Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946717
Identifier: 119946717
GI number: 119946717
Start: 3812492
End: 3813424
Strand: Reverse
Name: 119946717
Synonym: Ping_3101
Alternate gene names: NA
Gene position: 3813424-3812492 (Counterclockwise)
Preceding gene: 119946719
Following gene: 119946716
Centisome position: 83.64
GC content: 33.01
Gene sequence:
>933_bases ATGAAAAAAGAAACCTCTTCAAAATATAAGTATACAAAGCAAATACTAAAGTTAGCCCACCAAGATGGTATGAGCTACGC AGATATTGCAGTGAAAGCGGGAATATCTGCGAACAGTAAAAACCAAGTTAATAAATGGATTACGGGTAAATCCCTTGCGA CTCAAAGACAAATGCAATTTTTCATAAATGCTTATAGTTCAGCTCTTAAGCGGAAAATGGAACATCTTTTTTATAGTAAT ATAAATAGAATTGAGATCACAGAAAAGCTGCTTACTACCATAAAACATCTTCAGATAGATGCTGAAATTAACATACCTAG CGACATCTCCGATAAAAATAGCTCTCTTAAAAAATGCAATTTAGCAATTCTGACAACCGAACAAAAAGATTATTTACTTA ACGGAATCCTTCCTAATGAATTATCCCGAAGAATTTCAGATTCGATTATTCAAGCTATAAAAAGTAATGAAATTAGCCGT TCTAGCAGTGGCCTACAGTTCCGCCCAAATTTTTTCAAATTAAATGGAGAAGTTGTCTTCAAACATACAATCTATTTACG AGAAACAATTAGCCATAACAAAACACCTAAAATTGCTCATAAACGTCTTTTATTATTACAAGCTGATAATTTATTTCACC TGATTTATCAAGACCGAATCGAAGGCTTCAAAAATCAACCAATATGTTCTTCAAATGAAGATTCTATGTGGGATAGCTCA GCAACAACTTTCATCGAATTAAATTATGTTTTGCAATTAATTGATCAATTTACAACTACCTTACTAATTGAGGAATATAG GCGATATTTAGGTGATTCAATCACAATACCATTCATTGCTAGACAAGCGTTGTTAAAGCAAGGCTTCCCTATTCCAGATG TTATTGACCTATCTGCTAAAAGTGAGATAATCAAAGAACCCCAAAAGGGCTAG
Upstream 100 bases:
>100_bases GGCTGATGGGCATAATCCGAATAATGATGATTATTTAGATTGAAATAAAAATCATGTGCCAGATGGCCGAACACTGGCAC ATTCAATTAAGTAGATATTT
Downstream 100 bases:
>100_bases AAGCTCCTTAAGCTTCTCATCGAGTTGGATACACAACTCATTATAAATGTTTATCCTGAAATGGAGCACCGCAATAATAA AACCTACTATGTACGTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MKKETSSKYKYTKQILKLAHQDGMSYADIAVKAGISANSKNQVNKWITGKSLATQRQMQFFINAYSSALKRKMEHLFYSN INRIEITEKLLTTIKHLQIDAEINIPSDISDKNSSLKKCNLAILTTEQKDYLLNGILPNELSRRISDSIIQAIKSNEISR SSSGLQFRPNFFKLNGEVVFKHTIYLRETISHNKTPKIAHKRLLLLQADNLFHLIYQDRIEGFKNQPICSSNEDSMWDSS ATTFIELNYVLQLIDQFTTTLLIEEYRRYLGDSITIPFIARQALLKQGFPIPDVIDLSAKSEIIKEPQKG
Sequences:
>Translated_310_residues MKKETSSKYKYTKQILKLAHQDGMSYADIAVKAGISANSKNQVNKWITGKSLATQRQMQFFINAYSSALKRKMEHLFYSN INRIEITEKLLTTIKHLQIDAEINIPSDISDKNSSLKKCNLAILTTEQKDYLLNGILPNELSRRISDSIIQAIKSNEISR SSSGLQFRPNFFKLNGEVVFKHTIYLRETISHNKTPKIAHKRLLLLQADNLFHLIYQDRIEGFKNQPICSSNEDSMWDSS ATTFIELNYVLQLIDQFTTTLLIEEYRRYLGDSITIPFIARQALLKQGFPIPDVIDLSAKSEIIKEPQKG >Mature_310_residues MKKETSSKYKYTKQILKLAHQDGMSYADIAVKAGISANSKNQVNKWITGKSLATQRQMQFFINAYSSALKRKMEHLFYSN INRIEITEKLLTTIKHLQIDAEINIPSDISDKNSSLKKCNLAILTTEQKDYLLNGILPNELSRRISDSIIQAIKSNEISR SSSGLQFRPNFFKLNGEVVFKHTIYLRETISHNKTPKIAHKRLLLLQADNLFHLIYQDRIEGFKNQPICSSNEDSMWDSS ATTFIELNYVLQLIDQFTTTLLIEEYRRYLGDSITIPFIARQALLKQGFPIPDVIDLSAKSEIIKEPQKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35552; Mature: 35552
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKETSSKYKYTKQILKLAHQDGMSYADIAVKAGISANSKNQVNKWITGKSLATQRQMQF CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHH FINAYSSALKRKMEHLFYSNINRIEITEKLLTTIKHLQIDAEINIPSDISDKNSSLKKCN HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHCE LAILTTEQKDYLLNGILPNELSRRISDSIIQAIKSNEISRSSSGLQFRPNFFKLNGEVVF EEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEECCEEEE KHTIYLRETISHNKTPKIAHKRLLLLQADNLFHLIYQDRIEGFKNQPICSSNEDSMWDSS EEHHHHHHHHCCCCCCHHHHHEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC ATTFIELNYVLQLIDQFTTTLLIEEYRRYLGDSITIPFIARQALLKQGFPIPDVIDLSAK CCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEECCCHH SEIIKEPQKG HHHHCCCCCC >Mature Secondary Structure MKKETSSKYKYTKQILKLAHQDGMSYADIAVKAGISANSKNQVNKWITGKSLATQRQMQF CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHH FINAYSSALKRKMEHLFYSNINRIEITEKLLTTIKHLQIDAEINIPSDISDKNSSLKKCN HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHCE LAILTTEQKDYLLNGILPNELSRRISDSIIQAIKSNEISRSSSGLQFRPNFFKLNGEVVF EEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEECCEEEE KHTIYLRETISHNKTPKIAHKRLLLLQADNLFHLIYQDRIEGFKNQPICSSNEDSMWDSS EEHHHHHHHHCCCCCCHHHHHEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC ATTFIELNYVLQLIDQFTTTLLIEEYRRYLGDSITIPFIARQALLKQGFPIPDVIDLSAK CCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEECCCHH SEIIKEPQKG HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA