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The map label for this gene is yjbI [H]

Identifier: 119946692

GI number: 119946692

Start: 3773813

End: 3774229

Strand: Reverse

Name: yjbI [H]

Synonym: Ping_3074

Alternate gene names: 119946692

Gene position: 3774229-3773813 (Counterclockwise)

Preceding gene: 119946693

Following gene: 119946691

Centisome position: 82.78

GC content: 35.73

Gene sequence:

>417_bases
ATGATGAGTTTTAGAAATTGTGAATATGGTGTAGGAGACAACCCTTACATAATGGCGGGACAGTTGTCTGGTATTACTAA
ACTTGTTGATGATTTTTATAATAATATGGATGTTTTTTCAACATCAAAAAAAATTAGAGATATGCATTCGAGTGATTTAT
CAGAGTCTCGAAAAAAACTCTCCTATTTTTTGTCTGGTTGGCTTGGTGGACCGAAATTGTATACTGAGCATTACGGGAGT
ATCAATATTCCCTTAGCACATAAGCATTTGTCAGTAGGTATTGAGGAAAGCGAAGCATGGCTTTTATGTATGCAAAAAGC
CGTAGATCAACAACCCTATGAACCATCATTTAAAGTTTATTTAATGGCACAATTACGTGTTCCAGCAGAACGAATTAGAA
CAGTGTCAGGCACCTAA

Upstream 100 bases:

>100_bases
ATTGTTATCAGAAGAAGGGGGATTCGTCTTTTCAGTTTTTAGCCCGTTAACTTTTTAATCTGTTAACAAGGGCGTAGTGT
ATCAAATAGGGTTGGGTTCA

Downstream 100 bases:

>100_bases
GCGAACAAGAATGCATTCCAGCAGAACGAATTAGATCAGTGTCAGGCACCTAAGTGAACAAGAATGCATTCCAGCAGAAC
GAATTAGAATGATGTCAGGC

Product: globin

Products: NA

Alternate protein names: Truncated Hb; trHbO; Hemoglobin-like protein yjbI; Truncated BHb [H]

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MMSFRNCEYGVGDNPYIMAGQLSGITKLVDDFYNNMDVFSTSKKIRDMHSSDLSESRKKLSYFLSGWLGGPKLYTEHYGS
INIPLAHKHLSVGIEESEAWLLCMQKAVDQQPYEPSFKVYLMAQLRVPAERIRTVSGT

Sequences:

>Translated_138_residues
MMSFRNCEYGVGDNPYIMAGQLSGITKLVDDFYNNMDVFSTSKKIRDMHSSDLSESRKKLSYFLSGWLGGPKLYTEHYGS
INIPLAHKHLSVGIEESEAWLLCMQKAVDQQPYEPSFKVYLMAQLRVPAERIRTVSGT
>Mature_138_residues
MMSFRNCEYGVGDNPYIMAGQLSGITKLVDDFYNNMDVFSTSKKIRDMHSSDLSESRKKLSYFLSGWLGGPKLYTEHYGS
INIPLAHKHLSVGIEESEAWLLCMQKAVDQQPYEPSFKVYLMAQLRVPAERIRTVSGT

Specific function: Hemoglobin-like protein that exhibits a low peroxidase activity. Its very high oxygen affinity may rule out the possibility that it is involved in oxygen transport [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group II subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 15693; Mature: 15693

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSFRNCEYGVGDNPYIMAGQLSGITKLVDDFYNNMDVFSTSKKIRDMHSSDLSESRKKL
CCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHH
SYFLSGWLGGPKLYTEHYGSINIPLAHKHLSVGIEESEAWLLCMQKAVDQQPYEPSFKVY
HHHHHHHCCCCEEHHHCCCCCCCCEECHHEECCCCCCHHHHHHHHHHHCCCCCCCCEEEE
LMAQLRVPAERIRTVSGT
EEEECCCCHHHHHCCCCC
>Mature Secondary Structure
MMSFRNCEYGVGDNPYIMAGQLSGITKLVDDFYNNMDVFSTSKKIRDMHSSDLSESRKKL
CCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHH
SYFLSGWLGGPKLYTEHYGSINIPLAHKHLSVGIEESEAWLLCMQKAVDQQPYEPSFKVY
HHHHHHHCCCCEEHHHCCCCCCCCEECHHEECCCCCCHHHHHHHHHHHCCCCCCCCEEEE
LMAQLRVPAERIRTVSGT
EEEECCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]