Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946753
Identifier: 119946753
GI number: 119946753
Start: 3873499
End: 3873846
Strand: Reverse
Name: 119946753
Synonym: Ping_3146
Alternate gene names: NA
Gene position: 3873846-3873499 (Counterclockwise)
Preceding gene: 119946754
Following gene: 119946752
Centisome position: 84.96
GC content: 48.56
Gene sequence:
>348_bases ATGAGCGCTCCACTGGATGTATCCGCACAGCTGTCGTTGACTAATGAGAATGGCAAAACGATTTTACTGAGTGCGGAAAA AGAAATCATCACGGTAACGCTACCCAGTCTGTGGGTCGGTCGCCCGATTTTACGGCAGCTCAGCAATCGTGGGCAGCGCA CCCGGATGATAGAAAATGTCCATGGCGGTCTGAAGCTTACCGATTTGGTGATCGAATTTCGAATTGCTGATCGTGTCATT GCTCTGATCGCTCCACAGTCCGATTCTGGCTTAGTTTCTCGAATGCTGGGGGTTGGGCCTGTAGAGCTGAAAATAGTTCC AATCCTACTCTCTTTGTTCAAAAGATAA
Upstream 100 bases:
>100_bases TTCCAAGTGGCACCGGTGATGATGTTACCCATGCAAAATGGAAAATTAATGGTGCTATTAAAATCAGCAGCCGGGATACT TCCAAGGGGAGCTAGCTGCA
Downstream 100 bases:
>100_bases CCTCCACACCTTGACTGCATTTCAGAGCATGCCACGCCACAGACCTTAGTATTTTTGCTGTCCTAACTAAGGTCTGTTGA CTTTTTATGTCTAAATTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MSAPLDVSAQLSLTNENGKTILLSAEKEIITVTLPSLWVGRPILRQLSNRGQRTRMIENVHGGLKLTDLVIEFRIADRVI ALIAPQSDSGLVSRMLGVGPVELKIVPILLSLFKR
Sequences:
>Translated_115_residues MSAPLDVSAQLSLTNENGKTILLSAEKEIITVTLPSLWVGRPILRQLSNRGQRTRMIENVHGGLKLTDLVIEFRIADRVI ALIAPQSDSGLVSRMLGVGPVELKIVPILLSLFKR >Mature_114_residues SAPLDVSAQLSLTNENGKTILLSAEKEIITVTLPSLWVGRPILRQLSNRGQRTRMIENVHGGLKLTDLVIEFRIADRVIA LIAPQSDSGLVSRMLGVGPVELKIVPILLSLFKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12609; Mature: 12478
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPLDVSAQLSLTNENGKTILLSAEKEIITVTLPSLWVGRPILRQLSNRGQRTRMIENV CCCCCCCEEEEEEECCCCCEEEEECCCEEEEEECCCHHCCCHHHHHHHCCCHHHHHHHHH HGGLKLTDLVIEFRIADRVIALIAPQSDSGLVSRMLGVGPVELKIVPILLSLFKR CCCEEEEHHHHHHHHHCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SAPLDVSAQLSLTNENGKTILLSAEKEIITVTLPSLWVGRPILRQLSNRGQRTRMIENV CCCCCCEEEEEEECCCCCEEEEECCCEEEEEECCCHHCCCHHHHHHHCCCHHHHHHHHH HGGLKLTDLVIEFRIADRVIALIAPQSDSGLVSRMLGVGPVELKIVPILLSLFKR CCCEEEEHHHHHHHHHCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA