGCCCCCTATCC
CCAAGAAGCTCACGTCGTAG

Upstream 100 bases:

>100_bases
CGCTTGAGCGGTGGAGGGCGCAACCACAAGCGCGGTTAAACCGCGCCGGATATCCACGACTGGCGATTCACTGGCTTGGC
TTCGTCAAAAAAACGCAGAG

Downstream 100 bases:

>100_bases
GACCGTCCTGGTGATGCCGGGTCAACGCTCTCACTGGCCGCTTCCTCGCCGCTCTGGTTGCCGTGGTGACACCCCATCGA
GCTGGCCAACTCGATCGTGT

Product: plasmid encoded RepA protein

Products: NA

Alternate protein names: Plasmid Replication Protein; Replication Protein; Plasmid Replication Initiator RepA; RepA Replicase Protein; Replication Protein A; Replicase; RepA-Like Protein; RepA Replication Protein

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MAARTEKKATACPPGHEKLLLRAVEIANRPPSGEDMAFTHSVLCQVGLPRAKVEGREFMRQSGAAWVNVQAGWLDEGRGP
VQQPIPYGPMPRLALAWVSTYAVRHGTREIPIGDSAAGFLRLMDMDKDGRRYLTLRKQMHALAACRLQLGFKGRTFNGQP
VEQFDAWVSNCESKQRPLWPGVMTLSEHYFNELRDSAVPLDNRALHALKGSALALDVYCWLAHRLHRIEGKAVMLHWHSL
RDQFAQEYKGKNADKDFKKKFVPALCKVLAVYPAANVKQVKGGLRLLGSPPPIPKKLTS

Sequences:

>Translated_299_residues
MAARTEKKATACPPGHEKLLLRAVEIANRPPSGEDMAFTHSVLCQVGLPRAKVEGREFMRQSGAAWVNVQAGWLDEGRGP
VQQPIPYGPMPRLALAWVSTYAVRHGTREIPIGDSAAGFLRLMDMDKDGRRYLTLRKQMHALAACRLQLGFKGRTFNGQP
VEQFDAWVSNCESKQRPLWPGVMTLSEHYFNELRDSAVPLDNRALHALKGSALALDVYCWLAHRLHRIEGKAVMLHWHSL
RDQFAQEYKGKNADKDFKKKFVPALCKVLAVYPAANVKQVKGGLRLLGSPPPIPKKLTS
>Mature_298_residues
AARTEKKATACPPGHEKLLLRAVEIANRPPSGEDMAFTHSVLCQVGLPRAKVEGREFMRQSGAAWVNVQAGWLDEGRGPV
QQPIPYGPMPRLALAWVSTYAVRHGTREIPIGDSAAGFLRLMDMDKDGRRYLTLRKQMHALAACRLQLGFKGRTFNGQPV
EQFDAWVSNCESKQRPLWPGVMTLSEHYFNELRDSAVPLDNRALHALKGSALALDVYCWLAHRLHRIEGKAVMLHWHSLR
DQFAQEYKGKNADKDFKKKFVPALCKVLAVYPAANVKQVKGGLRLLGSPPPIPKKLTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33408; Mature: 33277

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARTEKKATACPPGHEKLLLRAVEIANRPPSGEDMAFTHSVLCQVGLPRAKVEGREFMR
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
QSGAAWVNVQAGWLDEGRGPVQQPIPYGPMPRLALAWVSTYAVRHGTREIPIGDSAAGFL
HCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
RLMDMDKDGRRYLTLRKQMHALAACRLQLGFKGRTFNGQPVEQFDAWVSNCESKQRPLWP
HEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
GVMTLSEHYFNELRDSAVPLDNRALHALKGSALALDVYCWLAHRLHRIEGKAVMLHWHSL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHH
RDQFAQEYKGKNADKDFKKKFVPALCKVLAVYPAANVKQVKGGLRLLGSPPPIPKKLTS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEECCCCCCCCCCCCC
>Mature Secondary Structure 
AARTEKKATACPPGHEKLLLRAVEIANRPPSGEDMAFTHSVLCQVGLPRAKVEGREFMR
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
QSGAAWVNVQAGWLDEGRGPVQQPIPYGPMPRLALAWVSTYAVRHGTREIPIGDSAAGFL
HCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
RLMDMDKDGRRYLTLRKQMHALAACRLQLGFKGRTFNGQPVEQFDAWVSNCESKQRPLWP
HEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
GVMTLSEHYFNELRDSAVPLDNRALHALKGSALALDVYCWLAHRLHRIEGKAVMLHWHSL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHH
RDQFAQEYKGKNADKDFKKKFVPALCKVLAVYPAANVKQVKGGLRLLGSPPPIPKKLTS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA