Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946698
Identifier: 119946698
GI number: 119946698
Start: 3779596
End: 3781431
Strand: Reverse
Name: 119946698
Synonym: Ping_3080
Alternate gene names: NA
Gene position: 3781431-3779596 (Counterclockwise)
Preceding gene: 119946699
Following gene: 119946697
Centisome position: 82.93
GC content: 49.78
Gene sequence:
>1836_bases ATGACGAAGTACATATTTAAAGGGAAACTACGCGCCTATATTTGTAAAGAATGTCTGGACGTTCTCGCCAATGTCCAAGT GCGGATTTATCGGCACCGGAGCGATCAGGATGTCTCTGGCTTGGTGGCCGCAGAGTCGAAACATACTTTTGTAGTGCTTT CTGATGACGACGTAAAGGCCAAGGAGCAGTATCTGATTGCCGAGGCCCGCACCGATCAAAATGGCGAATTTACTGTTCAG ATCAACGCCGAAAAGAATAAATATTCAGGTGAGGCATTTGAGGTAGATGTGCGTATGACTACTATGCCGGGCCGCGATCC GGATGCCAAGCCGATCCCTGTGCAATTCGCCATTACCTCGTTAGAGCCGGAATGGACTCAGCAAGACAAGCAATATACTA CCGCTTACTGGGATTATATCATTAGCTCACGTCACTGGTGTTATCTGCTTGCCTATTATGATGTCTGGGTTATCTGTGGA AAATTTGTTACCTGCGAGGGGAAAAAGCCACTTCCTGGCGCCATCATTCGTGCTTTCGATTCTGACTGGGTCCAGCACGA TTCGCTTGGCGAAACAACAACTGACTTTAACGGTCGCTTCCGTATCTATTACACCTCCGCCACTTTCAAAAAAACCCCAT TCTCACCCTTAATTAACATTGAGCTCACCGGTGGGCCGGATCTTTTCTTTCAGGCCGAGTTTGGCGGCAGCCTGGTTATC AATGAAAGCTCCTTGGCAGGTCGTAAGCCCGGTCGCGAGAATGTCGGCCATTGCGTCTGTATTGAGTTATGTACTGATAA GATTGTCCCGCCGGACGCAGATGAAATTCCCCATTGGGAACGTGTCGAGGACTTGGAGGTGGACACGGATTTCTCTCCTG AAGGCTACGGTGGTGCGAGCTCACTGGTAATGCATGACTGTATCGAGCTATTTGGCAATATGCCACTGAAGAACACCGCC AATAACAAGGCGCTTAAATATCGCTTCCTTATTGCCCCGTGGACCTGGCCTGGCGCCGAAGATCCGGCGGTCATCCCACC CAATGCCCCGGCCGATGGCGACCTTGTCCCAGTAAAATCGATCTGCACCACCAAAGTGGGTTATATCTATTATACCGATG CCAATGGTGACCCTCGTTCTGCGCCGGTCAATCTGAATTCGAGTAATCTGGATGGTGACGGTTGCATTACCCTGCTTGGG ACGTTGGTCAAGGTAGATATGCACGATGGCACAATGGCAGACAAAGCCGTTACTGAAGAAAATTTTGTCGGAGCATATTT GCTGATGCAATTGAATTCAATCGCCTATACTCCCGCACCTTACAGCCCGAATGAATATCTGGGACTGGCAGCGGCAGGCA GCGCAGTTGCAGTGGTGGATCGTGCTCCGATTCGGCGCTTTAAATTGCGCTTTCAGGTGTATGATGATGGCCAGGCAGTC AATCAGATCGCCAATAACAAGACACTCAATGCTCTTGTGATTGACAACTCACCGGTGAAATATGCGTTGAACCTGACTGA ATTGGCGGGTGACTTGTGTAATAAGGTCACCAACGATGTACATATCCTTTACACCATCGACCACCCGCACTTGAGTTACT TCAACATTACGATTGAAAATAATAGCGGCATAGTGCACAGCGCGCCGCCACTACCTAACGGCGCGTTCAGCGGAAACTTT TTTTTCAGGGGTGGGGAAAGTGGCGCTGCTGGCTTTCCGGTGATTGTCTCAGGCGACCCCGTCTGTGCATACGCCGTCAA GCTTAGTTGGGCGACCAGGCACTATCACAGCAACAGGGGGTACAACATGCATACCCAGATACTTTATTGCAAATAA
Upstream 100 bases:
>100_bases ATATGGTAAGAATTTTAGTACTGGTAAAAGCCTTATCTTACGGAAAAGTTACCAGCCAAATCTTAAAAGTGCAAAATACA CATATTAAGGAATTTATGTT
Downstream 100 bases:
>100_bases GATGTGACTTTTCGGGAAGTAGGCGCTAAGCGTTAAAAAGGGGGCAGGTTCAAGCCTGTCCCCTTTGAATTAAACGCAAA TGAAAATGCAAAGCCCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 611; Mature: 610
Protein sequence:
>611_residues MTKYIFKGKLRAYICKECLDVLANVQVRIYRHRSDQDVSGLVAAESKHTFVVLSDDDVKAKEQYLIAEARTDQNGEFTVQ INAEKNKYSGEAFEVDVRMTTMPGRDPDAKPIPVQFAITSLEPEWTQQDKQYTTAYWDYIISSRHWCYLLAYYDVWVICG KFVTCEGKKPLPGAIIRAFDSDWVQHDSLGETTTDFNGRFRIYYTSATFKKTPFSPLINIELTGGPDLFFQAEFGGSLVI NESSLAGRKPGRENVGHCVCIELCTDKIVPPDADEIPHWERVEDLEVDTDFSPEGYGGASSLVMHDCIELFGNMPLKNTA NNKALKYRFLIAPWTWPGAEDPAVIPPNAPADGDLVPVKSICTTKVGYIYYTDANGDPRSAPVNLNSSNLDGDGCITLLG TLVKVDMHDGTMADKAVTEENFVGAYLLMQLNSIAYTPAPYSPNEYLGLAAAGSAVAVVDRAPIRRFKLRFQVYDDGQAV NQIANNKTLNALVIDNSPVKYALNLTELAGDLCNKVTNDVHILYTIDHPHLSYFNITIENNSGIVHSAPPLPNGAFSGNF FFRGGESGAAGFPVIVSGDPVCAYAVKLSWATRHYHSNRGYNMHTQILYCK
Sequences:
>Translated_611_residues MTKYIFKGKLRAYICKECLDVLANVQVRIYRHRSDQDVSGLVAAESKHTFVVLSDDDVKAKEQYLIAEARTDQNGEFTVQ INAEKNKYSGEAFEVDVRMTTMPGRDPDAKPIPVQFAITSLEPEWTQQDKQYTTAYWDYIISSRHWCYLLAYYDVWVICG KFVTCEGKKPLPGAIIRAFDSDWVQHDSLGETTTDFNGRFRIYYTSATFKKTPFSPLINIELTGGPDLFFQAEFGGSLVI NESSLAGRKPGRENVGHCVCIELCTDKIVPPDADEIPHWERVEDLEVDTDFSPEGYGGASSLVMHDCIELFGNMPLKNTA NNKALKYRFLIAPWTWPGAEDPAVIPPNAPADGDLVPVKSICTTKVGYIYYTDANGDPRSAPVNLNSSNLDGDGCITLLG TLVKVDMHDGTMADKAVTEENFVGAYLLMQLNSIAYTPAPYSPNEYLGLAAAGSAVAVVDRAPIRRFKLRFQVYDDGQAV NQIANNKTLNALVIDNSPVKYALNLTELAGDLCNKVTNDVHILYTIDHPHLSYFNITIENNSGIVHSAPPLPNGAFSGNF FFRGGESGAAGFPVIVSGDPVCAYAVKLSWATRHYHSNRGYNMHTQILYCK >Mature_610_residues TKYIFKGKLRAYICKECLDVLANVQVRIYRHRSDQDVSGLVAAESKHTFVVLSDDDVKAKEQYLIAEARTDQNGEFTVQI NAEKNKYSGEAFEVDVRMTTMPGRDPDAKPIPVQFAITSLEPEWTQQDKQYTTAYWDYIISSRHWCYLLAYYDVWVICGK FVTCEGKKPLPGAIIRAFDSDWVQHDSLGETTTDFNGRFRIYYTSATFKKTPFSPLINIELTGGPDLFFQAEFGGSLVIN ESSLAGRKPGRENVGHCVCIELCTDKIVPPDADEIPHWERVEDLEVDTDFSPEGYGGASSLVMHDCIELFGNMPLKNTAN NKALKYRFLIAPWTWPGAEDPAVIPPNAPADGDLVPVKSICTTKVGYIYYTDANGDPRSAPVNLNSSNLDGDGCITLLGT LVKVDMHDGTMADKAVTEENFVGAYLLMQLNSIAYTPAPYSPNEYLGLAAAGSAVAVVDRAPIRRFKLRFQVYDDGQAVN QIANNKTLNALVIDNSPVKYALNLTELAGDLCNKVTNDVHILYTIDHPHLSYFNITIENNSGIVHSAPPLPNGAFSGNFF FRGGESGAAGFPVIVSGDPVCAYAVKLSWATRHYHSNRGYNMHTQILYCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67716; Mature: 67585
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYIFKGKLRAYICKECLDVLANVQVRIYRHRSDQDVSGLVAAESKHTFVVLSDDDVKA CCCEEEECHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCC KEQYLIAEARTDQNGEFTVQINAEKNKYSGEAFEVDVRMTTMPGRDPDAKPIPVQFAITS CCEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEE LEPEWTQQDKQYTTAYWDYIISSRHWCYLLAYYDVWVICGKFVTCEGKKPLPGAIIRAFD CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCEEEECCCCCCCHHHHEECC SDWVQHDSLGETTTDFNGRFRIYYTSATFKKTPFSPLINIELTGGPDLFFQAEFGGSLVI CCHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEE NESSLAGRKPGRENVGHCVCIELCTDKIVPPDADEIPHWERVEDLEVDTDFSPEGYGGAS ECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHH SLVMHDCIELFGNMPLKNTANNKALKYRFLIAPWTWPGAEDPAVIPPNAPADGDLVPVKS HHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEECCCCCCCCCEEEHHH ICTTKVGYIYYTDANGDPRSAPVNLNSSNLDGDGCITLLGTLVKVDMHDGTMADKAVTEE HHCCEEEEEEEECCCCCCCCCCEECCCCCCCCCHHHHHEEEEEEEECCCCCCCHHHCCCC NFVGAYLLMQLNSIAYTPAPYSPNEYLGLAAAGSAVAVVDRAPIRRFKLRFQVYDDGQAV CCCCEEEEEEHHCEEECCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEEEEECCCHHH NQIANNKTLNALVIDNSPVKYALNLTELAGDLCNKVTNDVHILYTIDHPHLSYFNITIEN HHHHCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEEEC NSGIVHSAPPLPNGAFSGNFFFRGGESGAAGFPVIVSGDPVCAYAVKLSWATRHYHSNRG CCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCEEEEEEEEEEEEEEEECCCC YNMHTQILYCK CCEEEEEEEEC >Mature Secondary Structure TKYIFKGKLRAYICKECLDVLANVQVRIYRHRSDQDVSGLVAAESKHTFVVLSDDDVKA CCEEEECHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCC KEQYLIAEARTDQNGEFTVQINAEKNKYSGEAFEVDVRMTTMPGRDPDAKPIPVQFAITS CCEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEE LEPEWTQQDKQYTTAYWDYIISSRHWCYLLAYYDVWVICGKFVTCEGKKPLPGAIIRAFD CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCEEEECCCCCCCHHHHEECC SDWVQHDSLGETTTDFNGRFRIYYTSATFKKTPFSPLINIELTGGPDLFFQAEFGGSLVI CCHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEE NESSLAGRKPGRENVGHCVCIELCTDKIVPPDADEIPHWERVEDLEVDTDFSPEGYGGAS ECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHH SLVMHDCIELFGNMPLKNTANNKALKYRFLIAPWTWPGAEDPAVIPPNAPADGDLVPVKS HHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEECCCCCCCCCEEEHHH ICTTKVGYIYYTDANGDPRSAPVNLNSSNLDGDGCITLLGTLVKVDMHDGTMADKAVTEE HHCCEEEEEEEECCCCCCCCCCEECCCCCCCCCHHHHHEEEEEEEECCCCCCCHHHCCCC NFVGAYLLMQLNSIAYTPAPYSPNEYLGLAAAGSAVAVVDRAPIRRFKLRFQVYDDGQAV CCCCEEEEEEHHCEEECCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEEEEECCCHHH NQIANNKTLNALVIDNSPVKYALNLTELAGDLCNKVTNDVHILYTIDHPHLSYFNITIEN HHHHCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEEEC NSGIVHSAPPLPNGAFSGNFFFRGGESGAAGFPVIVSGDPVCAYAVKLSWATRHYHSNRG CCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCEEEEEEEEEEEEEEEECCCC YNMHTQILYCK CCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA