Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946439
Identifier: 119946439
GI number: 119946439
Start: 3460345
End: 3460851
Strand: Direct
Name: 119946439
Synonym: Ping_2814
Alternate gene names: NA
Gene position: 3460345-3460851 (Clockwise)
Preceding gene: 119946438
Following gene: 119946440
Centisome position: 75.89
GC content: 39.45
Gene sequence:
>507_bases ATGTCTCTGCAAAATAATCAAAATCCACTGGCACAACTCAATGACATACTGGCCCCCTCTTTGCCCTCGTTTTGGCCGCC TGCACTTATTTACTGGTTTTTATTAAGCGCGGTTATTATTTGCCTGCTGGGGTCGGTCTATTTATTCAAAAAGCATAAAA CACAAAAAGTTAAGCAAAAAAAAGCATTAAAGCAGTTAATCCATCTGCAACAATCTAACGCTGACTTCATTACGTTAAAT CAATTACTTAAAGGGGTAGCGCTATTATATTTCCCGCGCGGGCAAGTCGCATCATTACATGGAGAGCAGTGGTTTGATTT TTTACAGTCTTATTCACAAACGCCCCTTTTTAATGATAAACCGCATTTTATAAAACGGCTCTATGACAACCCTGCGCCAG CCTGTTCCAAAGGTGATTTTGAGCAGGCCAAAAAATGGATAACCGGTTTGCATAAACAGATAAAAAAAACACGCGACATA ACCGAAGAGAAACACAATAATGTTTGA
Upstream 100 bases:
>100_bases GCAGCCAGTCAACGCCAGCACAAGGTAGCTAAACTGTTTACAAAACAGGGCATTCCCCTTTATCAGATTTCAGCTGCACG CTCATTATTGGATCAGTTTC
Downstream 100 bases:
>100_bases ATTTATTTATTTATGGATCTTTTTCCTTCTGCCGCTGCCGCTACTCGTCAGGTATTTATTAAAAGCAAAAAAGATAAACT ATACCCAGGTTTGGATCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSLQNNQNPLAQLNDILAPSLPSFWPPALIYWFLLSAVIICLLGSVYLFKKHKTQKVKQKKALKQLIHLQQSNADFITLN QLLKGVALLYFPRGQVASLHGEQWFDFLQSYSQTPLFNDKPHFIKRLYDNPAPACSKGDFEQAKKWITGLHKQIKKTRDI TEEKHNNV
Sequences:
>Translated_168_residues MSLQNNQNPLAQLNDILAPSLPSFWPPALIYWFLLSAVIICLLGSVYLFKKHKTQKVKQKKALKQLIHLQQSNADFITLN QLLKGVALLYFPRGQVASLHGEQWFDFLQSYSQTPLFNDKPHFIKRLYDNPAPACSKGDFEQAKKWITGLHKQIKKTRDI TEEKHNNV >Mature_167_residues SLQNNQNPLAQLNDILAPSLPSFWPPALIYWFLLSAVIICLLGSVYLFKKHKTQKVKQKKALKQLIHLQQSNADFITLNQ LLKGVALLYFPRGQVASLHGEQWFDFLQSYSQTPLFNDKPHFIKRLYDNPAPACSKGDFEQAKKWITGLHKQIKKTRDIT EEKHNNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19387; Mature: 19256
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQNNQNPLAQLNDILAPSLPSFWPPALIYWFLLSAVIICLLGSVYLFKKHKTQKVKQK CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KALKQLIHLQQSNADFITLNQLLKGVALLYFPRGQVASLHGEQWFDFLQSYSQTPLFNDK HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC PHFIKRLYDNPAPACSKGDFEQAKKWITGLHKQIKKTRDITEEKHNNV HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SLQNNQNPLAQLNDILAPSLPSFWPPALIYWFLLSAVIICLLGSVYLFKKHKTQKVKQK CCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KALKQLIHLQQSNADFITLNQLLKGVALLYFPRGQVASLHGEQWFDFLQSYSQTPLFNDK HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC PHFIKRLYDNPAPACSKGDFEQAKKWITGLHKQIKKTRDITEEKHNNV HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA