Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
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Accession | NC_008750 |
Length | 4,708,380 |
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The map label for this gene is 120597571
Identifier: 120597571
GI number: 120597571
Start: 823991
End: 824392
Strand: Direct
Name: 120597571
Synonym: Sputw3181_0740
Alternate gene names: NA
Gene position: 823991-824392 (Clockwise)
Preceding gene: 120597563
Following gene: 120597572
Centisome position: 17.5
GC content: 48.01
Gene sequence:
>402_bases ATGAACGACGACATTACTATCTTACTGCCCTCGCTTATTCATCGAATTGGGCGCGAGGCGGTTAAACAAGCTCAAGCGAT TGCAACTCAGTATGATTGCGAGCTTAAGCGTGTGCGGCGTTCGAGGAATTGGTGCATTGTTGGCGCAGCGGTCAAGATCC AATCCTGCACCGCCCATTTACAAGCCGAGCAGCGACTGATGGCTGATGGTGCATTTCGTTATCTTATTCAAAAGCTTGAG TCAGCTTTGCTACAGTATGCAGACAAACTTGAACCATTAGACGCTAAGCTGATTCGGCTTATCACAGACAACCCTGCGAT TACCTTAGGTGAGTTGATGCAATTGACTCAATGCACTGTCACAGAGGCCAGATTGGCACGTTTTCAAGCTGACTCTTGGT AG
Upstream 100 bases:
>100_bases TCGCGCTAGGTATTTTATGGCGCTTGAATGTTAAGTCGAGCCGACCTTGCCCAATTGCCATGAAAGTATTCGATAAACCA ACAGTTATTCATCACGCGTT
Downstream 100 bases:
>100_bases TTTGTCCGCTGAGTTTTTTGCTTTGAAGGTTTATTTATCCGTCATTCCGCAGCTAATTCCAGAATTTAAATAGTGTGATC TGGCGATCAGCTTTTCATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MNDDITILLPSLIHRIGREAVKQAQAIATQYDCELKRVRRSRNWCIVGAAVKIQSCTAHLQAEQRLMADGAFRYLIQKLE SALLQYADKLEPLDAKLIRLITDNPAITLGELMQLTQCTVTEARLARFQADSW
Sequences:
>Translated_133_residues MNDDITILLPSLIHRIGREAVKQAQAIATQYDCELKRVRRSRNWCIVGAAVKIQSCTAHLQAEQRLMADGAFRYLIQKLE SALLQYADKLEPLDAKLIRLITDNPAITLGELMQLTQCTVTEARLARFQADSW >Mature_133_residues MNDDITILLPSLIHRIGREAVKQAQAIATQYDCELKRVRRSRNWCIVGAAVKIQSCTAHLQAEQRLMADGAFRYLIQKLE SALLQYADKLEPLDAKLIRLITDNPAITLGELMQLTQCTVTEARLARFQADSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15068; Mature: 15068
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDDITILLPSLIHRIGREAVKQAQAIATQYDCELKRVRRSRNWCIVGAAVKIQSCTAHL CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHH QAEQRLMADGAFRYLIQKLESALLQYADKLEPLDAKLIRLITDNPAITLGELMQLTQCTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHH TEARLARFQADSW HHHHHHHHCCCCC >Mature Secondary Structure MNDDITILLPSLIHRIGREAVKQAQAIATQYDCELKRVRRSRNWCIVGAAVKIQSCTAHL CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHH QAEQRLMADGAFRYLIQKLESALLQYADKLEPLDAKLIRLITDNPAITLGELMQLTQCTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHH TEARLARFQADSW HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA