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The map label for this gene is epsD [H]

Identifier: 120608971

GI number: 120608971

Start: 297649

End: 298812

Strand: Direct

Name: epsD [H]

Synonym: Aave_0268

Alternate gene names: 120608971

Gene position: 297649-298812 (Clockwise)

Preceding gene: 120608970

Following gene: 120608972

Centisome position: 5.56

GC content: 75.26

Gene sequence:

>1164_bases
ATGAGCGCGCGCACGTCCCACGCCGCCGCGGCCGCGGGCACGCCGCCCGCGCGGCGGCCGCGCGTGCTGCATTTCGTGAC
CGGCGGCTTCTCCGGCGCCACGCAGGTGGCCGTCGATCTGGTGCGCGCGCATGCGGGCTCCGGCCGCTTCGACGCCCTGC
TGGCGCTGCGCTCCAAGCGCCGCACCACCACGCCCGAACGCGTGGCGGCGCTGCGGGCCGAGAACTTGGCGGTGGAGTTG
GTGCCCGGCTGGGCGCATGCGGCCACCGTGTGGGCGCTGGCGGCCCTGTGCCGGCGCTGGCGGCCGGACATCCTGGTCGC
GCACGGCTTCAGCGAGCATCTCTGGGGCCGCTATGCCGGCCTGCTGGCGGGCGTGCCCCGGCTGGTGCACGTGGAGCACA
ACTCCCGCGAGCGCTACACCGCCTGGCGCCTGGCCCAGGCGCGCTGGCTGGCGCGGCGCACGGCCGCCATCGTCGGCGTT
TCCGAAGGCGTGCGAACCACCCTGCAGGAGCGCGGATTTCCGCCGGACCGCATCCACGCCATTCCCAACGGCGTGCGGCT
GGAGCCTTTCGCCCAGGCCGCCGCCCACCCCTTCGCCGCGCGCGAGCCCGGCATCGTGATGGCCGCCCGCTTCGCGCGGC
AGAAGGACCACGCCACGCTGCTGCGCGCCGTGGCGCTGTTGCGCGATCGCGGCCTCACGCCGCCCGTGCGGCTGGCCGGC
GGCGGCAAGCCCGGCGCACGGCAGGCGGCCGAGCGGCTGGCGCGTGAATTGAACCTGCTGCCCCAGGTGCAGTTCATCGG
CCACTGCGCCGACGTGCCGGGGCTGCTGATGGGCCAGCAGATCTGCGTGCTCTCCACGCATTACGAAGGTATGCCGCTGT
CGCTCATCGAAGGCATGGCCGCCGGCTGCGCCGTGGTGGGCAGTCGCGTGGTGGGTGTGCAGGAGGTGATCGCGCCCGGG
CGCACGGGCCTGCTGGCCGAGCCGGGCGACTTCGCCTCGCTCGCCGATGCACTGGAGCGGCTCCTGGCCGATGCCGATGC
CGCCGCCCGCATGGCCGCCGCCGCCCGGGAGGACGCCGTGGCGCGTTACGGCCTGCCCACCATGACGGCGCGGTACGAAG
CCCTGCTGGAGGGCCTGCTGCGCGAATCGCCCGCTGCGCCATGA

Upstream 100 bases:

>100_bases
AGCGGCATCATGTTCTACATCTTCATGAACATGATCACATGGGCGGCCTTGCTGGGCATGAGGATGCCGGCGGCGGGCGC
CAGGGTATGAAGTCCGTGCC

Downstream 100 bases:

>100_bases
CGCCCTCTTCCCCCCCGATGGTGGCAGGCCCTGCCGCCGCGCCCTGGCTCAGCGTGCTCGTGCCCGTCTACAACGTGCGC
GACTACCTCGCCGAGTGCGT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MSARTSHAAAAAGTPPARRPRVLHFVTGGFSGATQVAVDLVRAHAGSGRFDALLALRSKRRTTTPERVAALRAENLAVEL
VPGWAHAATVWALAALCRRWRPDILVAHGFSEHLWGRYAGLLAGVPRLVHVEHNSRERYTAWRLAQARWLARRTAAIVGV
SEGVRTTLQERGFPPDRIHAIPNGVRLEPFAQAAAHPFAAREPGIVMAARFARQKDHATLLRAVALLRDRGLTPPVRLAG
GGKPGARQAAERLARELNLLPQVQFIGHCADVPGLLMGQQICVLSTHYEGMPLSLIEGMAAGCAVVGSRVVGVQEVIAPG
RTGLLAEPGDFASLADALERLLADADAAARMAAAAREDAVARYGLPTMTARYEALLEGLLRESPAAP

Sequences:

>Translated_387_residues
MSARTSHAAAAAGTPPARRPRVLHFVTGGFSGATQVAVDLVRAHAGSGRFDALLALRSKRRTTTPERVAALRAENLAVEL
VPGWAHAATVWALAALCRRWRPDILVAHGFSEHLWGRYAGLLAGVPRLVHVEHNSRERYTAWRLAQARWLARRTAAIVGV
SEGVRTTLQERGFPPDRIHAIPNGVRLEPFAQAAAHPFAAREPGIVMAARFARQKDHATLLRAVALLRDRGLTPPVRLAG
GGKPGARQAAERLARELNLLPQVQFIGHCADVPGLLMGQQICVLSTHYEGMPLSLIEGMAAGCAVVGSRVVGVQEVIAPG
RTGLLAEPGDFASLADALERLLADADAAARMAAAAREDAVARYGLPTMTARYEALLEGLLRESPAAP
>Mature_386_residues
SARTSHAAAAAGTPPARRPRVLHFVTGGFSGATQVAVDLVRAHAGSGRFDALLALRSKRRTTTPERVAALRAENLAVELV
PGWAHAATVWALAALCRRWRPDILVAHGFSEHLWGRYAGLLAGVPRLVHVEHNSRERYTAWRLAQARWLARRTAAIVGVS
EGVRTTLQERGFPPDRIHAIPNGVRLEPFAQAAAHPFAAREPGIVMAARFARQKDHATLLRAVALLRDRGLTPPVRLAGG
GKPGARQAAERLARELNLLPQVQFIGHCADVPGLLMGQQICVLSTHYEGMPLSLIEGMAAGCAVVGSRVVGVQEVIAPGR
TGLLAEPGDFASLADALERLLADADAAARMAAAAREDAVARYGLPTMTARYEALLEGLLRESPAAP

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 41319; Mature: 41188

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARTSHAAAAAGTPPARRPRVLHFVTGGFSGATQVAVDLVRAHAGSGRFDALLALRSKR
CCCCCCCCHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHC
RTTTPERVAALRAENLAVELVPGWAHAATVWALAALCRRWRPDILVAHGFSEHLWGRYAG
CCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHH
LLAGVPRLVHVEHNSRERYTAWRLAQARWLARRTAAIVGVSEGVRTTLQERGFPPDRIHA
HHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHC
IPNGVRLEPFAQAAAHPFAAREPGIVMAARFARQKDHATLLRAVALLRDRGLTPPVRLAG
CCCCCEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
GGKPGARQAAERLARELNLLPQVQFIGHCADVPGLLMGQQICVLSTHYEGMPLSLIEGMA
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCEEEEEECCCCCCCHHHHHHHH
AGCAVVGSRVVGVQEVIAPGRTGLLAEPGDFASLADALERLLADADAAARMAAAAREDAV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
ARYGLPTMTARYEALLEGLLRESPAAP
HHCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SARTSHAAAAAGTPPARRPRVLHFVTGGFSGATQVAVDLVRAHAGSGRFDALLALRSKR
CCCCCCCHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHC
RTTTPERVAALRAENLAVELVPGWAHAATVWALAALCRRWRPDILVAHGFSEHLWGRYAG
CCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHH
LLAGVPRLVHVEHNSRERYTAWRLAQARWLARRTAAIVGVSEGVRTTLQERGFPPDRIHA
HHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHC
IPNGVRLEPFAQAAAHPFAAREPGIVMAARFARQKDHATLLRAVALLRDRGLTPPVRLAG
CCCCCEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
GGKPGARQAAERLARELNLLPQVQFIGHCADVPGLLMGQQICVLSTHYEGMPLSLIEGMA
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCEEEEEECCCCCCCHHHHHHHH
AGCAVVGSRVVGVQEVIAPGRTGLLAEPGDFASLADALERLLADADAAARMAAAAREDAV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
ARYGLPTMTARYEALLEGLLRESPAAP
HHCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]