Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946721
Identifier: 119946721
GI number: 119946721
Start: 3817606
End: 3819213
Strand: Reverse
Name: 119946721
Synonym: Ping_3105
Alternate gene names: NA
Gene position: 3819213-3817606 (Counterclockwise)
Preceding gene: 119946722
Following gene: 119946719
Centisome position: 83.76
GC content: 41.11
Gene sequence:
>1608_bases ATGAAATCACTCGAACCGCTTGCTCATGAAAGTATTTATAGCTGGGTGGTTCGCTATCATCTTCAAATAGGCGTTGGGCA TGAAAAAAACACTTACCGACAGCTTTTTAATTATGAAAAAATACGTATTCATCCTTATCTGCCAAATCATGTTCAGTGCC TAGATAAGCTCGGTGGTAATACGGCTGATGTCTGGCTTGAAGATCATACGTTATATCCACTATTTAAGTTTTTTGGCCAT GATCTTAATAACAAGCTCAAGCAGGCGATGCTGACACACACCGGGAATACAGTCTCTGCGGCAAATATTGCCCAGTCTAG ACTGTGTTTCGAATATGGTCATAAGTATTGTCCTGTATGCCTCAAAGAACATTTAGAGCAGACTGGCATACCACGCTATG ACATTCGCTATCAAATCCCTGGGATGACTGTCTGCCCCAGACATAATTGCGAACTTAACATAATAAAATGTGGCGATATT GGTCTGGATAGGCGGCTCACGTTTCCTAAATCATTTGCCGTGATACCAACATTCAATCCGCTTTTAATAATCTTCGCACA ATTTTGCATGGATGTATTCGCCATAACAAAGCAACTTCCGTGTGATCCTTTGTTATTGCATCGTCTGTATTGGCATCATC TTGAAAAGCGAAATTTAGTCACTTTAGGCAAACAGTTAAGAATGAGCCTATTGGTGCTAGAGCTTGATAATTTCTATCAA GGTTTTGCATTTACCGCCGGATTAGAGTCATTAAGTTCATTTCATTTTTTAGGTCCATTACTCCGCTATAGGGCTCATAA ACCCAGTCATCCTATAAAGCATTTAATATTTGCATTTTGGTTATTCGATAAAGACGCTTCACTTTTTCAATCTGAGCAAG ATAGTCAGCCACAGCAGGTTGAGTGCAGCGAGCAAATACAGGCTAAACCAGATGAAACAGGTATTATCGCCATGCTCAGA AAAGGTCTCAGCATGGCCCATATAGAAAAAATAACGGGGAAAAGTCGCTGCTATATTCGTCGGTTGTCAGAGATTAATGG GATTGAGCATAAATCAAATCTGCAAGCGTTCTCAAATCGTATTAGGGTTATGGTTATTTTAAAAGCAAAGCTTGGTTGGC ATAGAAAGGCTATTGCAGAAGCGTTAAATGTAGGTTTAGGTTACGTAGAACAAGTGATATCCAATACAAAAAATCTCGTC TTATGGCGCAAGAAACTCCATGAGTTAAAAAATATAAATGCAGCTTTAAAGGAGCTGAGAAGGGCGAAAGTATTGCACCC GAGTTGGCTCCGCAAAGATTTCAAAGCTCAGCATAACAAAGCCTTTTTTTACCTTTACCGCCATGACCGAGAACTCCTTG AGTCCACTCTCCCTGTAAAGACAAAGCCTCATGTGCTGCGGCATGATTGGTCTATGGAGGACGAAAGGCTTTCTCAAGCA ATTTCCAACTTAGCGCCGGATGATAATATGTCGCTCACGGCAATTGCTCAACTGGTTCATGACAGGGGGCACTTGAAAAG AAAGCTTGATCATCTCCCTAAAACCAAAGCGTTGTTGATTGAATTGGGGAAAGTGGCTAAGCCCCCCCAAAAAAACACCA GTAGATGA
Upstream 100 bases:
>100_bases TATCTGGCCATAGTCAGGCAAAAGGACTACGTCATCCCTTATATTGGTTAGTTATTATCTTTTGGTTGCGTGATAAATTG CCTGAATGTAGTGAGTTGCT
Downstream 100 bases:
>100_bases ATTCTAAAGTGAGGGGATCTTATGGGATGTAGTGACGAAATATTCGACTTTCTTTTAAAACAGCATAGTGAAAAAGAAGT TGAACCGTTTATTTTATGCA
Product: transposon Tn7 transposition protein D
Products: NA
Alternate protein names: Tn7-Cj Transposition Protein TnsD; Transposon Tn7 Transposition Protein D; Tn7-Like Protein Transposition Protein D; Transposition Protein TnsD-Related Protein
Number of amino acids: Translated: 535; Mature: 535
Protein sequence:
>535_residues MKSLEPLAHESIYSWVVRYHLQIGVGHEKNTYRQLFNYEKIRIHPYLPNHVQCLDKLGGNTADVWLEDHTLYPLFKFFGH DLNNKLKQAMLTHTGNTVSAANIAQSRLCFEYGHKYCPVCLKEHLEQTGIPRYDIRYQIPGMTVCPRHNCELNIIKCGDI GLDRRLTFPKSFAVIPTFNPLLIIFAQFCMDVFAITKQLPCDPLLLHRLYWHHLEKRNLVTLGKQLRMSLLVLELDNFYQ GFAFTAGLESLSSFHFLGPLLRYRAHKPSHPIKHLIFAFWLFDKDASLFQSEQDSQPQQVECSEQIQAKPDETGIIAMLR KGLSMAHIEKITGKSRCYIRRLSEINGIEHKSNLQAFSNRIRVMVILKAKLGWHRKAIAEALNVGLGYVEQVISNTKNLV LWRKKLHELKNINAALKELRRAKVLHPSWLRKDFKAQHNKAFFYLYRHDRELLESTLPVKTKPHVLRHDWSMEDERLSQA ISNLAPDDNMSLTAIAQLVHDRGHLKRKLDHLPKTKALLIELGKVAKPPQKNTSR
Sequences:
>Translated_535_residues MKSLEPLAHESIYSWVVRYHLQIGVGHEKNTYRQLFNYEKIRIHPYLPNHVQCLDKLGGNTADVWLEDHTLYPLFKFFGH DLNNKLKQAMLTHTGNTVSAANIAQSRLCFEYGHKYCPVCLKEHLEQTGIPRYDIRYQIPGMTVCPRHNCELNIIKCGDI GLDRRLTFPKSFAVIPTFNPLLIIFAQFCMDVFAITKQLPCDPLLLHRLYWHHLEKRNLVTLGKQLRMSLLVLELDNFYQ GFAFTAGLESLSSFHFLGPLLRYRAHKPSHPIKHLIFAFWLFDKDASLFQSEQDSQPQQVECSEQIQAKPDETGIIAMLR KGLSMAHIEKITGKSRCYIRRLSEINGIEHKSNLQAFSNRIRVMVILKAKLGWHRKAIAEALNVGLGYVEQVISNTKNLV LWRKKLHELKNINAALKELRRAKVLHPSWLRKDFKAQHNKAFFYLYRHDRELLESTLPVKTKPHVLRHDWSMEDERLSQA ISNLAPDDNMSLTAIAQLVHDRGHLKRKLDHLPKTKALLIELGKVAKPPQKNTSR >Mature_535_residues MKSLEPLAHESIYSWVVRYHLQIGVGHEKNTYRQLFNYEKIRIHPYLPNHVQCLDKLGGNTADVWLEDHTLYPLFKFFGH DLNNKLKQAMLTHTGNTVSAANIAQSRLCFEYGHKYCPVCLKEHLEQTGIPRYDIRYQIPGMTVCPRHNCELNIIKCGDI GLDRRLTFPKSFAVIPTFNPLLIIFAQFCMDVFAITKQLPCDPLLLHRLYWHHLEKRNLVTLGKQLRMSLLVLELDNFYQ GFAFTAGLESLSSFHFLGPLLRYRAHKPSHPIKHLIFAFWLFDKDASLFQSEQDSQPQQVECSEQIQAKPDETGIIAMLR KGLSMAHIEKITGKSRCYIRRLSEINGIEHKSNLQAFSNRIRVMVILKAKLGWHRKAIAEALNVGLGYVEQVISNTKNLV LWRKKLHELKNINAALKELRRAKVLHPSWLRKDFKAQHNKAFFYLYRHDRELLESTLPVKTKPHVLRHDWSMEDERLSQA ISNLAPDDNMSLTAIAQLVHDRGHLKRKLDHLPKTKALLIELGKVAKPPQKNTSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62038; Mature: 62038
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLEPLAHESIYSWVVRYHLQIGVGHEKNTYRQLFNYEKIRIHPYLPNHVQCLDKLGGN CCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCC TADVWLEDHTLYPLFKFFGHDLNNKLKQAMLTHTGNTVSAANIAQSRLCFEYGHKYCPVC EEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHH LKEHLEQTGIPRYDIRYQIPGMTVCPRHNCELNIIKCGDIGLDRRLTFPKSFAVIPTFNP HHHHHHHCCCCCEEEEEECCCEEECCCCCCEEEEEEECCCCCCCEECCCCCEEECCCCCH LLIIFAQFCMDVFAITKQLPCDPLLLHRLYWHHLEKRNLVTLGKQLRMSLLVLELDNFYQ HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH GFAFTAGLESLSSFHFLGPLLRYRAHKPSHPIKHLIFAFWLFDKDASLFQSEQDSQPQQV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCC ECSEQIQAKPDETGIIAMLRKGLSMAHIEKITGKSRCYIRRLSEINGIEHKSNLQAFSNR CHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCC IRVMVILKAKLGWHRKAIAEALNVGLGYVEQVISNTKNLVLWRKKLHELKNINAALKELR EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RAKVLHPSWLRKDFKAQHNKAFFYLYRHDRELLESTLPVKTKPHVLRHDWSMEDERLSQA HHHCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHH ISNLAPDDNMSLTAIAQLVHDRGHLKRKLDHLPKTKALLIELGKVAKPPQKNTSR HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKSLEPLAHESIYSWVVRYHLQIGVGHEKNTYRQLFNYEKIRIHPYLPNHVQCLDKLGGN CCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCC TADVWLEDHTLYPLFKFFGHDLNNKLKQAMLTHTGNTVSAANIAQSRLCFEYGHKYCPVC EEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHH LKEHLEQTGIPRYDIRYQIPGMTVCPRHNCELNIIKCGDIGLDRRLTFPKSFAVIPTFNP HHHHHHHCCCCCEEEEEECCCEEECCCCCCEEEEEEECCCCCCCEECCCCCEEECCCCCH LLIIFAQFCMDVFAITKQLPCDPLLLHRLYWHHLEKRNLVTLGKQLRMSLLVLELDNFYQ HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH GFAFTAGLESLSSFHFLGPLLRYRAHKPSHPIKHLIFAFWLFDKDASLFQSEQDSQPQQV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCC ECSEQIQAKPDETGIIAMLRKGLSMAHIEKITGKSRCYIRRLSEINGIEHKSNLQAFSNR CHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCC IRVMVILKAKLGWHRKAIAEALNVGLGYVEQVISNTKNLVLWRKKLHELKNINAALKELR EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RAKVLHPSWLRKDFKAQHNKAFFYLYRHDRELLESTLPVKTKPHVLRHDWSMEDERLSQA HHHCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHH ISNLAPDDNMSLTAIAQLVHDRGHLKRKLDHLPKTKALLIELGKVAKPPQKNTSR HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA