Click here to switch to the map view.

The map label for this gene is 120609017

Identifier: 120609017

GI number: 120609017

Start: 347096

End: 347611

Strand: Direct

Name: 120609017

Synonym: Aave_0314

Alternate gene names: NA

Gene position: 347096-347611 (Clockwise)

Preceding gene: 120609016

Following gene: 120609024

Centisome position: 6.48

GC content: 71.32

Gene sequence:

>516_bases
ATGGCCGCACTGCAATGGTCGGAGGGTCTCGCACTGGACCTGCCCCTGATGGATGAAACGCACGAGGAGTTCGTCGCCCT
GCTGGCCGCCGTCGAACAGGCGGGCGACGAGGCGCTGCTGCCCGCATGGCGCGCGCTCGTGGCCCACACCACGGAGCACT
TCGCACGCGAAGACGCCTGGATGGCCGCCACCCGCTTCGCCTCCGGCAACTGCCACAGCCTGCAGCACAAGGTGGTGCTG
CAGGTCATGGGCGAGGGCACGGCCCGCGCGGAGGCGGGCGAGTCTGCCGTGCTGCGCCACATGGCTGGCGAGCTGGCGGT
GTGGTTCCCCCAGCACACCCAGACCATGGATGCTGCGCTGGCCCTGCACCTGCGCCGCGTGGGCTACGATCCCGCCAGCG
GCACTGTGCATGCGCCCGGCGCGCTGCCGGCCGAGCCCATTCATGGTTGCGGCGGCGCGTGTTCCAGCGATTCGACGGGG
CCGGAAACCGAAAGTCGGGCCGCCACCGCCGCCTGA

Upstream 100 bases:

>100_bases
TGCCCGCACCAGGGCCCGAAGGCTGACCTGCATCAAAGCTCCCGGCCGGGGCTGCGCCTAAGCTGCATCGCTCATCGCAA
GCCAAGGATTGGAGAGATGC

Downstream 100 bases:

>100_bases
GCCGGTGTCGCCGCCTTCGCCCGGTGACTCGATTCTCGGCTTCGATGCCTCCGCATCACCGGGCGCCAGCGCAGCCTCCC
TTGCACGCATGGCCCATGCT

Product: hemerythrin-like metal-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MAALQWSEGLALDLPLMDETHEEFVALLAAVEQAGDEALLPAWRALVAHTTEHFAREDAWMAATRFASGNCHSLQHKVVL
QVMGEGTARAEAGESAVLRHMAGELAVWFPQHTQTMDAALALHLRRVGYDPASGTVHAPGALPAEPIHGCGGACSSDSTG
PETESRAATAA

Sequences:

>Translated_171_residues
MAALQWSEGLALDLPLMDETHEEFVALLAAVEQAGDEALLPAWRALVAHTTEHFAREDAWMAATRFASGNCHSLQHKVVL
QVMGEGTARAEAGESAVLRHMAGELAVWFPQHTQTMDAALALHLRRVGYDPASGTVHAPGALPAEPIHGCGGACSSDSTG
PETESRAATAA
>Mature_170_residues
AALQWSEGLALDLPLMDETHEEFVALLAAVEQAGDEALLPAWRALVAHTTEHFAREDAWMAATRFASGNCHSLQHKVVLQ
VMGEGTARAEAGESAVLRHMAGELAVWFPQHTQTMDAALALHLRRVGYDPASGTVHAPGALPAEPIHGCGGACSSDSTGP
ETESRAATAA

Specific function: Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms [H]

COG id: COG2703

COG function: function code P; Hemerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hemerythrin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012827
- InterPro:   IPR012312
- InterPro:   IPR016131 [H]

Pfam domain/function: PF01814 Hemerythrin [H]

EC number: NA

Molecular weight: Translated: 18015; Mature: 17884

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALQWSEGLALDLPLMDETHEEFVALLAAVEQAGDEALLPAWRALVAHTTEHFAREDAW
CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
MAATRFASGNCHSLQHKVVLQVMGEGTARAEAGESAVLRHMAGELAVWFPQHTQTMDAAL
HHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHCCEEEECCCCHHHHHHHH
ALHLRRVGYDPASGTVHAPGALPAEPIHGCGGACSSDSTGPETESRAATAA
HHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure 
AALQWSEGLALDLPLMDETHEEFVALLAAVEQAGDEALLPAWRALVAHTTEHFAREDAW
CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
MAATRFASGNCHSLQHKVVLQVMGEGTARAEAGESAVLRHMAGELAVWFPQHTQTMDAAL
HHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHCCEEEECCCCHHHHHHHH
ALHLRRVGYDPASGTVHAPGALPAEPIHGCGGACSSDSTGPETESRAATAA
HHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]