Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946760
Identifier: 119946760
GI number: 119946760
Start: 3882087
End: 3882944
Strand: Reverse
Name: 119946760
Synonym: Ping_3153
Alternate gene names: NA
Gene position: 3882944-3882087 (Counterclockwise)
Preceding gene: 119946764
Following gene: 119946759
Centisome position: 85.16
GC content: 44.17
Gene sequence:
>858_bases ATGAAAAAAACGGCAATAGCCATGATGATCAGCAGTCTTCTGCTAAGTGCGTGCGATGACTTAAAATCTGAAGATAATGC CCCAAAGTCGGCACTTGAAAATGCCCTTATAACGCCACAAACCTCCCCCGACAAGATAGCCCCAATCGCTTCCTTTACAC TGGCAAATGATATAACTGAGCGTGCTGAATTTTATTTCGATGGCTCAGCTTCCAGCGATTCCGATGGTGCTATCTCCACA TACAACTGGACAATCGACTTGGGACGATACAACGGTGACAACATTTACTTTAGTCAAAATAGTCAAAAAAAGACGAGCGC TACCCTCACTGCAGGAGAGCTTACGGAAGATATTACAGCCACTATTACCTTAACGGTCACTGATAATGATAATTCTACCG GTCAAATATCGAAGACCATTATTATCCGTGAACTTGATGTTGCTCTGCTCCCTCCTATGCCGGCAAATCCAAAGTCAGGA TTAACCGGCACAGACGCCGATGGCGATGGCGTTAGAGATGATTTAGAAATCGCTATTTATAATCTCTACCCACTTTCCAA AGATAATAGAGAGGTGTTACGTAATACTGCAGTGGTCTATCAAGATGTCCTTATTGCCGGTGACTCCCTTGATGATCTGG ATGACGGGGACGCCTCCGAAAAAATAGCAAAACTCGCTGCTTGTTATAACCTACATACTGAGCTTAATGGCCTTCAAGAG GTAGCAAAAATAAGGGCACTGACCTTTAACACTCAAGAGCGCTTAGCTGCATACGAAAAGTTCAAGGTGGGTCGAAACGG TACAGCACAAAGAACCGTAGAAGCGACTTTTGATGAATGCAGACTGCCTCAGCATTAA
Upstream 100 bases:
>100_bases CAAACAAATATTTACATAAACCTATCTTCTGACTAACCTTTTGGTCAATTAAAAGTATGAATAAAGTGTTTTTACATTTA ATGATAAAAGGAATTATATT
Downstream 100 bases:
>100_bases GGATAATATTATGAAAAAAAGATCATTATTGTTTCCTGCATTGTTGTGTGCGAGTTTAACCACCCCCTCATATGCAATGC TAAACGGCTGCGTTGACACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MKKTAIAMMISSLLLSACDDLKSEDNAPKSALENALITPQTSPDKIAPIASFTLANDITERAEFYFDGSASSDSDGAIST YNWTIDLGRYNGDNIYFSQNSQKKTSATLTAGELTEDITATITLTVTDNDNSTGQISKTIIIRELDVALLPPMPANPKSG LTGTDADGDGVRDDLEIAIYNLYPLSKDNREVLRNTAVVYQDVLIAGDSLDDLDDGDASEKIAKLAACYNLHTELNGLQE VAKIRALTFNTQERLAAYEKFKVGRNGTAQRTVEATFDECRLPQH
Sequences:
>Translated_285_residues MKKTAIAMMISSLLLSACDDLKSEDNAPKSALENALITPQTSPDKIAPIASFTLANDITERAEFYFDGSASSDSDGAIST YNWTIDLGRYNGDNIYFSQNSQKKTSATLTAGELTEDITATITLTVTDNDNSTGQISKTIIIRELDVALLPPMPANPKSG LTGTDADGDGVRDDLEIAIYNLYPLSKDNREVLRNTAVVYQDVLIAGDSLDDLDDGDASEKIAKLAACYNLHTELNGLQE VAKIRALTFNTQERLAAYEKFKVGRNGTAQRTVEATFDECRLPQH >Mature_285_residues MKKTAIAMMISSLLLSACDDLKSEDNAPKSALENALITPQTSPDKIAPIASFTLANDITERAEFYFDGSASSDSDGAIST YNWTIDLGRYNGDNIYFSQNSQKKTSATLTAGELTEDITATITLTVTDNDNSTGQISKTIIIRELDVALLPPMPANPKSG LTGTDADGDGVRDDLEIAIYNLYPLSKDNREVLRNTAVVYQDVLIAGDSLDDLDDGDASEKIAKLAACYNLHTELNGLQE VAKIRALTFNTQERLAAYEKFKVGRNGTAQRTVEATFDECRLPQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30959; Mature: 30959
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTAIAMMISSLLLSACDDLKSEDNAPKSALENALITPQTSPDKIAPIASFTLANDITE CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHH RAEFYFDGSASSDSDGAISTYNWTIDLGRYNGDNIYFSQNSQKKTSATLTAGELTEDITA HHHEEECCCCCCCCCCCEEEEEEEEEEEEECCCEEEECCCCCCCHHHEEEHHHHCCCEEE TITLTVTDNDNSTGQISKTIIIRELDVALLPPMPANPKSGLTGTDADGDGVRDDLEIAIY EEEEEEECCCCCCCEEEEEEEEEEECEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEE NLYPLSKDNREVLRNTAVVYQDVLIAGDSLDDLDDGDASEKIAKLAACYNLHTELNGLQE EEEECCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VAKIRALTFNTQERLAAYEKFKVGRNGTAQRTVEATFDECRLPQH HHHHHHHEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MKKTAIAMMISSLLLSACDDLKSEDNAPKSALENALITPQTSPDKIAPIASFTLANDITE CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHH RAEFYFDGSASSDSDGAISTYNWTIDLGRYNGDNIYFSQNSQKKTSATLTAGELTEDITA HHHEEECCCCCCCCCCCEEEEEEEEEEEEECCCEEEECCCCCCCHHHEEEHHHHCCCEEE TITLTVTDNDNSTGQISKTIIIRELDVALLPPMPANPKSGLTGTDADGDGVRDDLEIAIY EEEEEEECCCCCCCEEEEEEEEEEECEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEE NLYPLSKDNREVLRNTAVVYQDVLIAGDSLDDLDDGDASEKIAKLAACYNLHTELNGLQE EEEECCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VAKIRALTFNTQERLAAYEKFKVGRNGTAQRTVEATFDECRLPQH HHHHHHHEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA