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The map label for this gene is yjbJ [H]

Identifier: 120609015

GI number: 120609015

Start: 346021

End: 346239

Strand: Direct

Name: yjbJ [H]

Synonym: Aave_0312

Alternate gene names: 120609015

Gene position: 346021-346239 (Clockwise)

Preceding gene: 120609014

Following gene: 120609016

Centisome position: 6.46

GC content: 61.64

Gene sequence:

>219_bases
ATGAACGAAGACACCATCAAGGGCAACTGGAAGCAATTCACCGGAAAGATCAAGGAGCAGTGGGGCAAGCTGACCGACGA
CGACCTCGATGTGGTCGCCGGCAAGCGCGACCAGTTCCTGGGCAAGCTGCAGGAGCGCCAGGGCCTCGCACGCGATGCCG
CCGAGGAGGAACTCAAGGCCTGGCAGGAGCGCCACCCCGATTTCCGTTTCGACAAGTGA

Upstream 100 bases:

>100_bases
GCCAGGCCGACTTTTACAGTGCCTCCATCGCATCCCGCAAGGGTTCCACCCCGCACTGGAGTGGATGGCGGACGCGACGC
ACCGAAGAGAGGACACGTCC

Downstream 100 bases:

>100_bases
TCCGTTCGGACTCCTGCTCTCTCGCAGCATTTTCTGAAAACCAACCCCTTCACTGACTTGAGGAGAAAACAATGAAGCAC
GCACGCAATCTGCTCGCCCT

Product: CsbD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MNEDTIKGNWKQFTGKIKEQWGKLTDDDLDVVAGKRDQFLGKLQERQGLARDAAEEELKAWQERHPDFRFDK

Sequences:

>Translated_72_residues
MNEDTIKGNWKQFTGKIKEQWGKLTDDDLDVVAGKRDQFLGKLQERQGLARDAAEEELKAWQERHPDFRFDK
>Mature_72_residues
MNEDTIKGNWKQFTGKIKEQWGKLTDDDLDVVAGKRDQFLGKLQERQGLARDAAEEELKAWQERHPDFRFDK

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family [H]

Homologues:

Organism=Escherichia coli, GI1790479, Length=65, Percent_Identity=60, Blast_Score=86, Evalue=5e-19,

Paralogues:

None

Copy number: 12620 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 440 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008462 [H]

Pfam domain/function: PF05532 CsbD [H]

EC number: NA

Molecular weight: Translated: 8507; Mature: 8507

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEDTIKGNWKQFTGKIKEQWGKLTDDDLDVVAGKRDQFLGKLQERQGLARDAAEEELKA
CCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH
WQERHPDFRFDK
HHHHCCCCCCCC
>Mature Secondary Structure
MNEDTIKGNWKQFTGKIKEQWGKLTDDDLDVVAGKRDQFLGKLQERQGLARDAAEEELKA
CCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH
WQERHPDFRFDK
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]