| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is fusA1 [H]
Identifier: 120609038
GI number: 120609038
Start: 366338
End: 368440
Strand: Direct
Name: fusA1 [H]
Synonym: Aave_0335
Alternate gene names: 120609038
Gene position: 366338-368440 (Clockwise)
Preceding gene: 120609037
Following gene: 120609039
Centisome position: 6.84
GC content: 63.29
Gene sequence:
>2103_bases ATGGCACGCAAGACTCCCATCGAGCGCTACCGCAACATCGGTATCTCGGCCCACATCGACGCTGGCAAGACCACGACGAC TGAACGTATCCTGTTCTACACGGGTGTGAACCACAAGATCGGCGAAGTGCACGACGGCGCTGCGACCATGGACTGGATGG AGCAGGAGCAGGAGCGCGGCATCACGATCACGTCCGCCGCCACGACCTGCTTCTGGAAGGGCATGGACATGTCCTACCCC GAGCACCGCTTCAACATCATCGACACCCCCGGCCACGTGGACTTCACCATCGAGGTGGAGCGTTCCATGCGCGTGCTGGA CGGTGCCTGCATGGTCTATTGCGCCGTGGGTGGCGTGCAGCCCCAGTCGGAAACCGTCTGGCGCCAGGCCAACAAGTACA AGGTGCCCCGCCTCGCGTTCGTCAACAAGATGGACCGTACCGGCGCCAACTTCTTCAAGGTCTATGACCAGATGCGCCTG CGCCTGAAGGCCAACCCCGTGCCCGTCGTGATCCCGATCGGCGCCGAGGAAGGTTTCAAGGGCGTGGTCGATCTGCTCAA GATGAAGGCCATCATCTGGGACGAAGCCTCCCAGGGCATGAAGTTCAACTACGAAGAGATCCCGGCCGACCTGGCGGAGT CCGCCAAGGAATGGCGCGAGAAGATGGTCGAGGCCGCTGCCGAAGCGTCCGAAGAGCTGATGAACAAGTACCTGGAAGAG GGCGACCTCTCCGAGGAAGAGATCAAGCTCGGCCTGCGCACGCGCACGATCGCCACCGAGATCCAGCCCATGCTGTGCGG CACGGCGTTCAAGAACAAGGGCGTGCAGCGCATGCTGGACGCCGTGATCGACTACCTGCCTTCGCCCGTGGACATCCCGC CCGTGGCCGGCACGGACGAAGACGAAGCCGAAACCACCCGCAAGGCGGATGACAACGAGAAGTTCTCGGCCCTCGCATTC AAGCTGATGACCGACCCGTTCGTGGGCCAGCTGACCTTCGTGCGCGTGTATTCGGGCGTGCTCTCCAAGGGCGACAGCGT TTACAACCCCGTCAAGGGCAAGAAGGAGCGCATCGGCCGTATCGTGCAGATGCACGCCAACGAACGCCTGGAAGTGGAAG AAATCCGCGCCGGCGACATCGCCGCCTGCGTGGGCCTGAAGGACGTGACCACGGGTGAAACCCTGTGCGATCCCGAAGCC ATCGTGACGCTGGAGCGCATGGTGTTCCCCGAGCCCGTGATCGCGCAGGCCGTGGAGCCCAAGACCAAGACCGACCAGGA AAAGATGGGCATCGCGCTGCAGCGCCTGGCCGCCGAAGATCCGTCCTTCCGCGTGAAGACCGACGAGGAATCCGGCCAGA CCATCATCTCGGGCATGGGCGAGCTCCACCTCGAAATCATCGTGGACCGCATGAAGCGCGAGTTCGGCGTGGAAGCCAAC GTGGGCAAGCCGCAGGTGGCCTACCGCGAAACCATCCGCAAGACGGTGGAAGAGGCCGAAGGCAAGTTCGTGCGCCAGTC CGGCGGCAAGGGCCAGTACGGCCACGTCGTGCTCAAGATCGAGCCGAACGAAGCCGGCAAGGGCATCGAGTTCGTGGACG CCATCAAGGGCGGTGTGGTTCCCCGTGAATTCATCCCGGCCGTGGAAAAGGGCATCAACGAAGCCGTGACCCAGGGCGTG CTGGCCGGCTATCCGGTGGTGGACGTGAAGGTCACGCTGCACTTCGGTTCGTACCACGACGTGGACTCGAACGAACTGGC GTTCAAGATGGCCGCCATCTTCGGCTTCAAGGAAGGTTGCAAGAAGGCCGGTCCGGTCATCCTGGAACCCATGATGGCCG TGGAAGTGGAGACGCCCGAAGACTACGCCGGTACCGTGATGGGCGACCTCTCGTCCCGCCGCGGCATGGTGCAGGGCATG GACGACATGGTCGGCGGCGGCAAGGCCATCAAGGCCGAAGTGCCCCTGTCGGAAATGTTCGGCTACTCGACCGCGCTGCG CTCCGCGACGCAAGGCCGTGCCACGTACACGATGGAGTTCAAGCACTACAGCGAAGCTCCGCGCAACGTGTCCGAAGCCA TCATGGCCGCCCGCGCGAAGTAA
Upstream 100 bases:
>100_bases AGCCACTTCCGCTTCTAAGCCCATCCCTTCATCTCGAAGGCCTGGAGCCCGATCCGCCCCACCGGCGGGCGGGCTCTTTG GCTGTTAACGAAAGACCATC
Downstream 100 bases:
>100_bases GTACCACCCCTGTGTCGCCTGCGGCGCCTCCCCCTCAAGGGGGCGCACGCAGCGGTCCGGCAAAGCCGGTCCCGCGCGTG CCGCTGGCGTGGCCTGCTCC
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G 1 [H]
Number of amino acids: Translated: 700; Mature: 699
Protein sequence:
>700_residues MARKTPIERYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTCFWKGMDMSYP EHRFNIIDTPGHVDFTIEVERSMRVLDGACMVYCAVGGVQPQSETVWRQANKYKVPRLAFVNKMDRTGANFFKVYDQMRL RLKANPVPVVIPIGAEEGFKGVVDLLKMKAIIWDEASQGMKFNYEEIPADLAESAKEWREKMVEAAAEASEELMNKYLEE GDLSEEEIKLGLRTRTIATEIQPMLCGTAFKNKGVQRMLDAVIDYLPSPVDIPPVAGTDEDEAETTRKADDNEKFSALAF KLMTDPFVGQLTFVRVYSGVLSKGDSVYNPVKGKKERIGRIVQMHANERLEVEEIRAGDIAACVGLKDVTTGETLCDPEA IVTLERMVFPEPVIAQAVEPKTKTDQEKMGIALQRLAAEDPSFRVKTDEESGQTIISGMGELHLEIIVDRMKREFGVEAN VGKPQVAYRETIRKTVEEAEGKFVRQSGGKGQYGHVVLKIEPNEAGKGIEFVDAIKGGVVPREFIPAVEKGINEAVTQGV LAGYPVVDVKVTLHFGSYHDVDSNELAFKMAAIFGFKEGCKKAGPVILEPMMAVEVETPEDYAGTVMGDLSSRRGMVQGM DDMVGGGKAIKAEVPLSEMFGYSTALRSATQGRATYTMEFKHYSEAPRNVSEAIMAARAK
Sequences:
>Translated_700_residues MARKTPIERYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTCFWKGMDMSYP EHRFNIIDTPGHVDFTIEVERSMRVLDGACMVYCAVGGVQPQSETVWRQANKYKVPRLAFVNKMDRTGANFFKVYDQMRL RLKANPVPVVIPIGAEEGFKGVVDLLKMKAIIWDEASQGMKFNYEEIPADLAESAKEWREKMVEAAAEASEELMNKYLEE GDLSEEEIKLGLRTRTIATEIQPMLCGTAFKNKGVQRMLDAVIDYLPSPVDIPPVAGTDEDEAETTRKADDNEKFSALAF KLMTDPFVGQLTFVRVYSGVLSKGDSVYNPVKGKKERIGRIVQMHANERLEVEEIRAGDIAACVGLKDVTTGETLCDPEA IVTLERMVFPEPVIAQAVEPKTKTDQEKMGIALQRLAAEDPSFRVKTDEESGQTIISGMGELHLEIIVDRMKREFGVEAN VGKPQVAYRETIRKTVEEAEGKFVRQSGGKGQYGHVVLKIEPNEAGKGIEFVDAIKGGVVPREFIPAVEKGINEAVTQGV LAGYPVVDVKVTLHFGSYHDVDSNELAFKMAAIFGFKEGCKKAGPVILEPMMAVEVETPEDYAGTVMGDLSSRRGMVQGM DDMVGGGKAIKAEVPLSEMFGYSTALRSATQGRATYTMEFKHYSEAPRNVSEAIMAARAK >Mature_699_residues ARKTPIERYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTCFWKGMDMSYPE HRFNIIDTPGHVDFTIEVERSMRVLDGACMVYCAVGGVQPQSETVWRQANKYKVPRLAFVNKMDRTGANFFKVYDQMRLR LKANPVPVVIPIGAEEGFKGVVDLLKMKAIIWDEASQGMKFNYEEIPADLAESAKEWREKMVEAAAEASEELMNKYLEEG DLSEEEIKLGLRTRTIATEIQPMLCGTAFKNKGVQRMLDAVIDYLPSPVDIPPVAGTDEDEAETTRKADDNEKFSALAFK LMTDPFVGQLTFVRVYSGVLSKGDSVYNPVKGKKERIGRIVQMHANERLEVEEIRAGDIAACVGLKDVTTGETLCDPEAI VTLERMVFPEPVIAQAVEPKTKTDQEKMGIALQRLAAEDPSFRVKTDEESGQTIISGMGELHLEIIVDRMKREFGVEANV GKPQVAYRETIRKTVEEAEGKFVRQSGGKGQYGHVVLKIEPNEAGKGIEFVDAIKGGVVPREFIPAVEKGINEAVTQGVL AGYPVVDVKVTLHFGSYHDVDSNELAFKMAAIFGFKEGCKKAGPVILEPMMAVEVETPEDYAGTVMGDLSSRRGMVQGMD DMVGGGKAIKAEVPLSEMFGYSTALRSATQGRATYTMEFKHYSEAPRNVSEAIMAARAK
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=703, Percent_Identity=45.0924608819346, Blast_Score=569, Evalue=1e-162, Organism=Homo sapiens, GI19923640, Length=720, Percent_Identity=39.8611111111111, Blast_Score=470, Evalue=1e-132, Organism=Homo sapiens, GI25306287, Length=720, Percent_Identity=37.7777777777778, Blast_Score=423, Evalue=1e-118, Organism=Homo sapiens, GI25306283, Length=401, Percent_Identity=43.640897755611, Blast_Score=308, Evalue=2e-83, Organism=Homo sapiens, GI4503483, Length=826, Percent_Identity=25.6658595641646, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI157426893, Length=153, Percent_Identity=33.9869281045752, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI94966754, Length=136, Percent_Identity=38.2352941176471, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI310132016, Length=120, Percent_Identity=38.3333333333333, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI310110807, Length=120, Percent_Identity=38.3333333333333, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI310123363, Length=120, Percent_Identity=38.3333333333333, Blast_Score=77, Evalue=6e-14, Organism=Escherichia coli, GI1789738, Length=705, Percent_Identity=72.0567375886525, Blast_Score=1038, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=493, Percent_Identity=27.3833671399594, Blast_Score=159, Evalue=4e-40, Organism=Escherichia coli, GI48994988, Length=182, Percent_Identity=36.2637362637363, Blast_Score=105, Evalue=9e-24, Organism=Escherichia coli, GI1788922, Length=140, Percent_Identity=37.1428571428571, Blast_Score=87, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17533571, Length=691, Percent_Identity=41.534008683068, Blast_Score=518, Evalue=1e-147, Organism=Caenorhabditis elegans, GI17556745, Length=728, Percent_Identity=30.0824175824176, Blast_Score=315, Evalue=4e-86, Organism=Caenorhabditis elegans, GI17506493, Length=825, Percent_Identity=27.1515151515152, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17557151, Length=206, Percent_Identity=32.0388349514563, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71988819, Length=146, Percent_Identity=32.1917808219178, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71988811, Length=146, Percent_Identity=32.1917808219178, Blast_Score=73, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6323098, Length=697, Percent_Identity=42.6111908177905, Blast_Score=553, Evalue=1e-158, Organism=Saccharomyces cerevisiae, GI6322359, Length=793, Percent_Identity=30.8953341740227, Blast_Score=367, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6324707, Length=836, Percent_Identity=25.5980861244019, Blast_Score=176, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6320593, Length=836, Percent_Identity=25.5980861244019, Blast_Score=176, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6323320, Length=226, Percent_Identity=30.0884955752212, Blast_Score=94, Evalue=8e-20, Organism=Saccharomyces cerevisiae, GI6324166, Length=144, Percent_Identity=37.5, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24582462, Length=706, Percent_Identity=45.3257790368272, Blast_Score=594, Evalue=1e-170, Organism=Drosophila melanogaster, GI221458488, Length=740, Percent_Identity=32.027027027027, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI24585709, Length=822, Percent_Identity=25.9124087591241, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI24585711, Length=822, Percent_Identity=25.9124087591241, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI24585713, Length=822, Percent_Identity=25.9124087591241, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI78706572, Length=161, Percent_Identity=35.4037267080745, Blast_Score=102, Evalue=1e-21, Organism=Drosophila melanogaster, GI28574573, Length=142, Percent_Identity=35.9154929577465, Blast_Score=85, Evalue=1e-16,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 77383; Mature: 77251
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKTPIERYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERG CCCCCHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTCFWKGMDMSYPEHRFNIIDTPGHVDFTIEVERSMRVLDGACMVYCAVGGVQ EEEEECHHHHEECCCCCCCCCCCCEEECCCCCEEEEEEECHHHHHHHHHHEEEEECCCCC PQSETVWRQANKYKVPRLAFVNKMDRTGANFFKVYDQMRLRLKANPVPVVIPIGAEEGFK CCHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCEEEEECCCCCCHH GVVDLLKMKAIIWDEASQGMKFNYEEIPADLAESAKEWREKMVEAAAEASEELMNKYLEE HHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GDLSEEEIKLGLRTRTIATEIQPMLCGTAFKNKGVQRMLDAVIDYLPSPVDIPPVAGTDE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCC DEAETTRKADDNEKFSALAFKLMTDPFVGQLTFVRVYSGVLSKGDSVYNPVKGKKERIGR HHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH IVQMHANERLEVEEIRAGDIAACVGLKDVTTGETLCDPEAIVTLERMVFPEPVIAQAVEP HHHHHCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCC KTKTDQEKMGIALQRLAAEDPSFRVKTDEESGQTIISGMGELHLEIIVDRMKREFGVEAN CCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC VGKPQVAYRETIRKTVEEAEGKFVRQSGGKGQYGHVVLKIEPNEAGKGIEFVDAIKGGVV CCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCC PREFIPAVEKGINEAVTQGVLAGYPVVDVKVTLHFGSYHDVDSNELAFKMAAIFGFKEGC CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH KKAGPVILEPMMAVEVETPEDYAGTVMGDLSSRRGMVQGMDDMVGGGKAIKAEVPLSEMF HHCCCEEECCEEEEEECCCCCCCCHHHHHHHHHCCHHHCHHHHCCCCCEEEECCCHHHHH GYSTALRSATQGRATYTMEFKHYSEAPRNVSEAIMAARAK HHHHHHHHHCCCCEEEEEEEHHHCCCCCCHHHHHHHHCCC >Mature Secondary Structure ARKTPIERYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERG CCCCHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTCFWKGMDMSYPEHRFNIIDTPGHVDFTIEVERSMRVLDGACMVYCAVGGVQ EEEEECHHHHEECCCCCCCCCCCCEEECCCCCEEEEEEECHHHHHHHHHHEEEEECCCCC PQSETVWRQANKYKVPRLAFVNKMDRTGANFFKVYDQMRLRLKANPVPVVIPIGAEEGFK CCHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCEEEEECCCCCCHH GVVDLLKMKAIIWDEASQGMKFNYEEIPADLAESAKEWREKMVEAAAEASEELMNKYLEE HHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GDLSEEEIKLGLRTRTIATEIQPMLCGTAFKNKGVQRMLDAVIDYLPSPVDIPPVAGTDE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCC DEAETTRKADDNEKFSALAFKLMTDPFVGQLTFVRVYSGVLSKGDSVYNPVKGKKERIGR HHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH IVQMHANERLEVEEIRAGDIAACVGLKDVTTGETLCDPEAIVTLERMVFPEPVIAQAVEP HHHHHCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCC KTKTDQEKMGIALQRLAAEDPSFRVKTDEESGQTIISGMGELHLEIIVDRMKREFGVEAN CCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC VGKPQVAYRETIRKTVEEAEGKFVRQSGGKGQYGHVVLKIEPNEAGKGIEFVDAIKGGVV CCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCC PREFIPAVEKGINEAVTQGVLAGYPVVDVKVTLHFGSYHDVDSNELAFKMAAIFGFKEGC CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH KKAGPVILEPMMAVEVETPEDYAGTVMGDLSSRRGMVQGMDDMVGGGKAIKAEVPLSEMF HHCCCEEECCEEEEEECCCCCCCCHHHHHHHHHCCHHHCHHHHCCCCCEEEECCCHHHHH GYSTALRSATQGRATYTMEFKHYSEAPRNVSEAIMAARAK HHHHHHHHHCCCCEEEEEEEHHHCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA