Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is mviM [H]
Identifier: 119947137
GI number: 119947137
Start: 4352820
End: 4353746
Strand: Reverse
Name: mviM [H]
Synonym: Ping_3535
Alternate gene names: 119947137
Gene position: 4353746-4352820 (Counterclockwise)
Preceding gene: 119947138
Following gene: 119947136
Centisome position: 95.49
GC content: 39.91
Gene sequence:
>927_bases ATGAAACTTGCTATTATTGGACTGGGTGATATTGCGCAAAAAGCGCATTTACCCGTAATTACTCAAATTCCAGGGCTTGA GGTGCTTCTCTGCACGCGCGATAAAAACACCTTAAAAAGACTGTCTAAGTTGTATCGTATTGATAGGTTATATTCAGATT ATAAAGACTTAATTAAAGCCGGGATCGATGCAGTAATGATTCATAGCAGCACGGTTTCCCATCTGCAAATTGCGACCTTT TTTTTACAGCAGGGTATTCCAACCTTTGTTGATAAACCTCTGGCCGATAATGCCTTTGATTGTGAAAGACTTTATGAGTT GGCTGCAAAGCATCGACAACCTTTATATCTGGGCTTTAATCGTCGTTTTATTCCTTTGTATAATCAGTATCTGCCGAATA TTCAAAATACCAAAGAGCATTCATCTTTATTATCATTACGTTGGGAAAAAAATAGATTTAATCAACCAGGTGATATTCGC ACCTTTATTTTTGACGACTTTATTCATCCACTGGACAGTATCAACCTTGATGCTAAAAATAACTTGGATGATGTCTACCT TACCTGGCAGTCTCAAGGTCAGCGGTTATCCCGTGTAGATATTCAGTGGCAACAACAGAAGACCCTATTGCATGCCTCAA TGAACCGTCTTTATGGTGCGACTAAAGAGCGCATTTCAGCGAGTTATGAAAATTGTGCTTTTGAGTTTGATTCCTTTGTT TCGGGTAAATGCTGGCAAGATAATCAAGAGTCCGTTATTGCTCTTCCTGACTGGACGCCTATGTTAACCGGCAAAGGCTT TACGGGTATGATCGATGATTGGTTAAGTGTGGTGGAAAAAGGCAAGTTAGCACCCTCGGTTGTTGAACGTAACCTTGCAA GCCATCAATTAGCCGAACTTATTTGCCAAAAGATATGGGTAGAATAG
Upstream 100 bases:
>100_bases GATCTTAGATCAATACTTTTTTTTTGCGTATTGGCTTAAGATAAATTATTTTAAATAACGAATACTTTGCTTTATATTAA AACGATCACCGGGAGATGGA
Downstream 100 bases:
>100_bases TCTACGAAACAGGTTGAACAAAGTAAATAAAAGACTCGTCATTCCCTTGCGGGTCGTCATTTTCCAGCATAATAGTTGAT CACTTCCTTAACAGGTTTGC
Product: oxidoreductase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MKLAIIGLGDIAQKAHLPVITQIPGLEVLLCTRDKNTLKRLSKLYRIDRLYSDYKDLIKAGIDAVMIHSSTVSHLQIATF FLQQGIPTFVDKPLADNAFDCERLYELAAKHRQPLYLGFNRRFIPLYNQYLPNIQNTKEHSSLLSLRWEKNRFNQPGDIR TFIFDDFIHPLDSINLDAKNNLDDVYLTWQSQGQRLSRVDIQWQQQKTLLHASMNRLYGATKERISASYENCAFEFDSFV SGKCWQDNQESVIALPDWTPMLTGKGFTGMIDDWLSVVEKGKLAPSVVERNLASHQLAELICQKIWVE
Sequences:
>Translated_308_residues MKLAIIGLGDIAQKAHLPVITQIPGLEVLLCTRDKNTLKRLSKLYRIDRLYSDYKDLIKAGIDAVMIHSSTVSHLQIATF FLQQGIPTFVDKPLADNAFDCERLYELAAKHRQPLYLGFNRRFIPLYNQYLPNIQNTKEHSSLLSLRWEKNRFNQPGDIR TFIFDDFIHPLDSINLDAKNNLDDVYLTWQSQGQRLSRVDIQWQQQKTLLHASMNRLYGATKERISASYENCAFEFDSFV SGKCWQDNQESVIALPDWTPMLTGKGFTGMIDDWLSVVEKGKLAPSVVERNLASHQLAELICQKIWVE >Mature_308_residues MKLAIIGLGDIAQKAHLPVITQIPGLEVLLCTRDKNTLKRLSKLYRIDRLYSDYKDLIKAGIDAVMIHSSTVSHLQIATF FLQQGIPTFVDKPLADNAFDCERLYELAAKHRQPLYLGFNRRFIPLYNQYLPNIQNTKEHSSLLSLRWEKNRFNQPGDIR TFIFDDFIHPLDSINLDAKNNLDDVYLTWQSQGQRLSRVDIQWQQQKTLLHASMNRLYGATKERISASYENCAFEFDSFV SGKCWQDNQESVIALPDWTPMLTGKGFTGMIDDWLSVVEKGKLAPSVVERNLASHQLAELICQKIWVE
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli mviM [H]
Homologues:
Organism=Escherichia coli, GI1787307, Length=316, Percent_Identity=29.4303797468354, Blast_Score=126, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: NA
Molecular weight: Translated: 35464; Mature: 35464
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAIIGLGDIAQKAHLPVITQIPGLEVLLCTRDKNTLKRLSKLYRIDRLYSDYKDLIKA CEEEEEECCHHHHHCCCCEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH GIDAVMIHSSTVSHLQIATFFLQQGIPTFVDKPLADNAFDCERLYELAAKHRQPLYLGFN CCCEEEEECCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECC RRFIPLYNQYLPNIQNTKEHSSLLSLRWEKNRFNQPGDIRTFIFDDFIHPLDSINLDAKN CCCCHHHHHHCCCCCCCHHHHHHHHEEEHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC NLDDVYLTWQSQGQRLSRVDIQWQQQKTLLHASMNRLYGATKERISASYENCAFEFDSFV CCCEEEEEECCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SGKCWQDNQESVIALPDWTPMLTGKGFTGMIDDWLSVVEKGKLAPSVVERNLASHQLAEL CCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ICQKIWVE HHHHHCCC >Mature Secondary Structure MKLAIIGLGDIAQKAHLPVITQIPGLEVLLCTRDKNTLKRLSKLYRIDRLYSDYKDLIKA CEEEEEECCHHHHHCCCCEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH GIDAVMIHSSTVSHLQIATFFLQQGIPTFVDKPLADNAFDCERLYELAAKHRQPLYLGFN CCCEEEEECCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECC RRFIPLYNQYLPNIQNTKEHSSLLSLRWEKNRFNQPGDIRTFIFDDFIHPLDSINLDAKN CCCCHHHHHHCCCCCCCHHHHHHHHEEEHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC NLDDVYLTWQSQGQRLSRVDIQWQQQKTLLHASMNRLYGATKERISASYENCAFEFDSFV CCCEEEEEECCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SGKCWQDNQESVIALPDWTPMLTGKGFTGMIDDWLSVVEKGKLAPSVVERNLASHQLAEL CCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ICQKIWVE HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]