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The map label for this gene is rcsF [C]

Identifier: 119946892

GI number: 119946892

Start: 4057698

End: 4058132

Strand: Direct

Name: rcsF [C]

Synonym: Ping_3286

Alternate gene names: 119946892

Gene position: 4057698-4058132 (Clockwise)

Preceding gene: 119946890

Following gene: 119946893

Centisome position: 88.99

GC content: 39.54

Gene sequence:

>435_bases
ATGTTATTATGCCATTCATCGCGAGTCCCTTCTATTGATAAAGAGCATCTTATGTTACGTTTTATTATTATCTCTTTTAC
CGTCCTTTTAACCACAGCTTGTAGTAACCTTGACTTTTCGTCTAATCTCGACAAGAAAAATTTTGATGATTATTTCAAAC
CCTCACGCGTCACTGTTTACGAAAAACCGCAATTGCAGGGGCTCGATTATCAATTTATTGCAGCAGTTGACGGCAGTAGC
TGCCAGCAAGAGGAAATAGATCGCCCTGCAGATATTAAAGAAGCACGTACTAATGCCCGCATTAAAGCCGCTGAGATGAA
CGCTAACGGTATCGTTTTTCAAAACTGCTTGATTTTTGAACAAGACGCATCCTGCATCAGCAACATTATTTGTTATGCTC
GTGCTATTAGTGTGAAACTTTCTGATGGGGAATAA

Upstream 100 bases:

>100_bases
ATTGTCGACATTTATTACCCCATCTCTATCAAGAAAAACGGCACGTTTTCCATTGGCTACTGTCATATTATTTCCTTCTC
TGTTTCAGGTTTATTAAAAA

Downstream 100 bases:

>100_bases
CATAGTGTTTGATTCAATAGCGATAATCCATTCCCCCTATAAAGAGAAGTTTGCTGTGCCTCGCCAGCCTGGGTTAGTTC
CCAGTGCCATCGCTGAGCTG

Product: putative lipoprotein

Products: NA

Alternate protein names: Exopolysaccharide Synthesis Regulator RcsF; RcsF Protein

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MLLCHSSRVPSIDKEHLMLRFIIISFTVLLTTACSNLDFSSNLDKKNFDDYFKPSRVTVYEKPQLQGLDYQFIAAVDGSS
CQQEEIDRPADIKEARTNARIKAAEMNANGIVFQNCLIFEQDASCISNIICYARAISVKLSDGE

Sequences:

>Translated_144_residues
MLLCHSSRVPSIDKEHLMLRFIIISFTVLLTTACSNLDFSSNLDKKNFDDYFKPSRVTVYEKPQLQGLDYQFIAAVDGSS
CQQEEIDRPADIKEARTNARIKAAEMNANGIVFQNCLIFEQDASCISNIICYARAISVKLSDGE
>Mature_144_residues
MLLCHSSRVPSIDKEHLMLRFIIISFTVLLTTACSNLDFSSNLDKKNFDDYFKPSRVTVYEKPQLQGLDYQFIAAVDGSS
CQQEEIDRPADIKEARTNARIKAAEMNANGIVFQNCLIFEQDASCISNIICYARAISVKLSDGE

Specific function: Stimulates Colanic Acid Capsule Synthesis. May Promote The Phosphorylation Of Rcsb. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16193; Mature: 16193

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLCHSSRVPSIDKEHLMLRFIIISFTVLLTTACSNLDFSSNLDKKNFDDYFKPSRVTVY
CEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCEEEEE
EKPQLQGLDYQFIAAVDGSSCQQEEIDRPADIKEARTNARIKAAEMNANGIVFQNCLIFE
ECCCCCCCCEEEEEEECCCCCCHHHCCCCCCHHHHHCCCEEEEEEECCCCEEEEEEEEEE
QDASCISNIICYARAISVKLSDGE
CCHHHHHHHHHHHHEEEEEECCCC
>Mature Secondary Structure
MLLCHSSRVPSIDKEHLMLRFIIISFTVLLTTACSNLDFSSNLDKKNFDDYFKPSRVTVY
CEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCEEEEE
EKPQLQGLDYQFIAAVDGSSCQQEEIDRPADIKEARTNARIKAAEMNANGIVFQNCLIFE
ECCCCCCCCEEEEEEECCCCCCHHHCCCCCCHHHHHCCCEEEEEEECCCCEEEEEEEEEE
QDASCISNIICYARAISVKLSDGE
CCHHHHHHHHHHHHEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Stimulates colanic acid capsule synthesis [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA