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The map label for this gene is yfiH [H]

Identifier: 119946870

GI number: 119946870

Start: 4029975

End: 4030718

Strand: Reverse

Name: yfiH [H]

Synonym: Ping_3264

Alternate gene names: 119946870

Gene position: 4030718-4029975 (Counterclockwise)

Preceding gene: 119946871

Following gene: 119946869

Centisome position: 88.4

GC content: 44.49

Gene sequence:

>744_bases
GTGCAGTTGCTAAAACCAAACTGGTCTGCTCCTGCACATATTCAAGCATTTTCCAGCACCCGTCTTGGTGGAGTTAGCTC
AGGCCTTTATTCTGAGCTGAATTTAGGTTTACATGTTGGCGATGATCCCCTTATTGTCGGCAAAAATCGCAGCACTTTAG
CCAATACTTTGTCCTTAACCGGGGATATTTGCTGGTTAAATCAGGTTCACAGTACTATTTTACTCGAGCTTAAAGAAAAC
ACTGCAGGTCCTCTGACCGCTGATGCGGCATGGAGTCATTGTAATAACACCCCCTGTATTATTATGACGGCAGATTGTTT
GCCGGTGCTTATTACCAATAAGCTGGGTACTTTTGTTTGTGCTATCCATGCCGGTTGGCGAGGTTTATGTGATGGTATTA
TTGAAAAATCAATTAAGATTATTTGTGCTCAGTTAGCCGTCAATGCAAATGATTTACTGGTTTGGTTGGGGCCCTGTATT
GGTAAAAGTGCTTTTCAGGTCGGTAGTGAGGTACGGGCTGCGTTTATTGCTGAAAACGGACAAGCTAGCTTAGCCTTTAG
CGCTTTTGGGGATCGTTGGTTGGCTGATTTACAGCAGTTGGCGCGTTTACGTTTAGCCCCCTTTAATGTCTTTGAAATCA
CAGCCAGTGAATACTGCACCTTTAACCGAGCCGACCTTTTTTATTCCTATCGTCGCGATGGTGTCACGGGGCGAATGGCC
ACCTTAATCTGGATTAATAAGTAG

Upstream 100 bases:

>100_bases
ATAATGGAATGGCATGCGCCACTGCCTGCAGATATGGCCGAATTAGCAGAGGCGTTACGCCAAGATATGATTCTGCACGG
TGGTTAATAAGGATTCTGAT

Downstream 100 bases:

>100_bases
ACAAAATAGTAGGGCTCTTAAAAAACCATCCTTTTCATCAAAAATTGCAGCTGTTTTATCTTTCCTCCTTGAAATTGTTC
AATTAACCACCATTCTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MQLLKPNWSAPAHIQAFSSTRLGGVSSGLYSELNLGLHVGDDPLIVGKNRSTLANTLSLTGDICWLNQVHSTILLELKEN
TAGPLTADAAWSHCNNTPCIIMTADCLPVLITNKLGTFVCAIHAGWRGLCDGIIEKSIKIICAQLAVNANDLLVWLGPCI
GKSAFQVGSEVRAAFIAENGQASLAFSAFGDRWLADLQQLARLRLAPFNVFEITASEYCTFNRADLFYSYRRDGVTGRMA
TLIWINK

Sequences:

>Translated_247_residues
MQLLKPNWSAPAHIQAFSSTRLGGVSSGLYSELNLGLHVGDDPLIVGKNRSTLANTLSLTGDICWLNQVHSTILLELKEN
TAGPLTADAAWSHCNNTPCIIMTADCLPVLITNKLGTFVCAIHAGWRGLCDGIIEKSIKIICAQLAVNANDLLVWLGPCI
GKSAFQVGSEVRAAFIAENGQASLAFSAFGDRWLADLQQLARLRLAPFNVFEITASEYCTFNRADLFYSYRRDGVTGRMA
TLIWINK
>Mature_247_residues
MQLLKPNWSAPAHIQAFSSTRLGGVSSGLYSELNLGLHVGDDPLIVGKNRSTLANTLSLTGDICWLNQVHSTILLELKEN
TAGPLTADAAWSHCNNTPCIIMTADCLPVLITNKLGTFVCAIHAGWRGLCDGIIEKSIKIICAQLAVNANDLLVWLGPCI
GKSAFQVGSEVRAAFIAENGQASLAFSAFGDRWLADLQQLARLRLAPFNVFEITASEYCTFNRADLFYSYRRDGVTGRMA
TLIWINK

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Escherichia coli, GI1788945, Length=244, Percent_Identity=47.5409836065574, Blast_Score=229, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 26857; Mature: 26857

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLLKPNWSAPAHIQAFSSTRLGGVSSGLYSELNLGLHVGDDPLIVGKNRSTLANTLSLT
CCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCEEECCCCEEEECCCHHHHHHHHCC
GDICWLNQVHSTILLELKENTAGPLTADAAWSHCNNTPCIIMTADCLPVLITNKLGTFVC
CCEEHHHHHHHEEEEEECCCCCCCEECCHHHHHCCCCCEEEEECCCCEEEHHCCHHHEEE
AIHAGWRGLCDGIIEKSIKIICAQLAVNANDLLVWLGPCIGKSAFQVGSEVRAAFIAENG
EEHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHEEEEECCC
QASLAFSAFGDRWLADLQQLARLRLAPFNVFEITASEYCTFNRADLFYSYRRDGVTGRMA
CCEEEEHHHCHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCHHHHHHHHCCCCCCEEE
TLIWINK
EEEEEEC
>Mature Secondary Structure
MQLLKPNWSAPAHIQAFSSTRLGGVSSGLYSELNLGLHVGDDPLIVGKNRSTLANTLSLT
CCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCEEECCCCEEEECCCHHHHHHHHCC
GDICWLNQVHSTILLELKENTAGPLTADAAWSHCNNTPCIIMTADCLPVLITNKLGTFVC
CCEEHHHHHHHEEEEEECCCCCCCEECCHHHHHCCCCCEEEEECCCCEEEHHCCHHHEEE
AIHAGWRGLCDGIIEKSIKIICAQLAVNANDLLVWLGPCIGKSAFQVGSEVRAAFIAENG
EEHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHEEEEECCC
QASLAFSAFGDRWLADLQQLARLRLAPFNVFEITASEYCTFNRADLFYSYRRDGVTGRMA
CCEEEEHHHCHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCHHHHHHHHCCCCCCEEE
TLIWINK
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1906060; 9205837; 9278503; 2066329 [H]