Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946867
Identifier: 119946867
GI number: 119946867
Start: 4024900
End: 4025748
Strand: Reverse
Name: 119946867
Synonym: Ping_3261
Alternate gene names: NA
Gene position: 4025748-4024900 (Counterclockwise)
Preceding gene: 119946869
Following gene: 119946865
Centisome position: 88.29
GC content: 37.57
Gene sequence:
>849_bases ATGTTAGATGCAATTTGTAATTATGATCCTGACAATCCTAAAACCTATTCTATTTTTGAGTTTAAGATTTTAGCTGCGAG TGAGCTTGATAAATTACGCCATTTTCTAATCTGCCCTGTCTGTCAACAAAAAGCTTACTTTCGCAAAGCCTCTATTGATG GCAGACAAGCTTGTTTCGGCTCCCGTTACCATAAAATTGATTGTGCCGAGTTTAACCCCTCAGTGCGTAAAAAAGAGGAA GAAAAGCAGCTGCTTGAAGTTGAAAAAGTACTGCTTGAAAGCGATTCCTTAGTGATTGATTTTAGTGCTCCACTTGTTAA AGCTAAAAATATTCCAGAAAAAGCATCGAAGAGCGTCAAAAAAATCCCCAATAAAGTACTTAATACACAGCCTGCAGAAG TTCAAGAAGCTGCTAAATCAGAGTCAAAAGTCAGTAAGCAGGGGTTAAAAAAACTGCTGATGAGTTTATTGCGCGGTAGT TCGTTGGCGGATTCTGATCTTTGGATTTATACCAGTGAGAAACATAAATGGCGTGCTAAAAACCTGTTCGTCAATATTAG AGATGCGCAGCCCATGGAAAATAATGCTCCGCGTATCTATTGGGGAACTATTTCTAATGCGGATAAAACCTTAAATTGGC TTAATCCTGTGGAAAATTCCAGTGCTGCTTTACCGATTTCAAAGTATCGGGATGAGCTGTTAAGCCATTTTGATATTAAG GAGGCGGTTGATCTAGAAAGTGCAGGTTTTATCTTATTTGGAAAATGTGTATTAAGTAAGGACAAAAAACGTCGCTTTAT TCATTTATGGGGTAATGACCTGCAGTATCTCTATTTATTAAAAAAGTAA
Upstream 100 bases:
>100_bases CGCCGTTTTACGATTCTTAAGGACAGTTTTTTATGCGAATGAGGCTGCGGGATAGTGATATAGTTATGCTATCAATTGAT CCGCCATTGCAAGGGAAAAT
Downstream 100 bases:
>100_bases GCTGATCATGTCATTCCATAACAACAAAAAAAGGGCACTAGGCCCTTTTTTTAATGCCCATGTTTTGCATGGGAGATTAT ATTAACCCTATTAAGCGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MLDAICNYDPDNPKTYSIFEFKILAASELDKLRHFLICPVCQQKAYFRKASIDGRQACFGSRYHKIDCAEFNPSVRKKEE EKQLLEVEKVLLESDSLVIDFSAPLVKAKNIPEKASKSVKKIPNKVLNTQPAEVQEAAKSESKVSKQGLKKLLMSLLRGS SLADSDLWIYTSEKHKWRAKNLFVNIRDAQPMENNAPRIYWGTISNADKTLNWLNPVENSSAALPISKYRDELLSHFDIK EAVDLESAGFILFGKCVLSKDKKRRFIHLWGNDLQYLYLLKK
Sequences:
>Translated_282_residues MLDAICNYDPDNPKTYSIFEFKILAASELDKLRHFLICPVCQQKAYFRKASIDGRQACFGSRYHKIDCAEFNPSVRKKEE EKQLLEVEKVLLESDSLVIDFSAPLVKAKNIPEKASKSVKKIPNKVLNTQPAEVQEAAKSESKVSKQGLKKLLMSLLRGS SLADSDLWIYTSEKHKWRAKNLFVNIRDAQPMENNAPRIYWGTISNADKTLNWLNPVENSSAALPISKYRDELLSHFDIK EAVDLESAGFILFGKCVLSKDKKRRFIHLWGNDLQYLYLLKK >Mature_282_residues MLDAICNYDPDNPKTYSIFEFKILAASELDKLRHFLICPVCQQKAYFRKASIDGRQACFGSRYHKIDCAEFNPSVRKKEE EKQLLEVEKVLLESDSLVIDFSAPLVKAKNIPEKASKSVKKIPNKVLNTQPAEVQEAAKSESKVSKQGLKKLLMSLLRGS SLADSDLWIYTSEKHKWRAKNLFVNIRDAQPMENNAPRIYWGTISNADKTLNWLNPVENSSAALPISKYRDELLSHFDIK EAVDLESAGFILFGKCVLSKDKKRRFIHLWGNDLQYLYLLKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32303; Mature: 32303
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDAICNYDPDNPKTYSIFEFKILAASELDKLRHFLICPVCQQKAYFRKASIDGRQACFG CCCCCCCCCCCCCCEEEEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHC SRYHKIDCAEFNPSVRKKEEEKQLLEVEKVLLESDSLVIDFSAPLVKAKNIPEKASKSVK CCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCHHHHHHHH KIPNKVLNTQPAEVQEAAKSESKVSKQGLKKLLMSLLRGSSLADSDLWIYTSEKHKWRAK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEE NLFVNIRDAQPMENNAPRIYWGTISNADKTLNWLNPVENSSAALPISKYRDELLSHFDIK EEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHH EAVDLESAGFILFGKCVLSKDKKRRFIHLWGNDLQYLYLLKK HHHCCCCCCEEEEEHHHHCCCCCCEEEEEECCCEEEEEEECC >Mature Secondary Structure MLDAICNYDPDNPKTYSIFEFKILAASELDKLRHFLICPVCQQKAYFRKASIDGRQACFG CCCCCCCCCCCCCCEEEEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHC SRYHKIDCAEFNPSVRKKEEEKQLLEVEKVLLESDSLVIDFSAPLVKAKNIPEKASKSVK CCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCHHHHHHHH KIPNKVLNTQPAEVQEAAKSESKVSKQGLKKLLMSLLRGSSLADSDLWIYTSEKHKWRAK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEE NLFVNIRDAQPMENNAPRIYWGTISNADKTLNWLNPVENSSAALPISKYRDELLSHFDIK EEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHH EAVDLESAGFILFGKCVLSKDKKRRFIHLWGNDLQYLYLLKK HHHCCCCCCEEEEEHHHHCCCCCCEEEEEECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA