| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is pssA [H]
Identifier: 120608831
GI number: 120608831
Start: 135315
End: 135938
Strand: Direct
Name: pssA [H]
Synonym: Aave_0123
Alternate gene names: 120608831
Gene position: 135315-135938 (Clockwise)
Preceding gene: 120608830
Following gene: 120608832
Centisome position: 2.53
GC content: 66.99
Gene sequence:
>624_bases ATGACCCCGCAAGCCCCCAAGCGTTTTTCGATGATCCGCGAGTTCCACCTGGCCGACTGGTTCACGCTGGGCAACGCCGT GTGCGGCGTGGGGGCGCTGTTCTCCTCCATGACCTTCATGGAGACGGGCGACGTGCGCCACGTGTACTTCGCCGCCGCGC TGGTGCTCGCGGCGCTGGTCTTCGACGTGCTCGACGGCCGCGTCGCGCGCTGGCGGCAGAAATCCTCCGCCATGGGCCGC GAGCTGGATTCGCTGGCCGACGTGATTTCGTTCGGCGTGGCCCCGGCCATCATCGCCTACGCCTGCGGCATGCAGGGCCT CTACGACCGCATCGTGCTGGCCTTCTTCGTGGCCTGCGGCGTCTCGCGCCTCGCGCGCTACAACGTCACGGCGGAAACGC TCTCCGAAGGCTCGGGCAAGGTGAAGTACTTCGAGGGCACGCCGATCCCCACGTCCATCGTGCTCGTGGGACTCATGGCA CTGGCCGCATCGCTCGGCGCCGTGCGCGAGAACCTGTGGTTCGGCAAGCTGCTGGTGGGGGGCTTCACGCTGCACCCCTT CGTGCTGCTGTTCGCGGTGTCCGGCTCGCTCATGATCAGCCGGATCCGCATACCGAAGTTTTGA
Upstream 100 bases:
>100_bases GGACATACCTGACGAGGCCCGCGCCGGCCCCGTCCCATAATCGGCCAACGGCCCCGCGCCGCAGCATCCGCAGGAAACTG CCAGGAAGGAAAGACCGCCC
Downstream 100 bases:
>100_bases CCCCCCCTGAGTCGCCTTCGGCGCCTTCCCCCCCCAAGGGGGACGACGCCAGTGGCCCGGCAAAGCCGGTTCCACGGCGT CTGCTGGCGTGGCCTGCTCC
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTPQAPKRFSMIREFHLADWFTLGNAVCGVGALFSSMTFMETGDVRHVYFAAALVLAALVFDVLDGRVARWRQKSSAMGR ELDSLADVISFGVAPAIIAYACGMQGLYDRIVLAFFVACGVSRLARYNVTAETLSEGSGKVKYFEGTPIPTSIVLVGLMA LAASLGAVRENLWFGKLLVGGFTLHPFVLLFAVSGSLMISRIRIPKF
Sequences:
>Translated_207_residues MTPQAPKRFSMIREFHLADWFTLGNAVCGVGALFSSMTFMETGDVRHVYFAAALVLAALVFDVLDGRVARWRQKSSAMGR ELDSLADVISFGVAPAIIAYACGMQGLYDRIVLAFFVACGVSRLARYNVTAETLSEGSGKVKYFEGTPIPTSIVLVGLMA LAASLGAVRENLWFGKLLVGGFTLHPFVLLFAVSGSLMISRIRIPKF >Mature_206_residues TPQAPKRFSMIREFHLADWFTLGNAVCGVGALFSSMTFMETGDVRHVYFAAALVLAALVFDVLDGRVARWRQKSSAMGRE LDSLADVISFGVAPAIIAYACGMQGLYDRIVLAFFVACGVSRLARYNVTAETLSEGSGKVKYFEGTPIPTSIVLVGLMAL AASLGAVRENLWFGKLLVGGFTLHPFVLLFAVSGSLMISRIRIPKF
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=204, Percent_Identity=46.5686274509804, Blast_Score=177, Evalue=1e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 22440; Mature: 22309
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPQAPKRFSMIREFHLADWFTLGNAVCGVGALFSSMTFMETGDVRHVYFAAALVLAALV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FDVLDGRVARWRQKSSAMGRELDSLADVISFGVAPAIIAYACGMQGLYDRIVLAFFVACG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH VSRLARYNVTAETLSEGSGKVKYFEGTPIPTSIVLVGLMALAASLGAVRENLWFGKLLVG HHHHHHHCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GFTLHPFVLLFAVSGSLMISRIRIPKF CHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TPQAPKRFSMIREFHLADWFTLGNAVCGVGALFSSMTFMETGDVRHVYFAAALVLAALV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FDVLDGRVARWRQKSSAMGRELDSLADVISFGVAPAIIAYACGMQGLYDRIVLAFFVACG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH VSRLARYNVTAETLSEGSGKVKYFEGTPIPTSIVLVGLMALAASLGAVRENLWFGKLLVG HHHHHHHCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GFTLHPFVLLFAVSGSLMISRIRIPKF CHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8002567; 9384377 [H]