Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
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Accession | NC_008750 |
Length | 4,708,380 |
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The map label for this gene is ywrD [H]
Identifier: 120597548
GI number: 120597548
Start: 795999
End: 797711
Strand: Direct
Name: ywrD [H]
Synonym: Sputw3181_0717
Alternate gene names: 120597548
Gene position: 795999-797711 (Clockwise)
Preceding gene: 120597547
Following gene: 120597549
Centisome position: 16.91
GC content: 45.42
Gene sequence:
>1713_bases ATGCTAAAAAAAATAAATTTAATTTGTACCCTCGTTATTGTAACAACTGCGATATTGTCTTCAGGAGTGATGGCCATGGA TAGGATCACAGGTAAAGCTTTTGCAACTCGTTCTGAAGTGTATGCAACCCAAGGGATGGCGGCGACAAGCCAACCCTTAG CGACACAGGTTGCGATCGATATTCTTAAACAAGGCGGTAGTGCTGTTGATGCGGCTATTGCCGCCAATGCGATGCTAGGG TTAGTTGAACCGACAGGTTCCGGTGTAGGTGGTGATTTATTTGCAATTGTGTGGAGTGCGAAAGATAAACGTCTCTATGG TCTTAATGCCTCTGGTCGCAGCCCCAAATCCTTAACGCTAGAGAAGCTAAAATCCCTCGGATTAGATTACTTGCCTCCTT TGGGGCCGCTACCCGTATCCGTTCCCGGCGCGGTGGATGGATGGTTCGAACTGCACGATAAGTTCGGCAAGTTACCAATG GCCGATAACTTAGCGCCAGCGATTCGTTATGCCCGCGAAGGTTTCCCTGTCTCCGAGTTGATTGCCTATTACCTTGAGGG CAGCGGTAAAAAGCTTGCTCAATTCCCCGGTTTTAAAGAAACCTATATGCCAAATGGCAAAATGCCAGCCGTAGGGGAAA TCTTTAAAAATCCTGCGCTTGCTAATACTTATGAAAAAATTGCCAAGGATGGGCGCGATGCTTTTTATAAAGGGGATATC GCCAAAAGTATAGATAAGTATATGAAATCTCAAGGTGGCTATTTAAGTTATGATGATTTAGCGAGTCATACGAGTGAATG GGTTGATCCAGTTTCGGTCAATTACCGAGGTTACGATGTGTGGGAATTGCCGCCCAATGGACAGGGTATTGCTGCGCTGC AAATCCTTAAAACGATGGAGCCCTTTAATGTTGCTGCTATGGGCTTTAATAGTCCTGAATACGTACATTTATTTGTTGAG GCTAAAAAACTCGCCTTTGCCGACAGGGCGAAGTTTTATGCAGATATGGCTTTTAACAAAGTCCCCGTTACAGAGCTTAT CTCACAGAAATATAACTATGATCGCGCTAAGTTAATCAATCCTAATAAAGCCGCTAAAAGCGTTGATGCTGGAAATCCAG CATTACAACATGGTGATACGGTTTATCTAACTACCGCCGACAAAGATGGCAATATGGTGTCACTCATTCAGAGTAATTAC CGTGGTATGGGCTCTGGGATGACACCACCAGATCTTGGTTTTGTATTGCAGGATCGTGGGCAAATGTTTGATTTAACAGA GGGGCGTTTTAATTCATACGCCCCTGGTAAGAGGCCATTCCAAACCATTATTCCCGCTTTTGTGACTAAAGATGGGAAGC CTTGGCTGAGTTTTGGTGTGATGGGCGGCGCAACCCAGCCACAAATGCATGCTCAAATATTAGTCAATCTCATTGATTTT AAAATGAACTTGCAAGAAGCGGGCGATGCTCCCAGAATTTTACATTCTGGCTCCACTGAGCCAACGGGTGAAGTCATGCA TGATGGTGGTTATGTCAGTCTGGAATCAGGTTTCCCGGTAGAAACCCGCCGTGAGTTAATTAAGAAAGGCCATGTGTTGC GTGATAGTCTTGGTGATTTTGGCGGCTATCAAGCCATTGGATTTAATGCCGAAACGGGTGTATATCGTGCGGCATCTGAG AGTCGCAAGGATGGTCACGCCGCAGGCTATTAA
Upstream 100 bases:
>100_bases TAAGACATTTTTGCTTACGTTTAACTTGGGTCTACGCAGTATTGGATGATGATATTTTCAACCATCCTTGTTACTTTAAA CCTCCGGTTTCGGAGGATTT
Downstream 100 bases:
>100_bases CACTAATATAAATGCTAAGGTAAACTCAACACTGAGTGAACCTGACTTCATTGATTCGATTAAACTGATTGGCGAGACTT TAATGGTCTCGTCAATTTTT
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 570; Mature: 570
Protein sequence:
>570_residues MLKKINLICTLVIVTTAILSSGVMAMDRITGKAFATRSEVYATQGMAATSQPLATQVAIDILKQGGSAVDAAIAANAMLG LVEPTGSGVGGDLFAIVWSAKDKRLYGLNASGRSPKSLTLEKLKSLGLDYLPPLGPLPVSVPGAVDGWFELHDKFGKLPM ADNLAPAIRYAREGFPVSELIAYYLEGSGKKLAQFPGFKETYMPNGKMPAVGEIFKNPALANTYEKIAKDGRDAFYKGDI AKSIDKYMKSQGGYLSYDDLASHTSEWVDPVSVNYRGYDVWELPPNGQGIAALQILKTMEPFNVAAMGFNSPEYVHLFVE AKKLAFADRAKFYADMAFNKVPVTELISQKYNYDRAKLINPNKAAKSVDAGNPALQHGDTVYLTTADKDGNMVSLIQSNY RGMGSGMTPPDLGFVLQDRGQMFDLTEGRFNSYAPGKRPFQTIIPAFVTKDGKPWLSFGVMGGATQPQMHAQILVNLIDF KMNLQEAGDAPRILHSGSTEPTGEVMHDGGYVSLESGFPVETRRELIKKGHVLRDSLGDFGGYQAIGFNAETGVYRAASE SRKDGHAAGY
Sequences:
>Translated_570_residues MLKKINLICTLVIVTTAILSSGVMAMDRITGKAFATRSEVYATQGMAATSQPLATQVAIDILKQGGSAVDAAIAANAMLG LVEPTGSGVGGDLFAIVWSAKDKRLYGLNASGRSPKSLTLEKLKSLGLDYLPPLGPLPVSVPGAVDGWFELHDKFGKLPM ADNLAPAIRYAREGFPVSELIAYYLEGSGKKLAQFPGFKETYMPNGKMPAVGEIFKNPALANTYEKIAKDGRDAFYKGDI AKSIDKYMKSQGGYLSYDDLASHTSEWVDPVSVNYRGYDVWELPPNGQGIAALQILKTMEPFNVAAMGFNSPEYVHLFVE AKKLAFADRAKFYADMAFNKVPVTELISQKYNYDRAKLINPNKAAKSVDAGNPALQHGDTVYLTTADKDGNMVSLIQSNY RGMGSGMTPPDLGFVLQDRGQMFDLTEGRFNSYAPGKRPFQTIIPAFVTKDGKPWLSFGVMGGATQPQMHAQILVNLIDF KMNLQEAGDAPRILHSGSTEPTGEVMHDGGYVSLESGFPVETRRELIKKGHVLRDSLGDFGGYQAIGFNAETGVYRAASE SRKDGHAAGY >Mature_570_residues MLKKINLICTLVIVTTAILSSGVMAMDRITGKAFATRSEVYATQGMAATSQPLATQVAIDILKQGGSAVDAAIAANAMLG LVEPTGSGVGGDLFAIVWSAKDKRLYGLNASGRSPKSLTLEKLKSLGLDYLPPLGPLPVSVPGAVDGWFELHDKFGKLPM ADNLAPAIRYAREGFPVSELIAYYLEGSGKKLAQFPGFKETYMPNGKMPAVGEIFKNPALANTYEKIAKDGRDAFYKGDI AKSIDKYMKSQGGYLSYDDLASHTSEWVDPVSVNYRGYDVWELPPNGQGIAALQILKTMEPFNVAAMGFNSPEYVHLFVE AKKLAFADRAKFYADMAFNKVPVTELISQKYNYDRAKLINPNKAAKSVDAGNPALQHGDTVYLTTADKDGNMVSLIQSNY RGMGSGMTPPDLGFVLQDRGQMFDLTEGRFNSYAPGKRPFQTIIPAFVTKDGKPWLSFGVMGGATQPQMHAQILVNLIDF KMNLQEAGDAPRILHSGSTEPTGEVMHDGGYVSLESGFPVETRRELIKKGHVLRDSLGDFGGYQAIGFNAETGVYRAASE SRKDGHAAGY
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=562, Percent_Identity=28.1138790035587, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI73915090, Length=562, Percent_Identity=28.1138790035587, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI73915096, Length=562, Percent_Identity=28.1138790035587, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI73915094, Length=562, Percent_Identity=28.1138790035587, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI113429324, Length=554, Percent_Identity=25.9927797833935, Blast_Score=144, Evalue=3e-34, Organism=Homo sapiens, GI113429326, Length=559, Percent_Identity=26.2969588550984, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI109148539, Length=506, Percent_Identity=26.0869565217391, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI153266885, Length=558, Percent_Identity=24.910394265233, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI153266901, Length=559, Percent_Identity=24.865831842576, Blast_Score=122, Evalue=8e-28, Organism=Homo sapiens, GI153266907, Length=558, Percent_Identity=23.8351254480287, Blast_Score=110, Evalue=5e-24, Organism=Escherichia coli, GI1789856, Length=565, Percent_Identity=31.858407079646, Blast_Score=241, Evalue=1e-64, Organism=Caenorhabditis elegans, GI193208245, Length=516, Percent_Identity=26.7441860465116, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI193208247, Length=516, Percent_Identity=26.7441860465116, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17542894, Length=500, Percent_Identity=26.4, Blast_Score=138, Evalue=7e-33, Organism=Caenorhabditis elegans, GI72000294, Length=559, Percent_Identity=26.1180679785331, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI212646519, Length=559, Percent_Identity=26.1180679785331, Blast_Score=129, Evalue=5e-30, Organism=Caenorhabditis elegans, GI17506189, Length=573, Percent_Identity=25.3054101221641, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI161077878, Length=552, Percent_Identity=27.8985507246377, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI161077880, Length=552, Percent_Identity=27.8985507246377, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI24642670, Length=552, Percent_Identity=27.8985507246377, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI24642666, Length=552, Percent_Identity=27.8985507246377, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI45551474, Length=552, Percent_Identity=27.8985507246377, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI161077496, Length=554, Percent_Identity=25.9927797833935, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI18859893, Length=461, Percent_Identity=26.2472885032538, Blast_Score=132, Evalue=5e-31, Organism=Drosophila melanogaster, GI18859741, Length=474, Percent_Identity=24.2616033755274, Blast_Score=129, Evalue=5e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 61674; Mature: 61674
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKINLICTLVIVTTAILSSGVMAMDRITGKAFATRSEVYATQGMAATSQPLATQVAID CCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ILKQGGSAVDAAIAANAMLGLVEPTGSGVGGDLFAIVWSAKDKRLYGLNASGRSPKSLTL HHHCCCCHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHH EKLKSLGLDYLPPLGPLPVSVPGAVDGWFELHDKFGKLPMADNLAPAIRYAREGFPVSEL HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHH IAYYLEGSGKKLAQFPGFKETYMPNGKMPAVGEIFKNPALANTYEKIAKDGRDAFYKGDI HHHHHCCCCCHHHHCCCCCHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCHHHCCHH AKSIDKYMKSQGGYLSYDDLASHTSEWVDPVSVNYRGYDVWELPPNGQGIAALQILKTME HHHHHHHHHCCCCEECHHHHHHHHHHHCCCCEECCCCEEEEECCCCCCCHHHHHHHHHCC PFNVAAMGFNSPEYVHLFVEAKKLAFADRAKFYADMAFNKVPVTELISQKYNYDRAKLIN CCCEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHEECC PNKAAKSVDAGNPALQHGDTVYLTTADKDGNMVSLIQSNYRGMGSGMTPPDLGFVLQDRG CCHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEHEEHHCCCCCCCCCCCCCCCHHCCCCC QMFDLTEGRFNSYAPGKRPFQTIIPAFVTKDGKPWLSFGVMGGATQPQMHAQILVNLIDF CEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH KMNLQEAGDAPRILHSGSTEPTGEVMHDGGYVSLESGFPVETRRELIKKGHVLRDSLGDF HHHHHHCCCCCCEEECCCCCCCCCEEECCCEEEECCCCCHHHHHHHHHCCCHHHHHHCCC GGYQAIGFNAETGVYRAASESRKDGHAAGY CCEEEEECCCCCCCEECCHHCCCCCCCCCC >Mature Secondary Structure MLKKINLICTLVIVTTAILSSGVMAMDRITGKAFATRSEVYATQGMAATSQPLATQVAID CCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ILKQGGSAVDAAIAANAMLGLVEPTGSGVGGDLFAIVWSAKDKRLYGLNASGRSPKSLTL HHHCCCCHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHH EKLKSLGLDYLPPLGPLPVSVPGAVDGWFELHDKFGKLPMADNLAPAIRYAREGFPVSEL HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHH IAYYLEGSGKKLAQFPGFKETYMPNGKMPAVGEIFKNPALANTYEKIAKDGRDAFYKGDI HHHHHCCCCCHHHHCCCCCHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCHHHCCHH AKSIDKYMKSQGGYLSYDDLASHTSEWVDPVSVNYRGYDVWELPPNGQGIAALQILKTME HHHHHHHHHCCCCEECHHHHHHHHHHHCCCCEECCCCEEEEECCCCCCCHHHHHHHHHCC PFNVAAMGFNSPEYVHLFVEAKKLAFADRAKFYADMAFNKVPVTELISQKYNYDRAKLIN CCCEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHEECC PNKAAKSVDAGNPALQHGDTVYLTTADKDGNMVSLIQSNYRGMGSGMTPPDLGFVLQDRG CCHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEHEEHHCCCCCCCCCCCCCCCHHCCCCC QMFDLTEGRFNSYAPGKRPFQTIIPAFVTKDGKPWLSFGVMGGATQPQMHAQILVNLIDF CEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH KMNLQEAGDAPRILHSGSTEPTGEVMHDGGYVSLESGFPVETRRELIKKGHVLRDSLGDF HHHHHHCCCCCCEEECCCCCCCCCEEECCCEEEECCCCCHHHHHHHHHCCCHHHHHHCCC GGYQAIGFNAETGVYRAASESRKDGHAAGY CCEEEEECCCCCCCEECCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]