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The map label for this gene is 119946441

Identifier: 119946441

GI number: 119946441

Start: 3461817

End: 3463790

Strand: Direct

Name: 119946441

Synonym: Ping_2816

Alternate gene names: NA

Gene position: 3461817-3463790 (Clockwise)

Preceding gene: 119946440

Following gene: 119946442

Centisome position: 75.92

GC content: 40.63

Gene sequence:

>1974_bases
ATGCTGCCTGACACCAGTTTAATACCTTTAGAATTTTTACGTCCATTTTGGTTGCTGGGTCTTGCTGCTGTTTTTTTATT
GGCCTTATTTCGTTATCAAACCGGCAAAAAACAACAACATCAGAGTTTGATTGCCGCACACTTAAGCGAGCACTTAGTAA
AGGTCCCTAAAAATACCTTTTCAGTCTTCTTAGCCTTTAACTTACTAGCGATTATTGCCTGCATTTCCCTGTCGGGGCCC
TCTTGGCGGCAGCATGATTTACCGGTTTACGAAATGCACAAAGCACAAGTCATTGCCCTGGATCTTTCCTATTCGATGTA
TGCCACAGATGCTAAACCAGACCGTTTAAGTCAGGCAAGATATAAAGTCATTGACTTGGTTAAAAGCTGGGAAGAAGGTG
AAAAAGGCTTAATTGCCTATGCGGGAGATGCCTTTACTATTTCGCCTTTAACCACAGACGGGAATGCTATCATCAACCAT
ATTCCCTCTCTTTCACCAACGATTATGCCGGTGACAGGTTCGCGAGCCGATTTGGCTTTAGAGCAAGCTATCACACTGCT
CAAAAATGCCGGTTATCAGCAGGGGCATATTGTTTTTATCACCGATGGCATTGACCCAAACAGCGCAGCAATAATGATAA
ACAGATTAAAAGGCAGTCCCTGGATTGTTTCAATACTTGCCATGGGCAGTCAACAGGGAGCCCCCATTAAACTGCCTGAG
GGTGGTTTATTAAAAGATCAGGCCGGACAAATAGTGATTCCTACCTTAAATATCCCCCCCTTGATTGATATAACCCGTGC
AAGCGGCGGCTTATATGTCAATGTGAGTAATAGAAACACTGATATAGAGCAATTATCCAAACAGTTTTCGGTTAACCAGG
GTGTTAAAAAAGAATCGCAGCAGCAGGGAAAAAATAAACTGGCTGTCGATGATGGTTATTGGCTGGCTTTTTTATTAATG
CCACTGTTTTTATTACTGTTTAGAAAAGGCCTTTTTTACACTCTGTTATTAGCCCTGACGCTGCCGGTTGCAACACCCGA
AGTGCAAGCTTCAATATGGAAAAACAACCAACAAAATGCATTTCAGGCCTACCAAAATCAAGACTATGCACAAGCTCGTG
AGTTATATGATAGCCCACTGGAAAAAGGCAGTGCTTTATATAAAAACAAACAATATCAGCAGGCATTAACGAAATTTACC
CAAGCGACTATTAATAGACCCGAAAGTGCTGCCGCCTTTTATAATCAGGGTAATGCTTATGCACAGTTGCACAATGCAGA
TAAAGCCATTGCCGCATATCAACAATCGCTCAAGTTAAACCCGACGTTAAAAGAGGCTCAGGAGAATATTGATTTATTAA
AACAATTAAAAGAACAACAAAGTAAACAGGAGGACAGCGAGCAACAGAAAAACAGCGAACAGCAAAAAAATAACGAACAA
CAGAAAAATAGCGAGCAGCAAAAAAATAACGAACAACAGAAAAATAGCGAGCAACAGAAAAACAGCGAGCAGCAAAAAAA
TAACGAACAGCAGAAAAATAACGAGCAGCAGAAAAATAACGAGCAGCAGAAAAATAACGAGCAGCAGAAAAATAACGAGC
AGCAGAAAAATAACGAGCAGCAGAAAAATAACGAGCAGCAAAAAAATAACGAGCAACAGAAAAACAGCGAGCAGCAAAAA
AATAACGAGCAACAGAAAAACAGCGAGCAGCAAAAAAATAACGAGCAGCAGAAAAATAACGAGCAGCAAAAAAATAACGA
GCAGCAGACAAACGACAAGCAGCAAATGACAGCAAAAGAAGTACAGAGTACAGAACAGCCCGAGGTGAATCAGGAGCTTG
AGGCGCTGCCTAATTGGTTAAAAAATATGCCTGATGATCCCTCAATATTATTACGTAATAAAATGCGTCTTGAATATCAA
AAAAGAGCACAATCAAATTCAGTCCAGCAAGAAAACAATGGAGTTATCTGGTAA

Upstream 100 bases:

>100_bases
CTTACGTTTCGCCCGGAAAAAAATCTCTTTTATTGGCCATTATCAACGGCACTGATACTGTTATCTGTTTTTGTTATTAC
GCTTAAATTAAGGGGATCGT

Downstream 100 bases:

>100_bases
TGCGCATTAAATCATCAATTTTTATCGCCCTGTTTGTAGGATTTTTTTATAGTCAGCTGTTATCAGCCACGCCGCAAGTA
CTTACCTCAGTGAGTAATAA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Von Willebrand Factor Type A; TPR Domain-Containing Protein; BatB Protein; Von Willebrand Factor Type A Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain Protein; Aerotolerance-Related Membrane Protein; Transmembrane Protein; Von Willebrand Factor Type A Domain Protein; TPR Domain Protein In Aerotolerance Operon; Ssl1 Domain Protein; Batb Protein; Unknwon Proteins; BatB/BatC Protein; Transmembrane TPR Repeat-Containing Protein; Tetratricopeptide Repeat And VWA Domain-Containing Protein; Tpr Domain Protein; Tetratricopeptide Repeat Domain Protein; Protein Containing A Von Willebrand Factor Type A Domain

Number of amino acids: Translated: 657; Mature: 657

Protein sequence:

>657_residues
MLPDTSLIPLEFLRPFWLLGLAAVFLLALFRYQTGKKQQHQSLIAAHLSEHLVKVPKNTFSVFLAFNLLAIIACISLSGP
SWRQHDLPVYEMHKAQVIALDLSYSMYATDAKPDRLSQARYKVIDLVKSWEEGEKGLIAYAGDAFTISPLTTDGNAIINH
IPSLSPTIMPVTGSRADLALEQAITLLKNAGYQQGHIVFITDGIDPNSAAIMINRLKGSPWIVSILAMGSQQGAPIKLPE
GGLLKDQAGQIVIPTLNIPPLIDITRASGGLYVNVSNRNTDIEQLSKQFSVNQGVKKESQQQGKNKLAVDDGYWLAFLLM
PLFLLLFRKGLFYTLLLALTLPVATPEVQASIWKNNQQNAFQAYQNQDYAQARELYDSPLEKGSALYKNKQYQQALTKFT
QATINRPESAAAFYNQGNAYAQLHNADKAIAAYQQSLKLNPTLKEAQENIDLLKQLKEQQSKQEDSEQQKNSEQQKNNEQ
QKNSEQQKNNEQQKNSEQQKNSEQQKNNEQQKNNEQQKNNEQQKNNEQQKNNEQQKNNEQQKNNEQQKNNEQQKNSEQQK
NNEQQKNSEQQKNNEQQKNNEQQKNNEQQTNDKQQMTAKEVQSTEQPEVNQELEALPNWLKNMPDDPSILLRNKMRLEYQ
KRAQSNSVQQENNGVIW

Sequences:

>Translated_657_residues
MLPDTSLIPLEFLRPFWLLGLAAVFLLALFRYQTGKKQQHQSLIAAHLSEHLVKVPKNTFSVFLAFNLLAIIACISLSGP
SWRQHDLPVYEMHKAQVIALDLSYSMYATDAKPDRLSQARYKVIDLVKSWEEGEKGLIAYAGDAFTISPLTTDGNAIINH
IPSLSPTIMPVTGSRADLALEQAITLLKNAGYQQGHIVFITDGIDPNSAAIMINRLKGSPWIVSILAMGSQQGAPIKLPE
GGLLKDQAGQIVIPTLNIPPLIDITRASGGLYVNVSNRNTDIEQLSKQFSVNQGVKKESQQQGKNKLAVDDGYWLAFLLM
PLFLLLFRKGLFYTLLLALTLPVATPEVQASIWKNNQQNAFQAYQNQDYAQARELYDSPLEKGSALYKNKQYQQALTKFT
QATINRPESAAAFYNQGNAYAQLHNADKAIAAYQQSLKLNPTLKEAQENIDLLKQLKEQQSKQEDSEQQKNSEQQKNNEQ
QKNSEQQKNNEQQKNSEQQKNSEQQKNNEQQKNNEQQKNNEQQKNNEQQKNNEQQKNNEQQKNNEQQKNNEQQKNSEQQK
NNEQQKNSEQQKNNEQQKNNEQQKNNEQQTNDKQQMTAKEVQSTEQPEVNQELEALPNWLKNMPDDPSILLRNKMRLEYQ
KRAQSNSVQQENNGVIW
>Mature_657_residues
MLPDTSLIPLEFLRPFWLLGLAAVFLLALFRYQTGKKQQHQSLIAAHLSEHLVKVPKNTFSVFLAFNLLAIIACISLSGP
SWRQHDLPVYEMHKAQVIALDLSYSMYATDAKPDRLSQARYKVIDLVKSWEEGEKGLIAYAGDAFTISPLTTDGNAIINH
IPSLSPTIMPVTGSRADLALEQAITLLKNAGYQQGHIVFITDGIDPNSAAIMINRLKGSPWIVSILAMGSQQGAPIKLPE
GGLLKDQAGQIVIPTLNIPPLIDITRASGGLYVNVSNRNTDIEQLSKQFSVNQGVKKESQQQGKNKLAVDDGYWLAFLLM
PLFLLLFRKGLFYTLLLALTLPVATPEVQASIWKNNQQNAFQAYQNQDYAQARELYDSPLEKGSALYKNKQYQQALTKFT
QATINRPESAAAFYNQGNAYAQLHNADKAIAAYQQSLKLNPTLKEAQENIDLLKQLKEQQSKQEDSEQQKNSEQQKNNEQ
QKNSEQQKNNEQQKNSEQQKNSEQQKNNEQQKNNEQQKNNEQQKNNEQQKNNEQQKNNEQQKNNEQQKNNEQQKNSEQQK
NNEQQKNSEQQKNNEQQKNNEQQKNNEQQTNDKQQMTAKEVQSTEQPEVNQELEALPNWLKNMPDDPSILLRNKMRLEYQ
KRAQSNSVQQENNGVIW

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17566482, Length=151, Percent_Identity=28.476821192053, Blast_Score=73, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74739; Mature: 74739

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPDTSLIPLEFLRPFWLLGLAAVFLLALFRYQTGKKQQHQSLIAAHLSEHLVKVPKNTF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHH
SVFLAFNLLAIIACISLSGPSWRQHDLPVYEMHKAQVIALDLSYSMYATDAKPDRLSQAR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCEEEEEEECCEEEECCCCCHHHHHHH
YKVIDLVKSWEEGEKGLIAYAGDAFTISPLTTDGNAIINHIPSLSPTIMPVTGSRADLAL
HHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCCHHHHHHCCCCCCCEEECCCCHHHHHH
EQAITLLKNAGYQQGHIVFITDGIDPNSAAIMINRLKGSPWIVSILAMGSQQGAPIKLPE
HHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCEECCC
GGLLKDQAGQIVIPTLNIPPLIDITRASGGLYVNVSNRNTDIEQLSKQFSVNQGVKKESQ
CCCCCCCCCCEEEECCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHH
QQGKNKLAVDDGYWLAFLLMPLFLLLFRKGLFYTLLLALTLPVATPEVQASIWKNNQQNA
HCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHH
FQAYQNQDYAQARELYDSPLEKGSALYKNKQYQQALTKFTQATINRPESAAAFYNQGNAY
HHHHCCCHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCE
AQLHNADKAIAAYQQSLKLNPTLKEAQENIDLLKQLKEQQSKQEDSEQQKNSEQQKNNEQ
EEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKNSEQQKNNEQQKNSEQQKNSEQQKNNEQQKNNEQQKNNEQQKNNEQQKNNEQQKNNEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKNNEQQKNNEQQKNSEQQKNNEQQKNSEQQKNNEQQKNNEQQKNNEQQTNDKQQMTAKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHH
VQSTEQPEVNQELEALPNWLKNMPDDPSILLRNKMRLEYQKRAQSNSVQQENNGVIW
HHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLPDTSLIPLEFLRPFWLLGLAAVFLLALFRYQTGKKQQHQSLIAAHLSEHLVKVPKNTF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHH
SVFLAFNLLAIIACISLSGPSWRQHDLPVYEMHKAQVIALDLSYSMYATDAKPDRLSQAR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCEEEEEEECCEEEECCCCCHHHHHHH
YKVIDLVKSWEEGEKGLIAYAGDAFTISPLTTDGNAIINHIPSLSPTIMPVTGSRADLAL
HHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCCHHHHHHCCCCCCCEEECCCCHHHHHH
EQAITLLKNAGYQQGHIVFITDGIDPNSAAIMINRLKGSPWIVSILAMGSQQGAPIKLPE
HHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCEECCC
GGLLKDQAGQIVIPTLNIPPLIDITRASGGLYVNVSNRNTDIEQLSKQFSVNQGVKKESQ
CCCCCCCCCCEEEECCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHH
QQGKNKLAVDDGYWLAFLLMPLFLLLFRKGLFYTLLLALTLPVATPEVQASIWKNNQQNA
HCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHH
FQAYQNQDYAQARELYDSPLEKGSALYKNKQYQQALTKFTQATINRPESAAAFYNQGNAY
HHHHCCCHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCE
AQLHNADKAIAAYQQSLKLNPTLKEAQENIDLLKQLKEQQSKQEDSEQQKNSEQQKNNEQ
EEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKNSEQQKNNEQQKNSEQQKNSEQQKNNEQQKNNEQQKNNEQQKNNEQQKNNEQQKNNEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKNNEQQKNNEQQKNSEQQKNNEQQKNSEQQKNNEQQKNNEQQKNNEQQTNDKQQMTAKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHH
VQSTEQPEVNQELEALPNWLKNMPDDPSILLRNKMRLEYQKRAQSNSVQQENNGVIW
HHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA