Click here to switch to the map view.

The map label for this gene is ywnB [H]

Identifier: 120597551

GI number: 120597551

Start: 799981

End: 800613

Strand: Direct

Name: ywnB [H]

Synonym: Sputw3181_0720

Alternate gene names: 120597551

Gene position: 799981-800613 (Clockwise)

Preceding gene: 120597549

Following gene: 120597553

Centisome position: 16.99

GC content: 48.34

Gene sequence:

>633_bases
ATGAAAATCGCAATTTTAGGTGCAACAGGTTGGATTGGTGGTGCAATTTTAAAAGAAGCACTAAGCCGAGGGCATGAAGT
CACCGCACTGGTTCGTGATCCAAGTAAATTACCAACAACGAATGCGGCAGTGCGTACCGTGGATTTAAATCAGCCACTTG
TTGCTGATAGCTTTACCAATCAGGATGTCGTGATCGCCGCGATCGGTGGCCGTGCCGCACAAAACCACGAAATAGTGGCG
GGAACAGCCACTCATTTATTAGCAATATTGCCTAAGGCCAAAGTGCCGCGTTTATTATGGGTGGGTGGTGCAGGGAGTTT
AGAAGTCGCACCGGGTGTAACTTTAGTATCAACCCCTGATTTTCCCGAAGCTTACAAGAGCGAAGCATTAGCGGCGGTTG
AAGCATTAAAGGTGTTTAGAGAAGCCAATACAACGGTCAATTGGACATTTGTTAGCCCTGCCGCTGAGATTTACCCAGGA
GAGAGTGAGGGCCCCTATCGTGTTGGTGGCGACAGTTTTTTTACCGATGCCAATGGTCAAAGCCGTATTTCGGTCACTGA
TTACGCCAAAGCCATGCTAGATGAGGCTGAAAAGGGCACTCACCCAAACCAACGCATCAGTGTGGCTTATTGA

Upstream 100 bases:

>100_bases
ATCCCAATCTGAAACAATCTTGCTCATTTATCGATATTTATCACGTGAAATATCCCAAGTAAACTGAATCCAATGTAAAC
CATCTGAATAAGGTAACAAA

Downstream 100 bases:

>100_bases
TATGACGATGGTGAGTTAGATACTGTGCTGGAATGTGTAACGTAATAGGGACAGTAGACATATAACTGCACCGTTATGTA
CTTAAAAATGCACAGGTAAA

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKIAILGATGWIGGAILKEALSRGHEVTALVRDPSKLPTTNAAVRTVDLNQPLVADSFTNQDVVIAAIGGRAAQNHEIVA
GTATHLLAILPKAKVPRLLWVGGAGSLEVAPGVTLVSTPDFPEAYKSEALAAVEALKVFREANTTVNWTFVSPAAEIYPG
ESEGPYRVGGDSFFTDANGQSRISVTDYAKAMLDEAEKGTHPNQRISVAY

Sequences:

>Translated_210_residues
MKIAILGATGWIGGAILKEALSRGHEVTALVRDPSKLPTTNAAVRTVDLNQPLVADSFTNQDVVIAAIGGRAAQNHEIVA
GTATHLLAILPKAKVPRLLWVGGAGSLEVAPGVTLVSTPDFPEAYKSEALAAVEALKVFREANTTVNWTFVSPAAEIYPG
ESEGPYRVGGDSFFTDANGQSRISVTDYAKAMLDEAEKGTHPNQRISVAY
>Mature_210_residues
MKIAILGATGWIGGAILKEALSRGHEVTALVRDPSKLPTTNAAVRTVDLNQPLVADSFTNQDVVIAAIGGRAAQNHEIVA
GTATHLLAILPKAKVPRLLWVGGAGSLEVAPGVTLVSTPDFPEAYKSEALAAVEALKVFREANTTVNWTFVSPAAEIYPG
ESEGPYRVGGDSFFTDANGQSRISVTDYAKAMLDEAEKGTHPNQRISVAY

Specific function: Unknown

COG id: COG2910

COG function: function code R; Putative NADH-flavin reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: NA

Molecular weight: Translated: 22123; Mature: 22123

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAILGATGWIGGAILKEALSRGHEVTALVRDPSKLPTTNAAVRTVDLNQPLVADSFTN
CEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEECCCCEEECCCCC
QDVVIAAIGGRAAQNHEIVAGTATHLLAILPKAKVPRLLWVGGAGSLEVAPGVTLVSTPD
CCEEEEEECCCCCCCCEEEEEHHHHHHHHCCCCCCCEEEEECCCCCEEECCCEEEEECCC
FPEAYKSEALAAVEALKVFREANTTVNWTFVSPAAEIYPGESEGPYRVGGDSFFTDANGQ
CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHCCCCCCCCCEEECCCCEEECCCCC
SRISVTDYAKAMLDEAEKGTHPNQRISVAY
CEEEHHHHHHHHHHHHHCCCCCCCEEEEEC
>Mature Secondary Structure
MKIAILGATGWIGGAILKEALSRGHEVTALVRDPSKLPTTNAAVRTVDLNQPLVADSFTN
CEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEECCCCEEECCCCC
QDVVIAAIGGRAAQNHEIVAGTATHLLAILPKAKVPRLLWVGGAGSLEVAPGVTLVSTPD
CCEEEEEECCCCCCCCEEEEEHHHHHHHHCCCCCCCEEEEECCCCCEEECCCEEEEECCC
FPEAYKSEALAAVEALKVFREANTTVNWTFVSPAAEIYPGESEGPYRVGGDSFFTDANGQ
CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHCCCCCCCCCEEECCCCEEECCCCC
SRISVTDYAKAMLDEAEKGTHPNQRISVAY
CEEEHHHHHHHHHHHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]