| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609011
Identifier: 120609011
GI number: 120609011
Start: 341570
End: 342550
Strand: Direct
Name: 120609011
Synonym: Aave_0308
Alternate gene names: NA
Gene position: 341570-342550 (Clockwise)
Preceding gene: 120609010
Following gene: 120609012
Centisome position: 6.38
GC content: 72.58
Gene sequence:
>981_bases ATGGAAAACAAGTCCCACGCCCTGGCCGCGGGCATTTTCGTGGTCGTGGTGGCGGCGCTGCTGGCGGCGCTCGGCCTGTG GCTCACCCGCGACCGGGCCAGCTACCAGCTCTACGAGCTCTCCACGCGCGAGAGCGTCGGCGGTCTGCAGCCCCAGGCCG CCGTGCGCTACAAGGGCGTGGCCGTGGGCAAGGTCACGCGCATCGGCTTCGATCCCGACGTGCCGGGCAACGTGCTCATC CGCATCGCCGTCAACGACCAGGCGCCCGTCACCCCGGCCACCTTCGCCGTGCTGGGCTACCAGGGCGTCACGGGCCTGGC CCACGTGCTGCTCGATGACGGCAACGGTCCGCAGCCGGCGCTGCCCCGCGGAGCGAGCGGCCTGCCGCGGCTGCCCCTCA AGAGCTCCCCCTTCAGCCAGCTGGCGGAGCAGGGGCCGGCCATCCTCGCGCAGGTGCAGCAGGCCACCGATCGCATCAAC GACCTGCTGGGCGACGAGAACCAGAAACGCTTTTCCCTGGCGCTGGAGAACCTCGGCCAGGCCGCCGGCAGCGCCAACGC GCTCATGAAGCGGCTCGATGCCACCGTGGAGCAGCGGCTCGACCCCGCACTGGCCTCGGTGCCGGCGGTGGCCAGTGATG CCCGCGAGACACTGAAAGCCCTGCGGCAGGCCGGCACCAACGCCGGTGATGCCGCCAACGAGGTCAAGGCCGCGGTGCGC AAGCTCAGCGCCGAAAACGGACCGCTCGACCAGATCGCCGACAGCTCGCAATCGCTCTCGCTCGCCGCGGACCGTTTCGG CCGCGTGACGCTGCCGCGCCTGAACCACGCCGCCGACGAAACCTCGCGCGCTGCGCGCCGGCTGGGCCGGGCGGCGAGCG GCTTCAGCGACAACCCGCAATCGCTCATCTACGGGCCCGGCCGCGCCGCGGGCGGCCCCGGCGAGCCCGGATTCGAGGCG CCTGCCGTCGCGGCCCCGTAA
Upstream 100 bases:
>100_bases ATCCGTTCATTCAACACTTTTTCCTCGGGGAGCGCGGCCGCCGCGCGATGGCGCCCGCGCCGTCGGCGCCGCCTGCCGCC GCCCCGGGACAGGAGGCCTG
Downstream 100 bases:
>100_bases GGCGCAGGCCGCCCGCCCGGGCACCTGCATGCCCCCCGCAGCACCTTCCACCGCATCCATGGACATGACGAGGAACGACA TGGCACACCACGCAGTCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Related Protein; Mammalian Cell Entry Related Domain-Containing Protein; ABC-Type Transporter Periplasmic Component; Mammalian Cell Entry ; ABC Membrane Transporter Periplasmic Protein; Mce Related Family; Mce Family Protein; ABC-Type Transport System Periplasmic Component LinM; Signal Peptide Protein; ABC-Type Transport System Periplasmic Component; ABC-Type Transport System Protein; Periplasmic Protein; Exported Protein
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MENKSHALAAGIFVVVVAALLAALGLWLTRDRASYQLYELSTRESVGGLQPQAAVRYKGVAVGKVTRIGFDPDVPGNVLI RIAVNDQAPVTPATFAVLGYQGVTGLAHVLLDDGNGPQPALPRGASGLPRLPLKSSPFSQLAEQGPAILAQVQQATDRIN DLLGDENQKRFSLALENLGQAAGSANALMKRLDATVEQRLDPALASVPAVASDARETLKALRQAGTNAGDAANEVKAAVR KLSAENGPLDQIADSSQSLSLAADRFGRVTLPRLNHAADETSRAARRLGRAASGFSDNPQSLIYGPGRAAGGPGEPGFEA PAVAAP
Sequences:
>Translated_326_residues MENKSHALAAGIFVVVVAALLAALGLWLTRDRASYQLYELSTRESVGGLQPQAAVRYKGVAVGKVTRIGFDPDVPGNVLI RIAVNDQAPVTPATFAVLGYQGVTGLAHVLLDDGNGPQPALPRGASGLPRLPLKSSPFSQLAEQGPAILAQVQQATDRIN DLLGDENQKRFSLALENLGQAAGSANALMKRLDATVEQRLDPALASVPAVASDARETLKALRQAGTNAGDAANEVKAAVR KLSAENGPLDQIADSSQSLSLAADRFGRVTLPRLNHAADETSRAARRLGRAASGFSDNPQSLIYGPGRAAGGPGEPGFEA PAVAAP >Mature_326_residues MENKSHALAAGIFVVVVAALLAALGLWLTRDRASYQLYELSTRESVGGLQPQAAVRYKGVAVGKVTRIGFDPDVPGNVLI RIAVNDQAPVTPATFAVLGYQGVTGLAHVLLDDGNGPQPALPRGASGLPRLPLKSSPFSQLAEQGPAILAQVQQATDRIN DLLGDENQKRFSLALENLGQAAGSANALMKRLDATVEQRLDPALASVPAVASDARETLKALRQAGTNAGDAANEVKAAVR KLSAENGPLDQIADSSQSLSLAADRFGRVTLPRLNHAADETSRAARRLGRAASGFSDNPQSLIYGPGRAAGGPGEPGFEA PAVAAP
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33782; Mature: 33782
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKSHALAAGIFVVVVAALLAALGLWLTRDRASYQLYELSTRESVGGLQPQAAVRYKGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCHHHHHCCCE AVGKVTRIGFDPDVPGNVLIRIAVNDQAPVTPATFAVLGYQGVTGLAHVLLDDGNGPQPA EECCEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCC LPRGASGLPRLPLKSSPFSQLAEQGPAILAQVQQATDRINDLLGDENQKRFSLALENLGQ CCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AAGSANALMKRLDATVEQRLDPALASVPAVASDARETLKALRQAGTNAGDAANEVKAAVR HCCHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH KLSAENGPLDQIADSSQSLSLAADRFGRVTLPRLNHAADETSRAARRLGRAASGFSDNPQ HHHCCCCCHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC SLIYGPGRAAGGPGEPGFEAPAVAAP CEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MENKSHALAAGIFVVVVAALLAALGLWLTRDRASYQLYELSTRESVGGLQPQAAVRYKGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCHHHHHCCCE AVGKVTRIGFDPDVPGNVLIRIAVNDQAPVTPATFAVLGYQGVTGLAHVLLDDGNGPQPA EECCEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCC LPRGASGLPRLPLKSSPFSQLAEQGPAILAQVQQATDRINDLLGDENQKRFSLALENLGQ CCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AAGSANALMKRLDATVEQRLDPALASVPAVASDARETLKALRQAGTNAGDAANEVKAAVR HCCHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH KLSAENGPLDQIADSSQSLSLAADRFGRVTLPRLNHAADETSRAARRLGRAASGFSDNPQ HHHCCCCCHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC SLIYGPGRAAGGPGEPGFEAPAVAAP CEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA